RNA–Protein interactions for RNA: ENST00000294172.6

NXF1-201, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF1, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-201ENST00000294172 TARBP1Q13395 1621 aaKnown RBP20.95■□□□□ 0.94
NXF1-201ENST00000294172 MRC2Q9UBG0 1479 aa20.95■□□□□ 0.94
NXF1-201ENST00000294172 TIAM1Q13009 1591 aa20.94■□□□□ 0.94
NXF1-201ENST00000294172 CTTNBP2Q8WZ74 1663 aa20.93■□□□□ 0.94
NXF1-201ENST00000294172 RRBP1Q9P2E9 1410 aaKnown RBP20.93■□□□□ 0.94
NXF1-201ENST00000294172 EFCAB5A4FU69 1503 aa20.92■□□□□ 0.94
NXF1-201ENST00000294172 MAP3K1Q13233 1512 aa20.91■□□□□ 0.94
NXF1-201ENST00000294172 CCNB3Q8WWL7 1395 aa20.9■□□□□ 0.94
NXF1-201ENST00000294172 PCF11O94913 1555 aaKnown RBP20.9■□□□□ 0.94
NXF1-201ENST00000294172 AQRO60306 1485 aaKnown RBP eCLIP20.89■□□□□ 0.932e-7■■■□□ 19.2
NXF1-201ENST00000294172 LRRC9Q6ZRR7 1453 aa20.88■□□□□ 0.93
NXF1-201ENST00000294172 ITGAEP38570 1179 aa20.87■□□□□ 0.93
NXF1-201ENST00000294172 FYCO1Q9BQS8 1478 aa20.82■□□□□ 0.92
NXF1-201ENST00000294172 CASKIN1Q8WXD9 1431 aa20.82■□□□□ 0.92
NXF1-201ENST00000294172 FMN1Q68DA7 1419 aa20.81■□□□□ 0.92
NXF1-201ENST00000294172 PBRM1Q86U86 1689 aa20.8■□□□□ 0.92
NXF1-201ENST00000294172 PHLDB1Q86UU1 1377 aa20.79■□□□□ 0.92
NXF1-201ENST00000294172 CFAP43Q8NDM7 1665 aa20.79■□□□□ 0.92
NXF1-201ENST00000294172 ERCC6Q03468 1493 aa20.78■□□□□ 0.92
NXF1-201ENST00000294172 IFT140Q96RY7 1462 aa20.77■□□□□ 0.92
NXF1-201ENST00000294172 WDR62O43379 1518 aa20.77■□□□□ 0.92
NXF1-201ENST00000294172 ZNF608Q9ULD9 1512 aaPredicted RBP20.77■□□□□ 0.92
NXF1-201ENST00000294172 GRIN2BQ13224 1484 aa20.76■□□□□ 0.91
NXF1-201ENST00000294172 SAMD9Q5K651 1589 aa20.75■□□□□ 0.91
NXF1-201ENST00000294172 FAM50AQ14320 339 aaKnown RBP20.75■□□□□ 0.91
NXF1-201ENST00000294172 DHX57Q6P158 1386 aaKnown RBP20.74■□□□□ 0.91
NXF1-201ENST00000294172 ADAMTS12P58397 1594 aa20.73■□□□□ 0.91
NXF1-201ENST00000294172 SNAPC4Q5SXM2 1469 aa20.72■□□□□ 0.91
NXF1-201ENST00000294172 DIEXFQ68CQ4 756 aaKnown RBP20.69■□□□□ 0.9
NXF1-201ENST00000294172 ZNF316A6NFI3 1004 aaPredicted RBP20.67■□□□□ 0.9
NXF1-201ENST00000294172 MTUS2Q5JR59 1369 aa20.67■□□□□ 0.9
NXF1-201ENST00000294172 CLSPNQ9HAW4 1339 aa20.66■□□□□ 0.9
NXF1-201ENST00000294172 IQGAP2Q13576 1575 aa20.65■□□□□ 0.9
NXF1-201ENST00000294172 RAB3GAP2Q9H2M9 1393 aa20.63■□□□□ 0.89
NXF1-201ENST00000294172 EIF4G3O43432 1585 aaKnown RBP20.6■□□□□ 0.89
NXF1-201ENST00000294172 THOC2Q8NI27 1593 aaKnown RBP20.59■□□□□ 0.89
NXF1-201ENST00000294172 LRRIQ1Q96JM4 1722 aa20.58■□□□□ 0.89
NXF1-201ENST00000294172 SETD5Q9C0A6 1442 aa20.58■□□□□ 0.88
NXF1-201ENST00000294172 FGD6Q6ZV73 1430 aa20.55■□□□□ 0.88
NXF1-201ENST00000294172 ARID3CA6NKF2 412 aa20.54■□□□□ 0.88
NXF1-201ENST00000294172 GRIN2AQ12879 1464 aa20.53■□□□□ 0.88
NXF1-201ENST00000294172 FBLN2P98095 1184 aa20.53■□□□□ 0.88
NXF1-201ENST00000294172 CHMP7Q8WUX9 453 aaPredicted RBP20.53■□□□□ 0.88
NXF1-201ENST00000294172 KIAA0586Q9BVV6 1533 aa20.52■□□□□ 0.88
NXF1-201ENST00000294172 NCOA2Q15596 1464 aa20.52■□□□□ 0.88
NXF1-201ENST00000294172 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.52■□□□□ 0.88
NXF1-201ENST00000294172 UGGT2Q9NYU1 1516 aa20.52■□□□□ 0.88
NXF1-201ENST00000294172 CCDC18Q5T9S5 1454 aa20.5■□□□□ 0.87
NXF1-201ENST00000294172 EHBP1L1Q8N3D4 1523 aa20.49■□□□□ 0.87
NXF1-201ENST00000294172 HECW1Q76N89 1606 aa20.49■□□□□ 0.87
NXF1-201ENST00000294172 MAGI1Q96QZ7 1491 aaPredicted RBP20.48■□□□□ 0.87
NXF1-201ENST00000294172 MYOM3Q5VTT5 1437 aa20.47■□□□□ 0.87
NXF1-201ENST00000294172 SUPT6HQ7KZ85 1726 aaKnown RBP20.47■□□□□ 0.87
NXF1-201ENST00000294172 MAGI3Q5TCQ9 1506 aa20.47■□□□□ 0.87
NXF1-201ENST00000294172 EPRSP07814 1512 aaKnown RBP20.46■□□□□ 0.87
NXF1-201ENST00000294172 DISP1Q96F81 1524 aa20.45■□□□□ 0.86
NXF1-201ENST00000294172 SYNJ2O15056 1496 aa20.44■□□□□ 0.86
NXF1-201ENST00000294172 CDK13Q14004 1512 aaKnown RBP20.44■□□□□ 0.86
NXF1-201ENST00000294172 MAPKBP1O60336 1514 aa20.43■□□□□ 0.86
NXF1-201ENST00000294172 KIAA0556O60303 1618 aa20.43■□□□□ 0.86
NXF1-201ENST00000294172 PTPRKQ15262 1439 aa20.4■□□□□ 0.86
NXF1-201ENST00000294172 CEP170Q5SW79 1584 aa20.39■□□□□ 0.85
NXF1-201ENST00000294172 ARHGEF11O15085 1522 aa20.38■□□□□ 0.85
NXF1-201ENST00000294172 NEUROD1Q13562 356 aa20.36■□□□□ 0.85
NXF1-201ENST00000294172 PTPN23Q9H3S7 1636 aa20.35■□□□□ 0.85
NXF1-201ENST00000294172 SIN3AQ96ST3 1273 aa20.35■□□□□ 0.85
NXF1-201ENST00000294172 JPH4Q96JJ6 628 aa20.33■□□□□ 0.84
NXF1-201ENST00000294172 HFM1A2PYH4 1435 aa20.32■□□□□ 0.84
NXF1-201ENST00000294172 NUP153P49790 1475 aaKnown RBP20.32■□□□□ 0.84
NXF1-201ENST00000294172 CHIC2Q9UKJ5 165 aa20.31■□□□□ 0.84
NXF1-201ENST00000294172 NUP160Q12769 1436 aa20.3■□□□□ 0.84
NXF1-201ENST00000294172 RAPGEF6Q8TEU7 1601 aa20.3■□□□□ 0.84
NXF1-201ENST00000294172 MIER1Q8N108 512 aa20.29■□□□□ 0.84
NXF1-201ENST00000294172 CDK11AQ9UQ88 783 aaPredicted RBP20.28■□□□□ 0.84
NXF1-201ENST00000294172 CARMIL2Q6F5E8 1435 aa20.28■□□□□ 0.84
NXF1-201ENST00000294172 NAIPQ13075 1403 aa20.27■□□□□ 0.84
NXF1-201ENST00000294172 RRP7BPQ9NSQ0 103 aa20.27■□□□□ 0.84
NXF1-201ENST00000294172 TCOF1Q13428 1488 aaKnown RBP20.27■□□□□ 0.84
NXF1-201ENST00000294172 SCAF1Q9H7N4 1312 aaKnown RBP20.27■□□□□ 0.84
NXF1-201ENST00000294172 PLB1Q6P1J6 1458 aa20.26■□□□□ 0.83
NXF1-201ENST00000294172 MIA2Q96PC5 1412 aa20.25■□□□□ 0.83
NXF1-201ENST00000294172 UACAQ9BZF9 1416 aa20.22■□□□□ 0.83
NXF1-201ENST00000294172 PRG4Q92954 1404 aaPredicted RBP20.2■□□□□ 0.82
NXF1-201ENST00000294172 CENPBP07199 599 aaPredicted RBP20.18■□□□□ 0.82
NXF1-201ENST00000294172 ZNF644Q9H582 1327 aaPredicted RBP20.18■□□□□ 0.82
NXF1-201ENST00000294172 TIMELESSQ9UNS1 1208 aa20.18■□□□□ 0.82
NXF1-201ENST00000294172 YTHDC1Q96MU7 727 aaKnown RBP20.17■□□□□ 0.82
NXF1-201ENST00000294172 ACIN1Q9UKV3 1341 aaKnown RBP20.17■□□□□ 0.82
NXF1-201ENST00000294172 TROQ12816 1431 aaPredicted RBP20.16■□□□□ 0.82
NXF1-201ENST00000294172 TRIM52Q96A61 297 aa20.15■□□□□ 0.82
NXF1-201ENST00000294172 CFDP1Q9UEE9 299 aaPredicted RBP20.12■□□□□ 0.81
NXF1-201ENST00000294172 DAPK1P53355 1430 aa20.11■□□□□ 0.81
NXF1-201ENST00000294172 TONSLQ96HA7 1378 aa20.11■□□□□ 0.81
NXF1-201ENST00000294172 PPP1R15AO75807 674 aaPredicted RBP20.11■□□□□ 0.81
NXF1-201ENST00000294172 AKNAQ7Z591 1439 aa20.11■□□□□ 0.81
NXF1-201ENST00000294172 ZNF777Q9ULD5 760 aaPredicted RBP20.1■□□□□ 0.81
NXF1-201ENST00000294172 GCC2Q8IWJ2 1684 aa20.1■□□□□ 0.81
NXF1-201ENST00000294172 PLEKHD1A6NEE1 506 aa20.09■□□□□ 0.81
NXF1-201ENST00000294172 ABCC5O15440 1437 aa20.09■□□□□ 0.81
NXF1-201ENST00000294172 KDM6BO15054 1643 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms