RNA–Protein interactions for RNA: ENST00000276014.11

CCNB3-201, Transcript of cyclin B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNB3, Length 4,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3-201ENST00000276014 NISCHQ9Y2I1 1504 aa10.58□□□□□ -0.72
CCNB3-201ENST00000276014 DCAF8L2P0C7V8 631 aa10.43□□□□□ -0.74
CCNB3-201ENST00000276014 CCDC180Q9P1Z9 1646 aa9.47□□□□□ -0.89
CCNB3-201ENST00000276014 ABCC9O60706 1549 aa9.37□□□□□ -0.91
CCNB3-201ENST00000276014 PABPN1Q86U42 306 aaKnown RBP eCLIP9.19□□□□□ -0.94
CCNB3-201ENST00000276014 SHROOM4Q9ULL8 1493 aa9□□□□□ -0.97
CCNB3-201ENST00000276014 FAM9AQ8IZU1 332 aaPredicted RBP8.93□□□□□ -0.98
CCNB3-201ENST00000276014 ZCCHC6Q5VYS8 1495 aaKnown RBP8.93□□□□□ -0.98
CCNB3-201ENST00000276014 DCAF1Q9Y4B6 1507 aa8.91□□□□□ -0.98
CCNB3-201ENST00000276014 MYO15BQ96JP2 1530 aa8.88□□□□□ -0.99
CCNB3-201ENST00000276014 SUPT5HO00267 1087 aaKnown RBP8.84□□□□□ -0.99
CCNB3-201ENST00000276014 TTBK1Q5TCY1 1321 aaPredicted RBP8.76□□□□□ -1.01
CCNB3-201ENST00000276014 FBLN2P98095 1184 aa8.76□□□□□ -1.01
CCNB3-201ENST00000276014 TRIM41Q8WV44 630 aa8.73□□□□□ -1.01
CCNB3-201ENST00000276014 NACADO15069 1562 aa8.71□□□□□ -1.01
CCNB3-201ENST00000276014 TRHP20396 242 aaPredicted RBP8.66□□□□□ -1.02
CCNB3-201ENST00000276014 EHMT2Q96KQ7 1210 aa8.65□□□□□ -1.02
CCNB3-201ENST00000276014 MYT1LQ9UL68 1186 aa8.64□□□□□ -1.03
CCNB3-201ENST00000276014 AEBP2Q6ZN18 517 aaPredicted RBP8.63□□□□□ -1.03
CCNB3-201ENST00000276014 UNC13AQ9UPW8 1703 aa8.62□□□□□ -1.03
CCNB3-201ENST00000276014 RB1CC1Q8TDY2 1594 aa8.61□□□□□ -1.03
CCNB3-201ENST00000276014 RANGAP1P46060 587 aaPredicted RBP8.59□□□□□ -1.03
CCNB3-201ENST00000276014 ATP1B4Q9UN42 357 aaPredicted RBP8.59□□□□□ -1.04
CCNB3-201ENST00000276014 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.55□□□□□ -1.04
CCNB3-201ENST00000276014 HNRNPUL2Q1KMD3 747 aaKnown RBP8.55□□□□□ -1.04
CCNB3-201ENST00000276014 ERCC6Q03468 1493 aa8.51□□□□□ -1.05
CCNB3-201ENST00000276014 NPM1P06748 294 aaKnown RBP eCLIP8.48□□□□□ -1.05
CCNB3-201ENST00000276014 BICRAQ9NZM4 1560 aa8.46□□□□□ -1.06
CCNB3-201ENST00000276014 PLPPR3Q6T4P5 718 aa8.46□□□□□ -1.06
CCNB3-201ENST00000276014 SCRIBQ14160 1630 aa8.42□□□□□ -1.06
CCNB3-201ENST00000276014 CHIC1Q5VXU3 224 aa8.42□□□□□ -1.06
CCNB3-201ENST00000276014 DNAJC5BQ9UF47 199 aa8.37□□□□□ -1.07
CCNB3-201ENST00000276014 HRCP23327 699 aa8.35□□□□□ -1.07
CCNB3-201ENST00000276014 APLP2Q06481 763 aa8.35□□□□□ -1.07
CCNB3-201ENST00000276014 CHMP7Q8WUX9 453 aaPredicted RBP8.31□□□□□ -1.08
CCNB3-201ENST00000276014 CECR2Q9BXF3 1484 aa8.3□□□□□ -1.08
CCNB3-201ENST00000276014 ESF1Q9H501 851 aaKnown RBP8.29□□□□□ -1.08
CCNB3-201ENST00000276014 PELP1Q8IZL8 1130 aaKnown RBP8.28□□□□□ -1.08
CCNB3-201ENST00000276014 PCGF6Q9BYE7 350 aa8.26□□□□□ -1.09
CCNB3-201ENST00000276014 UBTFP17480 764 aaKnown RBP8.24□□□□□ -1.09
CCNB3-201ENST00000276014 CYB5RLQ6IPT4 315 aa8.24□□□□□ -1.09
CCNB3-201ENST00000276014 PEG3Q9GZU2 1588 aa8.24□□□□□ -1.09
CCNB3-201ENST00000276014 OSCARQ8IYS5 282 aa8.2□□□□□ -1.1
CCNB3-201ENST00000276014 SMARCA4P51532 1647 aa8.2□□□□□ -1.1
CCNB3-201ENST00000276014 ARID3CA6NKF2 412 aa8.19□□□□□ -1.1
CCNB3-201ENST00000276014 ARID4BQ4LE39 1312 aaPredicted RBP8.19□□□□□ -1.1
CCNB3-201ENST00000276014 BAZ1AQ9NRL2 1556 aaPredicted RBP8.17□□□□□ -1.1
CCNB3-201ENST00000276014 BCANQ96GW7 911 aa8.15□□□□□ -1.1
CCNB3-201ENST00000276014 PPARGC1BQ86YN6 1023 aaKnown RBP8.13□□□□□ -1.11
CCNB3-201ENST00000276014 MROH2BQ7Z745 1585 aa8.12□□□□□ -1.11
CCNB3-201ENST00000276014 EIF4G1Q04637 1599 aaKnown RBP8.12□□□□□ -1.11
CCNB3-201ENST00000276014 SCAF1Q9H7N4 1312 aaKnown RBP8.11□□□□□ -1.11
CCNB3-201ENST00000276014 RSF1Q96T23 1441 aaPredicted RBP8.09□□□□□ -1.11
CCNB3-201ENST00000276014 WIZO95785 1651 aa8.07□□□□□ -1.12
CCNB3-201ENST00000276014 SMARCA2P51531 1590 aa8.07□□□□□ -1.12
CCNB3-201ENST00000276014 SENP3Q9H4L4 574 aaPredicted RBP8.07□□□□□ -1.12
CCNB3-201ENST00000276014 HMGXB3Q12766 1538 aa8.07□□□□□ -1.12
CCNB3-201ENST00000276014 KCNH8Q96L42 1107 aa8.06□□□□□ -1.12
CCNB3-201ENST00000276014 ZEB1P37275 1124 aaPredicted RBP8.05□□□□□ -1.12
CCNB3-201ENST00000276014 PDS5BQ9NTI5 1447 aa8.04□□□□□ -1.12
CCNB3-201ENST00000276014 MYT1Q01538 1121 aa8.04□□□□□ -1.12
CCNB3-201ENST00000276014 TOP2AP11388 1531 aaKnown RBP8.04□□□□□ -1.12
CCNB3-201ENST00000276014 P3H3Q8IVL6 736 aa8.02□□□□□ -1.12
CCNB3-201ENST00000276014 BAZ1BQ9UIG0 1483 aaKnown RBP8.02□□□□□ -1.13
CCNB3-201ENST00000276014 ATAD2BQ9ULI0 1458 aa8□□□□□ -1.13
CCNB3-201ENST00000276014 CC2D2AQ9P2K1 1620 aa8□□□□□ -1.13
CCNB3-201ENST00000276014 NCAPD3P42695 1498 aa8□□□□□ -1.13
CCNB3-201ENST00000276014 TRIM26Q12899 539 aaPredicted RBP7.99□□□□□ -1.13
CCNB3-201ENST00000276014 DNAJC5Q9H3Z4 198 aa7.99□□□□□ -1.13
CCNB3-201ENST00000276014 STAG3Q9UJ98 1225 aa7.99□□□□□ -1.13
CCNB3-201ENST00000276014 PRDM2Q13029 1718 aa7.97□□□□□ -1.13
CCNB3-201ENST00000276014 MLECQ14165 292 aa7.97□□□□□ -1.13
CCNB3-201ENST00000276014 ZNF777Q9ULD5 760 aaPredicted RBP7.97□□□□□ -1.13
CCNB3-201ENST00000276014 CDK11AQ9UQ88 783 aaPredicted RBP7.93□□□□□ -1.14
CCNB3-201ENST00000276014 C14orf37Q86TY3 774 aa7.92□□□□□ -1.14
CCNB3-201ENST00000276014 LOC105371045A0A1W2PR82 267 aa7.89□□□□□ -1.15
CCNB3-201ENST00000276014 FAM69CQ0P6D2 419 aa7.89□□□□□ -1.15
CCNB3-201ENST00000276014 ITGAEP38570 1179 aa7.88□□□□□ -1.15
CCNB3-201ENST00000276014 CENPBP07199 599 aaPredicted RBP7.87□□□□□ -1.15
CCNB3-201ENST00000276014 PHF23Q9BUL5 403 aaPredicted RBP7.86□□□□□ -1.15
CCNB3-201ENST00000276014 CHGAP10645 457 aaKnown RBP7.86□□□□□ -1.15
CCNB3-201ENST00000276014 CCDC88BA6NC98 1476 aa7.85□□□□□ -1.15
CCNB3-201ENST00000276014 SLC4A1APQ9BWU0 796 aaKnown RBP7.84□□□□□ -1.16
CCNB3-201ENST00000276014 TDRD9Q8NDG6 1382 aaKnown RBP7.83□□□□□ -1.16
CCNB3-201ENST00000276014 PLEKHG5O94827 1062 aa7.82□□□□□ -1.16
CCNB3-201ENST00000276014 PLEKHD1A6NEE1 506 aa7.81□□□□□ -1.16
CCNB3-201ENST00000276014 CADPSQ9ULU8 1353 aa7.81□□□□□ -1.16
CCNB3-201ENST00000276014 A0A0G2JS52 829 aa7.8□□□□□ -1.16
CCNB3-201ENST00000276014 HAP1P54257 671 aaPredicted RBP7.8□□□□□ -1.16
CCNB3-201ENST00000276014 CFTRP13569 1480 aa7.78□□□□□ -1.16
CCNB3-201ENST00000276014 LAMC3Q9Y6N6 1575 aa7.78□□□□□ -1.16
CCNB3-201ENST00000276014 CEP164Q9UPV0 1460 aa7.77□□□□□ -1.16
CCNB3-201ENST00000276014 PPP1R15AO75807 674 aaPredicted RBP7.77□□□□□ -1.17
CCNB3-201ENST00000276014 ACIN1Q9UKV3 1341 aaKnown RBP7.76□□□□□ -1.17
CCNB3-201ENST00000276014 CCER1Q8TC90 406 aaPredicted RBP7.76□□□□□ -1.17
CCNB3-201ENST00000276014 BIVM-ERCC5R4GMW8 1640 aa7.75□□□□□ -1.17
CCNB3-201ENST00000276014 FAM50AQ14320 339 aaKnown RBP7.73□□□□□ -1.17
CCNB3-201ENST00000276014 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.73□□□□□ -1.17
CCNB3-201ENST00000276014 GTF3C3Q9Y5Q9 886 aa7.73□□□□□ -1.17
CCNB3-201ENST00000276014 SOGA1O94964 1423 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms