RNA–Protein interactions for RNA: ENST00000276014.11

CCNB3-201, Transcript of cyclin B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNB3, Length 4,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3-201ENST00000276014 JPH4Q96JJ6 628 aa7.72□□□□□ -1.17
CCNB3-201ENST00000276014 KIF21AQ7Z4S6 1674 aa7.7□□□□□ -1.18
CCNB3-201ENST00000276014 TRIM52Q96A61 297 aa7.7□□□□□ -1.18
CCNB3-201ENST00000276014 TSPY4P0CV99 314 aa7.69□□□□□ -1.18
CCNB3-201ENST00000276014 TSPY10P0CW01 314 aa7.69□□□□□ -1.18
CCNB3-201ENST00000276014 WDR97A6NE52 1622 aa7.68□□□□□ -1.18
CCNB3-201ENST00000276014 DIEXFQ68CQ4 756 aaKnown RBP7.68□□□□□ -1.18
CCNB3-201ENST00000276014 NESP48681 1621 aa7.68□□□□□ -1.18
CCNB3-201ENST00000276014 TOP2BQ02880 1626 aa7.68□□□□□ -1.18
CCNB3-201ENST00000276014 FANCD2Q9BXW9 1451 aa7.68□□□□□ -1.18
CCNB3-201ENST00000276014 NEUROD1Q13562 356 aa7.68□□□□□ -1.18
CCNB3-201ENST00000276014 THOC2Q8NI27 1593 aaKnown RBP7.67□□□□□ -1.18
CCNB3-201ENST00000276014 CARMIL2Q6F5E8 1435 aa7.67□□□□□ -1.18
CCNB3-201ENST00000276014 LMOD2Q6P5Q4 547 aa7.66□□□□□ -1.18
CCNB3-201ENST00000276014 SYNJ1O43426 1573 aa7.66□□□□□ -1.18
CCNB3-201ENST00000276014 GGT6Q6P531 493 aa7.66□□□□□ -1.18
CCNB3-201ENST00000276014 MEX3CQ5U5Q3 659 aaKnown RBP7.65□□□□□ -1.18
CCNB3-201ENST00000276014 POLR3GLQ9BT43 218 aa7.65□□□□□ -1.18
CCNB3-201ENST00000276014 DCAF8L1A6NGE4 600 aa7.65□□□□□ -1.19
CCNB3-201ENST00000276014 CSRNP3Q8WYN3 585 aa7.65□□□□□ -1.19
CCNB3-201ENST00000276014 YTHDC1Q96MU7 727 aaKnown RBP7.64□□□□□ -1.19
CCNB3-201ENST00000276014 WDR62O43379 1518 aa7.63□□□□□ -1.19
CCNB3-201ENST00000276014 CUX1P39880 1505 aa7.63□□□□□ -1.19
CCNB3-201ENST00000276014 WRNQ14191 1432 aaPredicted RBP eCLIP7.63□□□□□ -1.19
CCNB3-201ENST00000276014 PIP4K2BP78356 416 aa7.62□□□□□ -1.19
CCNB3-201ENST00000276014 DNMBPQ6XZF7 1577 aa7.62□□□□□ -1.19
CCNB3-201ENST00000276014 ZBTB7CA1YPR0 619 aa7.62□□□□□ -1.19
CCNB3-201ENST00000276014 ZNF326Q5BKZ1 582 aaKnown RBP7.62□□□□□ -1.19
CCNB3-201ENST00000276014 CCDC9Q9Y3X0 531 aaKnown RBP7.61□□□□□ -1.19
CCNB3-201ENST00000276014 ABCC8Q09428 1581 aa7.61□□□□□ -1.19
CCNB3-201ENST00000276014 SLC24A1O60721 1099 aa7.61□□□□□ -1.19
CCNB3-201ENST00000276014 MRC2Q9UBG0 1479 aa7.61□□□□□ -1.19
CCNB3-201ENST00000276014 CUX2O14529 1486 aa7.6□□□□□ -1.19
CCNB3-201ENST00000276014 AQRO60306 1485 aaKnown RBP eCLIP7.59□□□□□ -1.19
CCNB3-201ENST00000276014 PTPRGP23470 1445 aa7.59□□□□□ -1.19
CCNB3-201ENST00000276014 FOXD1Q16676 465 aa7.59□□□□□ -1.2
CCNB3-201ENST00000276014 TARBP1Q13395 1621 aaKnown RBP7.58□□□□□ -1.2
CCNB3-201ENST00000276014 URB2Q14146 1524 aaKnown RBP7.58□□□□□ -1.2
CCNB3-201ENST00000276014 EFCAB2Q5VUJ9 269 aa7.56□□□□□ -1.2
CCNB3-201ENST00000276014 CFDP1Q9UEE9 299 aaPredicted RBP7.56□□□□□ -1.2
CCNB3-201ENST00000276014 KIF27Q86VH2 1401 aa7.56□□□□□ -1.2
CCNB3-201ENST00000276014 TOPBP1Q92547 1522 aa7.55□□□□□ -1.2
CCNB3-201ENST00000276014 ABCA5Q8WWZ7 1642 aa7.55□□□□□ -1.2
CCNB3-201ENST00000276014 HDGFP51858 240 aaKnown RBP7.55□□□□□ -1.2
CCNB3-201ENST00000276014 EID1Q9Y6B2 187 aa7.54□□□□□ -1.2
CCNB3-201ENST00000276014 CNGB1Q14028 1251 aaPredicted RBP7.53□□□□□ -1.2
CCNB3-201ENST00000276014 CHIC2Q9UKJ5 165 aa7.53□□□□□ -1.2
CCNB3-201ENST00000276014 ZNF316A6NFI3 1004 aaPredicted RBP7.52□□□□□ -1.21
CCNB3-201ENST00000276014 DMRT2Q9Y5R5 561 aa7.52□□□□□ -1.21
CCNB3-201ENST00000276014 MTUS2Q5JR59 1369 aa7.52□□□□□ -1.21
CCNB3-201ENST00000276014 CARMIL1Q5VZK9 1371 aa7.52□□□□□ -1.21
CCNB3-201ENST00000276014 UBAP1LF5GYI3 381 aa7.51□□□□□ -1.21
CCNB3-201ENST00000276014 ABCA10Q8WWZ4 1543 aa7.51□□□□□ -1.21
CCNB3-201ENST00000276014 POLA1P09884 1462 aaPredicted RBP7.5□□□□□ -1.21
CCNB3-201ENST00000276014 PBRM1Q86U86 1689 aa7.49□□□□□ -1.21
CCNB3-201ENST00000276014 SF3B2Q13435 895 aaKnown RBP7.49□□□□□ -1.21
CCNB3-201ENST00000276014 FGD5Q6ZNL6 1462 aa7.48□□□□□ -1.21
CCNB3-201ENST00000276014 IFT140Q96RY7 1462 aa7.48□□□□□ -1.21
CCNB3-201ENST00000276014 KIF21BO75037 1637 aa7.48□□□□□ -1.21
CCNB3-201ENST00000276014 NPM2Q86SE8 214 aaKnown RBP7.47□□□□□ -1.21
CCNB3-201ENST00000276014 PRG4Q92954 1404 aaPredicted RBP7.46□□□□□ -1.21
CCNB3-201ENST00000276014 RAD54L2Q9Y4B4 1467 aa7.46□□□□□ -1.22
CCNB3-201ENST00000276014 HSPA2P54652 639 aa7.46□□□□□ -1.22
CCNB3-201ENST00000276014 CUL7Q14999 1698 aa7.45□□□□□ -1.22
CCNB3-201ENST00000276014 WASHC2CQ9Y4E1 1318 aa7.45□□□□□ -1.22
CCNB3-201ENST00000276014 KIF3BO15066 747 aa7.45□□□□□ -1.22
CCNB3-201ENST00000276014 GAPVD1Q14C86 1478 aa7.45□□□□□ -1.22
CCNB3-201ENST00000276014 EEA1Q15075 1411 aa7.44□□□□□ -1.22
CCNB3-201ENST00000276014 DISP3Q9P2K9 1392 aa7.44□□□□□ -1.22
CCNB3-201ENST00000276014 EIF4G3O43432 1585 aaKnown RBP7.44□□□□□ -1.22
CCNB3-201ENST00000276014 ERICH3Q5RHP9 1530 aa7.44□□□□□ -1.22
CCNB3-201ENST00000276014 NUTM2BA6NNL0 878 aaPredicted RBP7.44□□□□□ -1.22
CCNB3-201ENST00000276014 NUTM2EB1AL46 878 aaPredicted RBP7.44□□□□□ -1.22
CCNB3-201ENST00000276014 NUTM2AQ8IVF1 878 aaPredicted RBP7.44□□□□□ -1.22
CCNB3-201ENST00000276014 KLHL34Q8N239 644 aa7.44□□□□□ -1.22
CCNB3-201ENST00000276014 RAPGEF3O95398 923 aa7.43□□□□□ -1.22
CCNB3-201ENST00000276014 CLSPNQ9HAW4 1339 aa7.43□□□□□ -1.22
CCNB3-201ENST00000276014 POGZQ7Z3K3 1410 aa7.42□□□□□ -1.22
CCNB3-201ENST00000276014 GRIN2BQ13224 1484 aa7.42□□□□□ -1.22
CCNB3-201ENST00000276014 SPAG9O60271 1321 aaKnown RBP7.42□□□□□ -1.22
CCNB3-201ENST00000276014 TOM1O60784 492 aa7.42□□□□□ -1.22
CCNB3-201ENST00000276014 NUTM2DQ5VT03 806 aaPredicted RBP7.41□□□□□ -1.22
CCNB3-201ENST00000276014 ADAMTS12P58397 1594 aa7.41□□□□□ -1.22
CCNB3-201ENST00000276014 PRXQ9BXM0 1461 aa7.41□□□□□ -1.22
CCNB3-201ENST00000276014 CLIP1P30622 1438 aa7.4□□□□□ -1.23
CCNB3-201ENST00000276014 RUSC2Q8N2Y8 1516 aa7.39□□□□□ -1.23
CCNB3-201ENST00000276014 ATF3P18847 181 aa7.39□□□□□ -1.23
CCNB3-201ENST00000276014 MIER1Q8N108 512 aa7.39□□□□□ -1.23
CCNB3-201ENST00000276014 POGKQ9P215 609 aa7.39□□□□□ -1.23
CCNB3-201ENST00000276014 SNAPC4Q5SXM2 1469 aa7.39□□□□□ -1.23
CCNB3-201ENST00000276014 KANK1Q14678 1352 aa7.38□□□□□ -1.23
CCNB3-201ENST00000276014 NPHP1O15259 732 aa7.38□□□□□ -1.23
CCNB3-201ENST00000276014 CTTNBP2Q8WZ74 1663 aa7.38□□□□□ -1.23
CCNB3-201ENST00000276014 PROSER2Q86WR7 435 aaPredicted RBP7.38□□□□□ -1.23
CCNB3-201ENST00000276014 CCNB3Q8WWL7 1395 aa7.38□□□□□ -1.23
CCNB3-201ENST00000276014 PAK3O75914 559 aaPredicted RBP7.37□□□□□ -1.23
CCNB3-201ENST00000276014 ARXQ96QS3 562 aa7.37□□□□□ -1.23
CCNB3-201ENST00000276014 RGL3Q3MIN7 710 aa7.37□□□□□ -1.23
CCNB3-201ENST00000276014 TNIKQ9UKE5 1360 aa7.36□□□□□ -1.23
CCNB3-201ENST00000276014 CEBPAP49715 358 aaPredicted RBP7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms