RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 PRG4Q92954 1404 aaPredicted RBP44.06■■■■■ 4.64
U2AF1-201ENST00000291552 JPH4Q96JJ6 628 aa43.99■■■■■ 4.63
U2AF1-201ENST00000291552 KIAA0586Q9BVV6 1533 aa43.88■■■■■ 4.61
U2AF1-201ENST00000291552 CARMIL1Q5VZK9 1371 aa43.79■■■■■ 4.6
U2AF1-201ENST00000291552 KIF13AQ9H1H9 1805 aa43.68■■■■■ 4.58
U2AF1-201ENST00000291552 ADCY10Q96PN6 1610 aa43.65■■■■■ 4.58
U2AF1-201ENST00000291552 IQGAP2Q13576 1575 aa43.55■■■■■ 4.56
U2AF1-201ENST00000291552 MAPKBP1O60336 1514 aa43.48■■■■■ 4.55
U2AF1-201ENST00000291552 RAPGEF2Q9Y4G8 1499 aa43.45■■■■■ 4.55
U2AF1-201ENST00000291552 ABCC10Q5T3U5 1492 aa43.37■■■■■ 4.53
U2AF1-201ENST00000291552 PTPRGP23470 1445 aa43.36■■■■■ 4.53
U2AF1-201ENST00000291552 CARMIL2Q6F5E8 1435 aa43.36■■■■■ 4.53
U2AF1-201ENST00000291552 DIP2BQ9P265 1576 aa43.36■■■■■ 4.53
U2AF1-201ENST00000291552 DISP1Q96F81 1524 aa43.34■■■■■ 4.53
U2AF1-201ENST00000291552 TNIKQ9UKE5 1360 aa43.33■■■■■ 4.53
U2AF1-201ENST00000291552 NPM1P06748 294 aaKnown RBP eCLIP43.31■■■■■ 4.52
U2AF1-201ENST00000291552 UGGT2Q9NYU1 1516 aa43.28■■■■■ 4.52
U2AF1-201ENST00000291552 CTTNBP2Q8WZ74 1663 aa43.24■■■■■ 4.51
U2AF1-201ENST00000291552 TTBK1Q5TCY1 1321 aaPredicted RBP43.22■■■■■ 4.51
U2AF1-201ENST00000291552 FAM69CQ0P6D2 419 aa43.21■■■■■ 4.51
U2AF1-201ENST00000291552 KIAA0556O60303 1618 aa43.19■■■■■ 4.51
U2AF1-201ENST00000291552 ABCC2Q92887 1545 aa43.17■■■■■ 4.5
U2AF1-201ENST00000291552 UHRF1BP1LA0JNW5 1464 aa43.13■■■■■ 4.5
U2AF1-201ENST00000291552 PRXQ9BXM0 1461 aa43.13■■■■■ 4.49
U2AF1-201ENST00000291552 UACAQ9BZF9 1416 aa43.08■■■■■ 4.49
U2AF1-201ENST00000291552 TSPOAP1O95153 1857 aa43.06■■■■■ 4.48
U2AF1-201ENST00000291552 ASXL2Q76L83 1435 aa42.99■■■■■ 4.47
U2AF1-201ENST00000291552 KDM5BQ9UGL1 1544 aa42.95■■■■■ 4.47
U2AF1-201ENST00000291552 PLB1Q6P1J6 1458 aa42.93■■■■■ 4.46
U2AF1-201ENST00000291552 ZCCHC11Q5TAX3 1644 aaKnown RBP42.93■■■■■ 4.46
U2AF1-201ENST00000291552 GLI2P10070 1586 aa42.89■■■■■ 4.46
U2AF1-201ENST00000291552 PPRC1Q5VV67 1664 aaKnown RBP42.88■■■■■ 4.45
U2AF1-201ENST00000291552 GOLGA3Q08378 1498 aa42.86■■■■■ 4.45
U2AF1-201ENST00000291552 KDM6BO15054 1643 aa42.86■■■■■ 4.45
U2AF1-201ENST00000291552 ABCA8O94911 1581 aa42.78■■■■■ 4.44
U2AF1-201ENST00000291552 EPRSP07814 1512 aaKnown RBP42.76■■■■■ 4.44
U2AF1-201ENST00000291552 CSRNP3Q8WYN3 585 aa42.72■■■■■ 4.43
U2AF1-201ENST00000291552 MAP3K4Q9Y6R4 1608 aa42.71■■■■■ 4.43
U2AF1-201ENST00000291552 AEBP2Q6ZN18 517 aaPredicted RBP42.71■■■■■ 4.43
U2AF1-201ENST00000291552 EEA1Q15075 1411 aa42.63■■■■■ 4.42
U2AF1-201ENST00000291552 WDR7Q9Y4E6 1490 aa42.62■■■■■ 4.41
U2AF1-201ENST00000291552 SAMD9Q5K651 1589 aa42.61■■■■■ 4.41
U2AF1-201ENST00000291552 P3H3Q8IVL6 736 aa42.48■■■■■ 4.39
U2AF1-201ENST00000291552 COL17A1Q9UMD9 1497 aaPredicted RBP42.46■■■■■ 4.39
U2AF1-201ENST00000291552 TEX14Q8IWB6 1497 aa42.43■■■■■ 4.38
U2AF1-201ENST00000291552 CFAP43Q8NDM7 1665 aa42.42■■■■■ 4.38
U2AF1-201ENST00000291552 KIF21BO75037 1637 aa42.41■■■■■ 4.38
U2AF1-201ENST00000291552 FAM9AQ8IZU1 332 aaPredicted RBP42.4■■■■■ 4.38
U2AF1-201ENST00000291552 RAPGEF6Q8TEU7 1601 aa42.35■■■■■ 4.37
U2AF1-201ENST00000291552 ATP10BO94823 1461 aa42.35■■■■■ 4.37
U2AF1-201ENST00000291552 MAGI3Q5TCQ9 1506 aa42.3■■■■■ 4.36
U2AF1-201ENST00000291552 ARID3CA6NKF2 412 aa42.29■■■■■ 4.36
U2AF1-201ENST00000291552 KCNH8Q96L42 1107 aa42.28■■■■■ 4.36
U2AF1-201ENST00000291552 CD109Q6YHK3 1445 aa42.28■■■■■ 4.36
U2AF1-201ENST00000291552 KDM4FA0A1W2PPD8 638 aa42.26■■■■■ 4.36
U2AF1-201ENST00000291552 FHOD3Q2V2M9 1422 aa42.25■■■■■ 4.35
U2AF1-201ENST00000291552 CHIC1Q5VXU3 224 aa42.22■■■■■ 4.35
U2AF1-201ENST00000291552 NUP153P49790 1475 aaKnown RBP42.19■■■■■ 4.34
U2AF1-201ENST00000291552 RANGAP1P46060 587 aaPredicted RBP42.19■■■■■ 4.34
U2AF1-201ENST00000291552 EFCAB5A4FU69 1503 aa42.15■■■■■ 4.34
U2AF1-201ENST00000291552 ABCA9Q8IUA7 1624 aa42.15■■■■■ 4.34
U2AF1-201ENST00000291552 ADGRL1O94910 1474 aa42.04■■■■■ 4.32
U2AF1-201ENST00000291552 ARAP3Q8WWN8 1544 aa41.96■■■■■ 4.31
U2AF1-201ENST00000291552 EHMT2Q96KQ7 1210 aa41.94■■■■■ 4.3
U2AF1-201ENST00000291552 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP41.92■■■■■ 4.3
U2AF1-201ENST00000291552 HNRNPUL2Q1KMD3 747 aaKnown RBP41.92■■■■■ 4.3
U2AF1-201ENST00000291552 UBTFP17480 764 aaKnown RBP41.86■■■■■ 4.29
U2AF1-201ENST00000291552 ARHGAP35Q9NRY4 1499 aa41.85■■■■■ 4.29
U2AF1-201ENST00000291552 CDK13Q14004 1512 aaKnown RBP41.83■■■■■ 4.29
U2AF1-201ENST00000291552 NEO1Q92859 1461 aa41.81■■■■■ 4.28
U2AF1-201ENST00000291552 PHLDB1Q86UU1 1377 aa41.78■■■■■ 4.28
U2AF1-201ENST00000291552 FRMPD1Q5SYB0 1578 aa41.76■■■■■ 4.28
U2AF1-201ENST00000291552 TTC37Q6PGP7 1564 aa41.76■■■■■ 4.27
U2AF1-201ENST00000291552 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP41.75■■■■■ 4.279e-12■■■■■ 76.3
U2AF1-201ENST00000291552 PLEKHD1A6NEE1 506 aa41.74■■■■■ 4.27
U2AF1-201ENST00000291552 HECW1Q76N89 1606 aa41.72■■■■■ 4.27
U2AF1-201ENST00000291552 FMN1Q68DA7 1419 aa41.69■■■■■ 4.27
U2AF1-201ENST00000291552 RAPGEF3O95398 923 aa41.64■■■■■ 4.26
U2AF1-201ENST00000291552 LRRIQ1Q96JM4 1722 aa41.62■■■■■ 4.25
U2AF1-201ENST00000291552 RICTORQ6R327 1708 aa41.61■■■■■ 4.25
U2AF1-201ENST00000291552 CFAP74Q9C0B2 1584 aa41.6■■■■■ 4.25
U2AF1-201ENST00000291552 FANCAO15360 1455 aa41.58■■■■■ 4.25
U2AF1-201ENST00000291552 AKNAQ7Z591 1439 aa41.54■■■■■ 4.24
U2AF1-201ENST00000291552 DENND4BO75064 1496 aaPredicted RBP41.49■■■■■ 4.23
U2AF1-201ENST00000291552 KIF14Q15058 1648 aa41.48■■■■■ 4.23
U2AF1-201ENST00000291552 ATP1B4Q9UN42 357 aaPredicted RBP41.48■■■■■ 4.23
U2AF1-201ENST00000291552 ARHGEF40Q8TER5 1519 aa41.48■■■■■ 4.23
U2AF1-201ENST00000291552 ADAMTSL3P82987 1691 aa41.45■■■■■ 4.23
U2AF1-201ENST00000291552 PCF11O94913 1555 aaKnown RBP41.45■■■■■ 4.23
U2AF1-201ENST00000291552 MYO5CQ9NQX4 1742 aa41.44■■■■■ 4.22
U2AF1-201ENST00000291552 PLCH2O75038 1416 aa41.42■■■■■ 4.22
U2AF1-201ENST00000291552 ZMYM4Q5VZL5 1548 aa41.41■■■■■ 4.22
U2AF1-201ENST00000291552 HECW2Q9P2P5 1572 aa41.41■■■■■ 4.22
U2AF1-201ENST00000291552 BCORL1Q5H9F3 1711 aa41.39■■■■■ 4.22
U2AF1-201ENST00000291552 TROQ12816 1431 aaPredicted RBP41.37■■■■■ 4.21
U2AF1-201ENST00000291552 CASKIN1Q8WXD9 1431 aa41.33■■■■■ 4.21
U2AF1-201ENST00000291552 CDK11AQ9UQ88 783 aaPredicted RBP41.31■■■■■ 4.2
U2AF1-201ENST00000291552 SIGLEC1Q9BZZ2 1709 aa41.3■■■■■ 4.2
U2AF1-201ENST00000291552 MADDQ8WXG6 1647 aa41.29■■■■■ 4.2
U2AF1-201ENST00000291552 POGZQ7Z3K3 1410 aa41.28■■■■■ 4.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms