RNA–Protein interactions for RNA: ENST00000285814.8

NIFK-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIFK, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFK-201ENST00000285814 RANGAP1P46060 587 aaPredicted RBP29.15■■■□□ 2.26
NIFK-201ENST00000285814 CHD1O14646 1710 aa29.15■■■□□ 2.26
NIFK-201ENST00000285814 CEP170Q5SW79 1584 aa29.15■■■□□ 2.26
NIFK-201ENST00000285814 ARHGAP35Q9NRY4 1499 aa29.14■■■□□ 2.26
NIFK-201ENST00000285814 IQGAP2Q13576 1575 aa29.14■■■□□ 2.26
NIFK-201ENST00000285814 NUP160Q12769 1436 aa29.14■■■□□ 2.26
NIFK-201ENST00000285814 FBLN2P98095 1184 aa29.13■■■□□ 2.25
NIFK-201ENST00000285814 KIAA0586Q9BVV6 1533 aa29.12■■■□□ 2.25
NIFK-201ENST00000285814 EFCAB5A4FU69 1503 aa29.09■■■□□ 2.25
NIFK-201ENST00000285814 ARAP1Q96P48 1450 aa29.09■■■□□ 2.25
NIFK-201ENST00000285814 SAMD9Q5K651 1589 aa29.04■■■□□ 2.24
NIFK-201ENST00000285814 VPS8Q8N3P4 1428 aa29.02■■■□□ 2.24
NIFK-201ENST00000285814 UGGT2Q9NYU1 1516 aa29.01■■■□□ 2.24
NIFK-201ENST00000285814 FHOD3Q2V2M9 1422 aa28.91■■■□□ 2.22
NIFK-201ENST00000285814 DISP1Q96F81 1524 aa28.87■■■□□ 2.21
NIFK-201ENST00000285814 P3H3Q8IVL6 736 aa28.86■■■□□ 2.21
NIFK-201ENST00000285814 KIAA0556O60303 1618 aa28.86■■■□□ 2.21
NIFK-201ENST00000285814 CLASP1Q7Z460 1538 aa28.83■■■□□ 2.21
NIFK-201ENST00000285814 JPH4Q96JJ6 628 aa28.82■■■□□ 2.2
NIFK-201ENST00000285814 SHROOM2Q13796 1616 aa28.81■■■□□ 2.2
NIFK-201ENST00000285814 FMN1Q68DA7 1419 aa28.79■■■□□ 2.2
NIFK-201ENST00000285814 PCF11O94913 1555 aaKnown RBP28.75■■■□□ 2.19
NIFK-201ENST00000285814 CARMIL2Q6F5E8 1435 aa28.74■■■□□ 2.19
NIFK-201ENST00000285814 FYCO1Q9BQS8 1478 aa28.71■■■□□ 2.19
NIFK-201ENST00000285814 CASKIN1Q8WXD9 1431 aa28.7■■■□□ 2.19
NIFK-201ENST00000285814 PRG4Q92954 1404 aaPredicted RBP28.69■■■□□ 2.18
NIFK-201ENST00000285814 APLP2Q06481 763 aa28.62■■■□□ 2.17
NIFK-201ENST00000285814 MAP3K1Q13233 1512 aa28.62■■■□□ 2.17
NIFK-201ENST00000285814 OSCARQ8IYS5 282 aa28.61■■■□□ 2.17
NIFK-201ENST00000285814 TIAM1Q13009 1591 aa28.58■■■□□ 2.17
NIFK-201ENST00000285814 CFAP43Q8NDM7 1665 aa28.58■■■□□ 2.17
NIFK-201ENST00000285814 ERCC6L2Q5T890 1561 aa28.56■■■□□ 2.16
NIFK-201ENST00000285814 HECW1Q76N89 1606 aa28.56■■■□□ 2.16
NIFK-201ENST00000285814 PPARGC1BQ86YN6 1023 aaKnown RBP28.55■■■□□ 2.16
NIFK-201ENST00000285814 LRRIQ1Q96JM4 1722 aa28.54■■■□□ 2.16
NIFK-201ENST00000285814 RAPGEF6Q8TEU7 1601 aa28.53■■■□□ 2.16
NIFK-201ENST00000285814 ATP1B4Q9UN42 357 aaPredicted RBP28.49■■■□□ 2.15
NIFK-201ENST00000285814 PTPRGP23470 1445 aa28.47■■■□□ 2.15
NIFK-201ENST00000285814 TTBK1Q5TCY1 1321 aaPredicted RBP28.46■■■□□ 2.15
NIFK-201ENST00000285814 CCDC18Q5T9S5 1454 aa28.46■■■□□ 2.15
NIFK-201ENST00000285814 PLB1Q6P1J6 1458 aa28.46■■■□□ 2.15
NIFK-201ENST00000285814 ABCA8O94911 1581 aa28.46■■■□□ 2.15
NIFK-201ENST00000285814 KANK4Q5T7N3 995 aaPredicted RBP28.44■■■□□ 2.14
NIFK-201ENST00000285814 NUP153P49790 1475 aaKnown RBP28.44■■■□□ 2.14
NIFK-201ENST00000285814 EPRSP07814 1512 aaKnown RBP28.43■■■□□ 2.14
NIFK-201ENST00000285814 LRRC9Q6ZRR7 1453 aa28.43■■■□□ 2.14
NIFK-201ENST00000285814 TRIM26Q12899 539 aaPredicted RBP28.38■■■□□ 2.13
NIFK-201ENST00000285814 CDK13Q14004 1512 aaKnown RBP28.36■■■□□ 2.13
NIFK-201ENST00000285814 UACAQ9BZF9 1416 aa28.32■■■□□ 2.12
NIFK-201ENST00000285814 EHBP1L1Q8N3D4 1523 aa28.29■■■□□ 2.12
NIFK-201ENST00000285814 ABCC2Q92887 1545 aa28.28■■■□□ 2.12
NIFK-201ENST00000285814 MAGI3Q5TCQ9 1506 aa28.28■■■□□ 2.12
NIFK-201ENST00000285814 MTUS2Q5JR59 1369 aa28.26■■■□□ 2.12
NIFK-201ENST00000285814 UHRF1BP1LA0JNW5 1464 aa28.25■■■□□ 2.11
NIFK-201ENST00000285814 ARID3CA6NKF2 412 aa28.23■■■□□ 2.11
NIFK-201ENST00000285814 ATP10BO94823 1461 aa28.23■■■□□ 2.11
NIFK-201ENST00000285814 PCGF6Q9BYE7 350 aa28.22■■■□□ 2.11
NIFK-201ENST00000285814 ARHGEF11O15085 1522 aa28.2■■■□□ 2.1
NIFK-201ENST00000285814 SUPT6HQ7KZ85 1726 aaKnown RBP28.19■■■□□ 2.1
NIFK-201ENST00000285814 CDK11AQ9UQ88 783 aaPredicted RBP28.16■■■□□ 2.1
NIFK-201ENST00000285814 ADCY10Q96PN6 1610 aa28.14■■■□□ 2.1
NIFK-201ENST00000285814 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.14■■■□□ 2.1
NIFK-201ENST00000285814 HNRNPUL2Q1KMD3 747 aaKnown RBP28.14■■■□□ 2.1
NIFK-201ENST00000285814 TROQ12816 1431 aaPredicted RBP28.13■■■□□ 2.09
NIFK-201ENST00000285814 NCOA2Q15596 1464 aa28.12■■■□□ 2.09
NIFK-201ENST00000285814 PHLDB1Q86UU1 1377 aa28.12■■■□□ 2.09
NIFK-201ENST00000285814 KDM5BQ9UGL1 1544 aa28.12■■■□□ 2.09
NIFK-201ENST00000285814 RRBP1Q9P2E9 1410 aaKnown RBP28.11■■■□□ 2.09
NIFK-201ENST00000285814 RIMBP3CA6NJZ7 1639 aa28.09■■■□□ 2.09
NIFK-201ENST00000285814 RIMBP3BA6NNM3 1639 aa28.09■■■□□ 2.09
NIFK-201ENST00000285814 ZCCHC11Q5TAX3 1644 aaKnown RBP28.09■■■□□ 2.09
NIFK-201ENST00000285814 RIMBP3Q9UFD9 1639 aa28.09■■■□□ 2.09
NIFK-201ENST00000285814 PLEKHD1A6NEE1 506 aa28.03■■■□□ 2.08
NIFK-201ENST00000285814 CCNB3Q8WWL7 1395 aa28.01■■■□□ 2.07
NIFK-201ENST00000285814 KIF14Q15058 1648 aa28.01■■■□□ 2.07
NIFK-201ENST00000285814 MYOM3Q5VTT5 1437 aa28■■■□□ 2.07
NIFK-201ENST00000285814 FGD6Q6ZV73 1430 aa27.97■■■□□ 2.07
NIFK-201ENST00000285814 ABCC10Q5T3U5 1492 aa27.91■■■□□ 2.06
NIFK-201ENST00000285814 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.89■■■□□ 2.06
NIFK-201ENST00000285814 ITSN2Q9NZM3 1697 aa27.89■■■□□ 2.06
NIFK-201ENST00000285814 MIA2Q96PC5 1412 aa27.89■■■□□ 2.05
NIFK-201ENST00000285814 PTPN23Q9H3S7 1636 aa27.87■■■□□ 2.05
NIFK-201ENST00000285814 WDR7Q9Y4E6 1490 aa27.85■■■□□ 2.05
NIFK-201ENST00000285814 GPATCH8Q9UKJ3 1502 aaKnown RBP27.85■■■□□ 2.05
NIFK-201ENST00000285814 TCOF1Q13428 1488 aaKnown RBP27.84■■■□□ 2.05
NIFK-201ENST00000285814 CDC42BPAQ5VT25 1732 aa27.84■■■□□ 2.05
NIFK-201ENST00000285814 CYB5RLQ6IPT4 315 aa27.84■■■□□ 2.05
NIFK-201ENST00000285814 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.82■■■□□ 2.04
NIFK-201ENST00000285814 NPM1P06748 294 aaKnown RBP eCLIP27.81■■■□□ 2.04
NIFK-201ENST00000285814 ASXL2Q76L83 1435 aa27.81■■■□□ 2.04
NIFK-201ENST00000285814 TTC37Q6PGP7 1564 aa27.81■■■□□ 2.04
NIFK-201ENST00000285814 FAM50AQ14320 339 aaKnown RBP27.79■■■□□ 2.04
NIFK-201ENST00000285814 PREX2Q70Z35 1606 aa27.77■■■□□ 2.04
NIFK-201ENST00000285814 MYO5CQ9NQX4 1742 aa27.73■■■□□ 2.03
NIFK-201ENST00000285814 MAPKBP1O60336 1514 aa27.73■■■□□ 2.03
NIFK-201ENST00000285814 KCNH8Q96L42 1107 aa27.72■■■□□ 2.03
NIFK-201ENST00000285814 CDC42BPBQ9Y5S2 1711 aa27.72■■■□□ 2.03
NIFK-201ENST00000285814 CFDP1Q9UEE9 299 aaPredicted RBP27.72■■■□□ 2.03
NIFK-201ENST00000285814 ABCA9Q8IUA7 1624 aa27.69■■■□□ 2.02
NIFK-201ENST00000285814 CAMSAP2Q08AD1 1489 aa27.69■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms