RNA–Protein interactions for RNA: ENST00000285814.8

NIFK-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIFK, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFK-201ENST00000285814 NISCHQ9Y2I1 1504 aa42.47■■■■■ 4.39
NIFK-201ENST00000285814 CCDC180Q9P1Z9 1646 aa37.27■■■■□ 3.56
NIFK-201ENST00000285814 ZCCHC6Q5VYS8 1495 aaKnown RBP35.63■■■■□ 3.29
NIFK-201ENST00000285814 ABCC9O60706 1549 aa35.39■■■■□ 3.26
NIFK-201ENST00000285814 DCAF1Q9Y4B6 1507 aa35.18■■■■□ 3.22
NIFK-201ENST00000285814 DCAF8L2P0C7V8 631 aa34.98■■■■□ 3.19
NIFK-201ENST00000285814 MYO15BQ96JP2 1530 aa34.91■■■■□ 3.18
NIFK-201ENST00000285814 NACADO15069 1562 aa34.75■■■■□ 3.15
NIFK-201ENST00000285814 RB1CC1Q8TDY2 1594 aa34.51■■■■□ 3.12
NIFK-201ENST00000285814 SHROOM4Q9ULL8 1493 aa34.25■■■■□ 3.07
NIFK-201ENST00000285814 SCRIBQ14160 1630 aa34.12■■■■□ 3.05
NIFK-201ENST00000285814 UNC13AQ9UPW8 1703 aa33.83■■■■□ 3.01
NIFK-201ENST00000285814 BICRAQ9NZM4 1560 aa33.48■■■□□ 2.95
NIFK-201ENST00000285814 PABPN1Q86U42 306 aaKnown RBP eCLIP33.25■■■□□ 2.91
NIFK-201ENST00000285814 CECR2Q9BXF3 1484 aa32.97■■■□□ 2.87
NIFK-201ENST00000285814 BAZ1AQ9NRL2 1556 aaPredicted RBP32.83■■■□□ 2.85
NIFK-201ENST00000285814 RSF1Q96T23 1441 aaPredicted RBP32.78■■■□□ 2.84
NIFK-201ENST00000285814 MROH2BQ7Z745 1585 aa32.77■■■□□ 2.84
NIFK-201ENST00000285814 SUPT5HO00267 1087 aaKnown RBP32.77■■■□□ 2.84
NIFK-201ENST00000285814 SMARCA4P51532 1647 aa32.73■■■□□ 2.83
NIFK-201ENST00000285814 EIF4G1Q04637 1599 aaKnown RBP32.49■■■□□ 2.79
NIFK-201ENST00000285814 WIZO95785 1651 aa32.49■■■□□ 2.79
NIFK-201ENST00000285814 PEG3Q9GZU2 1588 aa32.39■■■□□ 2.78
NIFK-201ENST00000285814 SMARCA2P51531 1590 aa32.26■■■□□ 2.75
NIFK-201ENST00000285814 ATAD2BQ9ULI0 1458 aa32.25■■■□□ 2.75
NIFK-201ENST00000285814 TOP2AP11388 1531 aaKnown RBP32.18■■■□□ 2.74
NIFK-201ENST00000285814 CC2D2AQ9P2K1 1620 aa32.08■■■□□ 2.73
NIFK-201ENST00000285814 NCAPD3P42695 1498 aa32.05■■■□□ 2.72
NIFK-201ENST00000285814 BAZ1BQ9UIG0 1483 aaKnown RBP32.04■■■□□ 2.72
NIFK-201ENST00000285814 HMGXB3Q12766 1538 aa32.02■■■□□ 2.72
NIFK-201ENST00000285814 CCDC88BA6NC98 1476 aa31.8■■■□□ 2.68
NIFK-201ENST00000285814 DNAJC5BQ9UF47 199 aa31.47■■■□□ 2.63
NIFK-201ENST00000285814 CHIC1Q5VXU3 224 aa31.25■■■□□ 2.59
NIFK-201ENST00000285814 CFTRP13569 1480 aa31.24■■■□□ 2.59
NIFK-201ENST00000285814 CADPSQ9ULU8 1353 aa31.17■■■□□ 2.58
NIFK-201ENST00000285814 PRDM2Q13029 1718 aa31.13■■■□□ 2.57
NIFK-201ENST00000285814 LAMC3Q9Y6N6 1575 aa31.04■■■□□ 2.56
NIFK-201ENST00000285814 ABCC8Q09428 1581 aa31.01■■■□□ 2.55
NIFK-201ENST00000285814 NESP48681 1621 aa30.97■■■□□ 2.55
NIFK-201ENST00000285814 TRIM41Q8WV44 630 aa30.87■■■□□ 2.53
NIFK-201ENST00000285814 WRNQ14191 1432 aaPredicted RBP eCLIP30.86■■■□□ 2.53
NIFK-201ENST00000285814 FANCD2Q9BXW9 1451 aa30.83■■■□□ 2.53
NIFK-201ENST00000285814 SYNJ1O43426 1573 aa30.77■■■□□ 2.52
NIFK-201ENST00000285814 PDS5BQ9NTI5 1447 aa30.76■■■□□ 2.51
NIFK-201ENST00000285814 TOP2BQ02880 1626 aa30.7■■■□□ 2.51
NIFK-201ENST00000285814 BIVM-ERCC5R4GMW8 1640 aa30.7■■■□□ 2.5
NIFK-201ENST00000285814 CEP164Q9UPV0 1460 aa30.68■■■□□ 2.5
NIFK-201ENST00000285814 CUX1P39880 1505 aa30.68■■■□□ 2.5
NIFK-201ENST00000285814 KIF21AQ7Z4S6 1674 aa30.66■■■□□ 2.5
NIFK-201ENST00000285814 DNMBPQ6XZF7 1577 aa30.53■■■□□ 2.48
NIFK-201ENST00000285814 URB2Q14146 1524 aaKnown RBP30.47■■■□□ 2.47
NIFK-201ENST00000285814 TOPBP1Q92547 1522 aa30.47■■■□□ 2.47
NIFK-201ENST00000285814 MRC2Q9UBG0 1479 aa30.4■■■□□ 2.46
NIFK-201ENST00000285814 ERCC6Q03468 1493 aa30.39■■■□□ 2.45
NIFK-201ENST00000285814 FGD5Q6ZNL6 1462 aa30.38■■■□□ 2.45
NIFK-201ENST00000285814 SOGA1O94964 1423 aa30.34■■■□□ 2.45
NIFK-201ENST00000285814 POLA1P09884 1462 aaPredicted RBP30.29■■■□□ 2.44
NIFK-201ENST00000285814 EEA1Q15075 1411 aa30.28■■■□□ 2.44
NIFK-201ENST00000285814 WDR62O43379 1518 aa30.28■■■□□ 2.44
NIFK-201ENST00000285814 THOC2Q8NI27 1593 aaKnown RBP30.28■■■□□ 2.44
NIFK-201ENST00000285814 RUSC2Q8N2Y8 1516 aa30.24■■■□□ 2.43
NIFK-201ENST00000285814 FAM9AQ8IZU1 332 aaPredicted RBP30.23■■■□□ 2.43
NIFK-201ENST00000285814 RAD54L2Q9Y4B4 1467 aa30.14■■■□□ 2.42
NIFK-201ENST00000285814 ABCA10Q8WWZ4 1543 aa30.14■■■□□ 2.42
NIFK-201ENST00000285814 KIF27Q86VH2 1401 aa30.12■■■□□ 2.41
NIFK-201ENST00000285814 WDR97A6NE52 1622 aa30.12■■■□□ 2.41
NIFK-201ENST00000285814 CUX2O14529 1486 aa30.1■■■□□ 2.41
NIFK-201ENST00000285814 TARBP1Q13395 1621 aaKnown RBP30.08■■■□□ 2.41
NIFK-201ENST00000285814 CSRNP3Q8WYN3 585 aa30.06■■■□□ 2.4
NIFK-201ENST00000285814 LOC105371045A0A1W2PR82 267 aa29.98■■■□□ 2.39
NIFK-201ENST00000285814 IFT140Q96RY7 1462 aa29.98■■■□□ 2.39
NIFK-201ENST00000285814 ABCA5Q8WWZ7 1642 aa29.94■■■□□ 2.38
NIFK-201ENST00000285814 KIF21BO75037 1637 aa29.92■■■□□ 2.38
NIFK-201ENST00000285814 IGF1RP08069 1367 aa29.86■■■□□ 2.37
NIFK-201ENST00000285814 TDRD9Q8NDG6 1382 aaKnown RBP29.86■■■□□ 2.37
NIFK-201ENST00000285814 PRXQ9BXM0 1461 aa29.86■■■□□ 2.37
NIFK-201ENST00000285814 GAPVD1Q14C86 1478 aa29.84■■■□□ 2.37
NIFK-201ENST00000285814 GOLGA3Q08378 1498 aa29.82■■■□□ 2.36
NIFK-201ENST00000285814 ERICH3Q5RHP9 1530 aa29.79■■■□□ 2.36
NIFK-201ENST00000285814 ZNF608Q9ULD9 1512 aaPredicted RBP29.79■■■□□ 2.36
NIFK-201ENST00000285814 EHMT2Q96KQ7 1210 aa29.76■■■□□ 2.36
NIFK-201ENST00000285814 RAPGEF2Q9Y4G8 1499 aa29.75■■■□□ 2.35
NIFK-201ENST00000285814 CUL7Q14999 1698 aa29.75■■■□□ 2.35
NIFK-201ENST00000285814 AQRO60306 1485 aaKnown RBP eCLIP29.75■■■□□ 2.357e-7■■■■■ 31
NIFK-201ENST00000285814 PBRM1Q86U86 1689 aa29.75■■■□□ 2.35
NIFK-201ENST00000285814 EIF4G3O43432 1585 aaKnown RBP29.73■■■□□ 2.35
NIFK-201ENST00000285814 CARMIL1Q5VZK9 1371 aa29.7■■■□□ 2.35
NIFK-201ENST00000285814 GRIN2BQ13224 1484 aa29.67■■■□□ 2.34
NIFK-201ENST00000285814 TNIKQ9UKE5 1360 aa29.65■■■□□ 2.34
NIFK-201ENST00000285814 UBTFP17480 764 aaKnown RBP29.6■■■□□ 2.33
NIFK-201ENST00000285814 ADAMTS12P58397 1594 aa29.57■■■□□ 2.32
NIFK-201ENST00000285814 FHAD1B1AJZ9 1412 aa29.53■■■□□ 2.32
NIFK-201ENST00000285814 SNAPC4Q5SXM2 1469 aa29.5■■■□□ 2.31
NIFK-201ENST00000285814 MAGI1Q96QZ7 1491 aaPredicted RBP29.49■■■□□ 2.31
NIFK-201ENST00000285814 CEP162Q5TB80 1403 aa29.46■■■□□ 2.31
NIFK-201ENST00000285814 CTTNBP2Q8WZ74 1663 aa29.36■■■□□ 2.29
NIFK-201ENST00000285814 SYNJ2O15056 1496 aa29.36■■■□□ 2.29
NIFK-201ENST00000285814 GRIN2AQ12879 1464 aa29.31■■■□□ 2.28
NIFK-201ENST00000285814 CLIP1P30622 1438 aa29.3■■■□□ 2.28
NIFK-201ENST00000285814 CHMP7Q8WUX9 453 aaPredicted RBP29.22■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms