RNA–Protein interactions for RNA: ENST00000295055.12

CAPN13-201, Transcript of calpain 13, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CAPN13, Length 2,683 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-201ENST00000295055 NISCHQ9Y2I1 1504 aa26.19■■□□□ 1.78
CAPN13-201ENST00000295055 CCDC180Q9P1Z9 1646 aa22.94■■□□□ 1.26
CAPN13-201ENST00000295055 ABCC9O60706 1549 aa21.93■■□□□ 1.1
CAPN13-201ENST00000295055 ZCCHC6Q5VYS8 1495 aaKnown RBP21.93■■□□□ 1.1
CAPN13-201ENST00000295055 DCAF8L2P0C7V8 631 aa21.69■■□□□ 1.06
CAPN13-201ENST00000295055 DCAF1Q9Y4B6 1507 aa21.67■■□□□ 1.06
CAPN13-201ENST00000295055 PELP1Q8IZL8 1130 aaKnown RBP21.6■■□□□ 1.05
CAPN13-201ENST00000295055 MYO15BQ96JP2 1530 aa21.53■■□□□ 1.04
CAPN13-201ENST00000295055 NACADO15069 1562 aa21.46■■□□□ 1.03
CAPN13-201ENST00000295055 RB1CC1Q8TDY2 1594 aa21.32■■□□□ 1
CAPN13-201ENST00000295055 MYT1Q01538 1121 aa21.22■□□□□ 0.99
CAPN13-201ENST00000295055 SHROOM4Q9ULL8 1493 aa21.11■□□□□ 0.97
CAPN13-201ENST00000295055 SCRIBQ14160 1630 aa21.03■□□□□ 0.96
CAPN13-201ENST00000295055 UNC13AQ9UPW8 1703 aa20.85■□□□□ 0.93
CAPN13-201ENST00000295055 BICRAQ9NZM4 1560 aa20.69■□□□□ 0.9
CAPN13-201ENST00000295055 PABPN1Q86U42 306 aaKnown RBP eCLIP20.64■□□□□ 0.9
CAPN13-201ENST00000295055 TTBK1Q5TCY1 1321 aaPredicted RBP20.46■□□□□ 0.87
CAPN13-201ENST00000295055 PRKCSHP14314 528 aaPredicted RBP20.41■□□□□ 0.86
CAPN13-201ENST00000295055 CECR2Q9BXF3 1484 aa20.36■□□□□ 0.85
CAPN13-201ENST00000295055 BAZ1AQ9NRL2 1556 aaPredicted RBP20.23■□□□□ 0.83
CAPN13-201ENST00000295055 RSF1Q96T23 1441 aaPredicted RBP20.21■□□□□ 0.83
CAPN13-201ENST00000295055 MROH2BQ7Z745 1585 aa20.21■□□□□ 0.83
CAPN13-201ENST00000295055 SUPT5HO00267 1087 aaKnown RBP20.19■□□□□ 0.82
CAPN13-201ENST00000295055 SMARCA4P51532 1647 aa20.16■□□□□ 0.82
CAPN13-201ENST00000295055 EIF4G1Q04637 1599 aaKnown RBP20.08■□□□□ 0.81
CAPN13-201ENST00000295055 WIZO95785 1651 aa20.01■□□□□ 0.79
CAPN13-201ENST00000295055 PEG3Q9GZU2 1588 aa19.96■□□□□ 0.79
CAPN13-201ENST00000295055 ATAD2BQ9ULI0 1458 aa19.93■□□□□ 0.78
CAPN13-201ENST00000295055 HRCP23327 699 aa19.91■□□□□ 0.78
CAPN13-201ENST00000295055 SMARCA2P51531 1590 aa19.9■□□□□ 0.78
CAPN13-201ENST00000295055 CC2D2AQ9P2K1 1620 aa19.85■□□□□ 0.77
CAPN13-201ENST00000295055 NCAPD3P42695 1498 aa19.82■□□□□ 0.76
CAPN13-201ENST00000295055 APLP2Q06481 763 aa19.81■□□□□ 0.76
CAPN13-201ENST00000295055 TOP2AP11388 1531 aaKnown RBP19.81■□□□□ 0.76
CAPN13-201ENST00000295055 SCAF1Q9H7N4 1312 aaKnown RBP19.8■□□□□ 0.76
CAPN13-201ENST00000295055 BAZ1BQ9UIG0 1483 aaKnown RBP19.78■□□□□ 0.76
CAPN13-201ENST00000295055 BCL11AQ9H165 835 aa19.78■□□□□ 0.76
CAPN13-201ENST00000295055 SLC24A1O60721 1099 aa19.75■□□□□ 0.75
CAPN13-201ENST00000295055 HMGXB3Q12766 1538 aa19.75■□□□□ 0.75
CAPN13-201ENST00000295055 ERICH6Q7L0X2 663 aa19.69■□□□□ 0.74
CAPN13-201ENST00000295055 DNAJC5BQ9UF47 199 aa19.64■□□□□ 0.73
CAPN13-201ENST00000295055 CCDC88BA6NC98 1476 aa19.62■□□□□ 0.73
CAPN13-201ENST00000295055 FAM9AQ8IZU1 332 aaPredicted RBP19.59■□□□□ 0.73
CAPN13-201ENST00000295055 PPARGC1BQ86YN6 1023 aaKnown RBP19.47■□□□□ 0.71
CAPN13-201ENST00000295055 CFTRP13569 1480 aa19.29■□□□□ 0.68
CAPN13-201ENST00000295055 CADPSQ9ULU8 1353 aa19.29■□□□□ 0.68
CAPN13-201ENST00000295055 CHIC1Q5VXU3 224 aa19.21■□□□□ 0.67
CAPN13-201ENST00000295055 NESP48681 1621 aa19.17■□□□□ 0.66
CAPN13-201ENST00000295055 LAMC3Q9Y6N6 1575 aa19.17■□□□□ 0.66
CAPN13-201ENST00000295055 PRDM2Q13029 1718 aa19.13■□□□□ 0.65
CAPN13-201ENST00000295055 ABCC8Q09428 1581 aa19.08■□□□□ 0.64
CAPN13-201ENST00000295055 FANCD2Q9BXW9 1451 aa19.05■□□□□ 0.64
CAPN13-201ENST00000295055 PDS5BQ9NTI5 1447 aa19.04■□□□□ 0.64
CAPN13-201ENST00000295055 TRIM41Q8WV44 630 aa19.03■□□□□ 0.64
CAPN13-201ENST00000295055 WRNQ14191 1432 aaPredicted RBP eCLIP19.02■□□□□ 0.63
CAPN13-201ENST00000295055 CEP164Q9UPV0 1460 aa18.95■□□□□ 0.62
CAPN13-201ENST00000295055 CENPBP07199 599 aaPredicted RBP18.93■□□□□ 0.62
CAPN13-201ENST00000295055 SYNJ1O43426 1573 aa18.93■□□□□ 0.62
CAPN13-201ENST00000295055 KIF21AQ7Z4S6 1674 aa18.92■□□□□ 0.62
CAPN13-201ENST00000295055 CUX1P39880 1505 aa18.91■□□□□ 0.62
CAPN13-201ENST00000295055 TOP2BQ02880 1626 aa18.89■□□□□ 0.62
CAPN13-201ENST00000295055 DAXXQ9UER7 740 aaPredicted RBP18.88■□□□□ 0.61
CAPN13-201ENST00000295055 BIVM-ERCC5R4GMW8 1640 aa18.87■□□□□ 0.61
CAPN13-201ENST00000295055 ERCC6Q03468 1493 aa18.83■□□□□ 0.61
CAPN13-201ENST00000295055 URB2Q14146 1524 aaKnown RBP18.83■□□□□ 0.6
CAPN13-201ENST00000295055 DNMBPQ6XZF7 1577 aa18.82■□□□□ 0.6
CAPN13-201ENST00000295055 TOPBP1Q92547 1522 aa18.81■□□□□ 0.6
CAPN13-201ENST00000295055 MRC2Q9UBG0 1479 aa18.8■□□□□ 0.6
CAPN13-201ENST00000295055 ACIN1Q9UKV3 1341 aaKnown RBP18.75■□□□□ 0.59
CAPN13-201ENST00000295055 FGD5Q6ZNL6 1462 aa18.74■□□□□ 0.59
CAPN13-201ENST00000295055 WDR62O43379 1518 aa18.71■□□□□ 0.59
CAPN13-201ENST00000295055 THOC2Q8NI27 1593 aaKnown RBP18.7■□□□□ 0.58
CAPN13-201ENST00000295055 POLA1P09884 1462 aaPredicted RBP18.7■□□□□ 0.58
CAPN13-201ENST00000295055 SOGA1O94964 1423 aa18.69■□□□□ 0.58
CAPN13-201ENST00000295055 GTF3C3Q9Y5Q9 886 aa18.67■□□□□ 0.58
CAPN13-201ENST00000295055 EIF5BO60841 1220 aaKnown RBP18.65■□□□□ 0.58
CAPN13-201ENST00000295055 NEUROD1Q13562 356 aa18.64■□□□□ 0.57
CAPN13-201ENST00000295055 PCGF6Q9BYE7 350 aa18.64■□□□□ 0.57
CAPN13-201ENST00000295055 RAD54L2Q9Y4B4 1467 aa18.64■□□□□ 0.57
CAPN13-201ENST00000295055 RUSC2Q8N2Y8 1516 aa18.63■□□□□ 0.57
CAPN13-201ENST00000295055 ANP32EQ9BTT0 268 aa18.61■□□□□ 0.57
CAPN13-201ENST00000295055 EEA1Q15075 1411 aa18.6■□□□□ 0.57
CAPN13-201ENST00000295055 CUX2O14529 1486 aa18.59■□□□□ 0.57
CAPN13-201ENST00000295055 ABCA10Q8WWZ4 1543 aa18.59■□□□□ 0.57
CAPN13-201ENST00000295055 KIF27Q86VH2 1401 aa18.56■□□□□ 0.56
CAPN13-201ENST00000295055 TARBP1Q13395 1621 aaKnown RBP18.55■□□□□ 0.56
CAPN13-201ENST00000295055 CSRNP3Q8WYN3 585 aa18.54■□□□□ 0.56
CAPN13-201ENST00000295055 IFT140Q96RY7 1462 aa18.53■□□□□ 0.56
CAPN13-201ENST00000295055 WDR97A6NE52 1622 aa18.52■□□□□ 0.56
CAPN13-201ENST00000295055 TDRD9Q8NDG6 1382 aaKnown RBP18.48■□□□□ 0.55
CAPN13-201ENST00000295055 PLEKHG5O94827 1062 aa18.46■□□□□ 0.55
CAPN13-201ENST00000295055 IGF1RP08069 1367 aa18.46■□□□□ 0.55
CAPN13-201ENST00000295055 LOC105371045A0A1W2PR82 267 aa18.46■□□□□ 0.54
CAPN13-201ENST00000295055 ABCA5Q8WWZ7 1642 aa18.44■□□□□ 0.54
CAPN13-201ENST00000295055 ZNF608Q9ULD9 1512 aaPredicted RBP18.43■□□□□ 0.54
CAPN13-201ENST00000295055 GAPVD1Q14C86 1478 aa18.43■□□□□ 0.54
CAPN13-201ENST00000295055 AQRO60306 1485 aaKnown RBP eCLIP18.42■□□□□ 0.54
CAPN13-201ENST00000295055 PRXQ9BXM0 1461 aa18.38■□□□□ 0.53
CAPN13-201ENST00000295055 ANO8Q9HCE9 1232 aaPredicted RBP18.38■□□□□ 0.53
CAPN13-201ENST00000295055 ERICH3Q5RHP9 1530 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms