RNA–Protein interactions for RNA: ENST00000295055.12

CAPN13-201, Transcript of calpain 13, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CAPN13, Length 2,683 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-201ENST00000295055 EHMT2Q96KQ7 1210 aa18.36■□□□□ 0.53
CAPN13-201ENST00000295055 KIF21BO75037 1637 aa18.35■□□□□ 0.53
CAPN13-201ENST00000295055 EIF4G3O43432 1585 aaKnown RBP18.34■□□□□ 0.53
CAPN13-201ENST00000295055 CARMIL1Q5VZK9 1371 aa18.34■□□□□ 0.53
CAPN13-201ENST00000295055 GRIN2BQ13224 1484 aa18.33■□□□□ 0.52
CAPN13-201ENST00000295055 GOLGA3Q08378 1498 aa18.31■□□□□ 0.52
CAPN13-201ENST00000295055 RAPGEF2Q9Y4G8 1499 aa18.31■□□□□ 0.52
CAPN13-201ENST00000295055 PBRM1Q86U86 1689 aa18.31■□□□□ 0.52
CAPN13-201ENST00000295055 CUL7Q14999 1698 aa18.29■□□□□ 0.52
CAPN13-201ENST00000295055 UBE2Q2Q8WVN8 375 aa18.29■□□□□ 0.52
CAPN13-201ENST00000295055 UBTFP17480 764 aaKnown RBP18.26■□□□□ 0.51
CAPN13-201ENST00000295055 FHAD1B1AJZ9 1412 aa18.24■□□□□ 0.51
CAPN13-201ENST00000295055 TNIKQ9UKE5 1360 aa18.23■□□□□ 0.51
CAPN13-201ENST00000295055 SNAPC4Q5SXM2 1469 aa18.23■□□□□ 0.51
CAPN13-201ENST00000295055 ADAMTS12P58397 1594 aa18.21■□□□□ 0.51
CAPN13-201ENST00000295055 MAGI1Q96QZ7 1491 aaPredicted RBP18.21■□□□□ 0.51
CAPN13-201ENST00000295055 SYNJ2O15056 1496 aa18.14■□□□□ 0.5
CAPN13-201ENST00000295055 ZEB1P37275 1124 aaPredicted RBP18.14■□□□□ 0.49
CAPN13-201ENST00000295055 CHMP7Q8WUX9 453 aaPredicted RBP18.12■□□□□ 0.49
CAPN13-201ENST00000295055 GRIN2AQ12879 1464 aa18.1■□□□□ 0.49
CAPN13-201ENST00000295055 CEP162Q5TB80 1403 aa18.09■□□□□ 0.49
CAPN13-201ENST00000295055 FBLN2P98095 1184 aa18.08■□□□□ 0.49
CAPN13-201ENST00000295055 CTTNBP2Q8WZ74 1663 aa18.03■□□□□ 0.48
CAPN13-201ENST00000295055 PODXL2Q9NZ53 605 aa18.02■□□□□ 0.48
CAPN13-201ENST00000295055 CLIP1P30622 1438 aa18.01■□□□□ 0.47
CAPN13-201ENST00000295055 RANGAP1P46060 587 aaPredicted RBP18.01■□□□□ 0.47
CAPN13-201ENST00000295055 NUP160Q12769 1436 aa18■□□□□ 0.47
CAPN13-201ENST00000295055 CEP170Q5SW79 1584 aa17.98■□□□□ 0.47
CAPN13-201ENST00000295055 CHD1O14646 1710 aa17.98■□□□□ 0.47
CAPN13-201ENST00000295055 KIAA0586Q9BVV6 1533 aa17.98■□□□□ 0.47
CAPN13-201ENST00000295055 IQGAP2Q13576 1575 aa17.95■□□□□ 0.46
CAPN13-201ENST00000295055 ARHGAP35Q9NRY4 1499 aa17.93■□□□□ 0.46
CAPN13-201ENST00000295055 SALL2Q9Y467 1007 aaPredicted RBP17.92■□□□□ 0.46
CAPN13-201ENST00000295055 PKNOX2Q96KN3 472 aa17.91■□□□□ 0.46
CAPN13-201ENST00000295055 EFCAB5A4FU69 1503 aa17.88■□□□□ 0.45
CAPN13-201ENST00000295055 UGGT2Q9NYU1 1516 aa17.88■□□□□ 0.45
CAPN13-201ENST00000295055 CCDC136Q96JN2 1154 aa17.88■□□□□ 0.45
CAPN13-201ENST00000295055 ARAP1Q96P48 1450 aa17.88■□□□□ 0.45
CAPN13-201ENST00000295055 JPH4Q96JJ6 628 aa17.86■□□□□ 0.45
CAPN13-201ENST00000295055 SAMD9Q5K651 1589 aa17.86■□□□□ 0.45
CAPN13-201ENST00000295055 P3H3Q8IVL6 736 aa17.85■□□□□ 0.45
CAPN13-201ENST00000295055 VPS8Q8N3P4 1428 aa17.82■□□□□ 0.44
CAPN13-201ENST00000295055 CLASP1Q7Z460 1538 aa17.81■□□□□ 0.44
CAPN13-201ENST00000295055 FHOD3Q2V2M9 1422 aa17.81■□□□□ 0.44
CAPN13-201ENST00000295055 DISP1Q96F81 1524 aa17.81■□□□□ 0.44
CAPN13-201ENST00000295055 OSCARQ8IYS5 282 aa17.8■□□□□ 0.44
CAPN13-201ENST00000295055 TSHZ2Q9NRE2 1034 aa17.79■□□□□ 0.44
CAPN13-201ENST00000295055 KIAA0556O60303 1618 aa17.77■□□□□ 0.44
CAPN13-201ENST00000295055 SHROOM2Q13796 1616 aa17.77■□□□□ 0.44
CAPN13-201ENST00000295055 CARMIL2Q6F5E8 1435 aa17.76■□□□□ 0.43
CAPN13-201ENST00000295055 PRG4Q92954 1404 aaPredicted RBP17.75■□□□□ 0.43
CAPN13-201ENST00000295055 FMN1Q68DA7 1419 aa17.73■□□□□ 0.43
CAPN13-201ENST00000295055 CASKIN1Q8WXD9 1431 aa17.67■□□□□ 0.42
CAPN13-201ENST00000295055 ERCC6L2Q5T890 1561 aa17.66■□□□□ 0.42
CAPN13-201ENST00000295055 PCF11O94913 1555 aaKnown RBP17.65■□□□□ 0.42
CAPN13-201ENST00000295055 FYCO1Q9BQS8 1478 aa17.64■□□□□ 0.41
CAPN13-201ENST00000295055 PTPRGP23470 1445 aa17.62■□□□□ 0.41
CAPN13-201ENST00000295055 ATP1B4Q9UN42 357 aaPredicted RBP17.61■□□□□ 0.41
CAPN13-201ENST00000295055 TRIM26Q12899 539 aaPredicted RBP17.58■□□□□ 0.4
CAPN13-201ENST00000295055 PLB1Q6P1J6 1458 aa17.58■□□□□ 0.4
CAPN13-201ENST00000295055 MAP3K1Q13233 1512 aa17.57■□□□□ 0.4
CAPN13-201ENST00000295055 RAPGEF6Q8TEU7 1601 aa17.56■□□□□ 0.4
CAPN13-201ENST00000295055 HECW1Q76N89 1606 aa17.55■□□□□ 0.4
CAPN13-201ENST00000295055 ABCA8O94911 1581 aa17.54■□□□□ 0.4
CAPN13-201ENST00000295055 TIAM1Q13009 1591 aa17.54■□□□□ 0.4
CAPN13-201ENST00000295055 KANK4Q5T7N3 995 aaPredicted RBP17.54■□□□□ 0.4
CAPN13-201ENST00000295055 NUP153P49790 1475 aaKnown RBP17.53■□□□□ 0.4
CAPN13-201ENST00000295055 LRRIQ1Q96JM4 1722 aa17.52■□□□□ 0.4
CAPN13-201ENST00000295055 EPRSP07814 1512 aaKnown RBP17.52■□□□□ 0.39
CAPN13-201ENST00000295055 UACAQ9BZF9 1416 aa17.51■□□□□ 0.39
CAPN13-201ENST00000295055 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.51■□□□□ 0.39
CAPN13-201ENST00000295055 CCDC18Q5T9S5 1454 aa17.51■□□□□ 0.39
CAPN13-201ENST00000295055 ERICH6BQ5W0A0 696 aa17.51■□□□□ 0.39
CAPN13-201ENST00000295055 CFAP43Q8NDM7 1665 aa17.5■□□□□ 0.39
CAPN13-201ENST00000295055 DIEXFQ68CQ4 756 aaKnown RBP17.48■□□□□ 0.39
CAPN13-201ENST00000295055 ARHGEF11O15085 1522 aa17.48■□□□□ 0.39
CAPN13-201ENST00000295055 LRRC9Q6ZRR7 1453 aa17.48■□□□□ 0.39
CAPN13-201ENST00000295055 ARID3CA6NKF2 412 aa17.47■□□□□ 0.39
CAPN13-201ENST00000295055 AEBP2Q6ZN18 517 aaPredicted RBP17.47■□□□□ 0.39
CAPN13-201ENST00000295055 CDK13Q14004 1512 aaKnown RBP17.47■□□□□ 0.39
CAPN13-201ENST00000295055 ABCC2Q92887 1545 aa17.45■□□□□ 0.38
CAPN13-201ENST00000295055 UHRF1BP1LA0JNW5 1464 aa17.45■□□□□ 0.38
CAPN13-201ENST00000295055 ATP10BO94823 1461 aa17.44■□□□□ 0.38
CAPN13-201ENST00000295055 KLHL34Q8N239 644 aa17.44■□□□□ 0.38
CAPN13-201ENST00000295055 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.42■□□□□ 0.38
CAPN13-201ENST00000295055 HNRNPUL2Q1KMD3 747 aaKnown RBP17.42■□□□□ 0.38
CAPN13-201ENST00000295055 MTUS2Q5JR59 1369 aa17.41■□□□□ 0.38
CAPN13-201ENST00000295055 MAGI3Q5TCQ9 1506 aa17.41■□□□□ 0.38
CAPN13-201ENST00000295055 CDK11AQ9UQ88 783 aaPredicted RBP17.4■□□□□ 0.38
CAPN13-201ENST00000295055 RIMBP3CA6NJZ7 1639 aa17.4■□□□□ 0.38
CAPN13-201ENST00000295055 RIMBP3BA6NNM3 1639 aa17.4■□□□□ 0.38
CAPN13-201ENST00000295055 RIMBP3Q9UFD9 1639 aa17.4■□□□□ 0.38
CAPN13-201ENST00000295055 YTHDC1Q96MU7 727 aaKnown RBP17.4■□□□□ 0.38
CAPN13-201ENST00000295055 DEKP35659 375 aaKnown RBP17.38■□□□□ 0.37
CAPN13-201ENST00000295055 SUPT16HQ9Y5B9 1047 aaKnown RBP17.38■□□□□ 0.37
CAPN13-201ENST00000295055 ADCY10Q96PN6 1610 aa17.37■□□□□ 0.37
CAPN13-201ENST00000295055 EHBP1L1Q8N3D4 1523 aa17.37■□□□□ 0.37
CAPN13-201ENST00000295055 KDM5BQ9UGL1 1544 aa17.37■□□□□ 0.37
CAPN13-201ENST00000295055 NCBP3Q53F19 620 aaKnown RBP17.36■□□□□ 0.37
CAPN13-201ENST00000295055 PLEKHD1A6NEE1 506 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms