RNA–Protein interactions for RNA: ENST00000274026.9

CCNA2-201, Transcript of cyclin A2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNA2, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA2-201ENST00000274026 ARHGAP35Q9NRY4 1499 aa23.38■■□□□ 1.33
CCNA2-201ENST00000274026 MSH5O43196 834 aa23.36■■□□□ 1.33
CCNA2-201ENST00000274026 ANP32CO43423 234 aa23.36■■□□□ 1.33
CCNA2-201ENST00000274026 SIN3AQ96ST3 1273 aa23.35■■□□□ 1.33
CCNA2-201ENST00000274026 TIMELESSQ9UNS1 1208 aa23.35■■□□□ 1.33
CCNA2-201ENST00000274026 KIF27Q86VH2 1401 aa23.31■■□□□ 1.32
CCNA2-201ENST00000274026 FANCIQ9NVI1 1328 aa23.3■■□□□ 1.32
CCNA2-201ENST00000274026 MAP3K1Q13233 1512 aa23.29■■□□□ 1.32
CCNA2-201ENST00000274026 TIAM1Q13009 1591 aa23.27■■□□□ 1.32
CCNA2-201ENST00000274026 HIRIP3Q9BW71 556 aaPredicted RBP23.24■■□□□ 1.31
CCNA2-201ENST00000274026 CUX1P39880 1505 aa23.21■■□□□ 1.31
CCNA2-201ENST00000274026 CDK11AQ9UQ88 783 aaPredicted RBP23.2■■□□□ 1.3
CCNA2-201ENST00000274026 LRRC9Q6ZRR7 1453 aa23.19■■□□□ 1.3
CCNA2-201ENST00000274026 PHLDB1Q86UU1 1377 aa23.18■■□□□ 1.3
CCNA2-201ENST00000274026 ERICH6Q7L0X2 663 aa23.18■■□□□ 1.3
CCNA2-201ENST00000274026 FAM50AQ14320 339 aaKnown RBP23.16■■□□□ 1.3
CCNA2-201ENST00000274026 MYT1LQ9UL68 1186 aa23.08■■□□□ 1.29
CCNA2-201ENST00000274026 HNRNPUQ00839 825 aaKnown RBP eCLIP23.07■■□□□ 1.28
CCNA2-201ENST00000274026 ERICH6BQ5W0A0 696 aa23.06■■□□□ 1.28
CCNA2-201ENST00000274026 IRX6P78412 446 aaPredicted RBP23.05■■□□□ 1.28
CCNA2-201ENST00000274026 TONSLQ96HA7 1378 aa23.05■■□□□ 1.28
CCNA2-201ENST00000274026 CFAP43Q8NDM7 1665 aa23.03■■□□□ 1.28
CCNA2-201ENST00000274026 FHAD1B1AJZ9 1412 aa23.01■■□□□ 1.27
CCNA2-201ENST00000274026 IGF1RP08069 1367 aa22.99■■□□□ 1.27
CCNA2-201ENST00000274026 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.99■■□□□ 1.27
CCNA2-201ENST00000274026 PPP4R2Q9NY27 417 aa22.98■■□□□ 1.27
CCNA2-201ENST00000274026 PCF11O94913 1555 aaKnown RBP22.94■■□□□ 1.26
CCNA2-201ENST00000274026 CARMIL1Q5VZK9 1371 aa22.91■■□□□ 1.26
CCNA2-201ENST00000274026 DEKP35659 375 aaKnown RBP22.9■■□□□ 1.26
CCNA2-201ENST00000274026 CFTRP13569 1480 aa22.9■■□□□ 1.26
CCNA2-201ENST00000274026 HMGXB3Q12766 1538 aa22.89■■□□□ 1.25
CCNA2-201ENST00000274026 CCDC18Q5T9S5 1454 aa22.88■■□□□ 1.25
CCNA2-201ENST00000274026 UACAQ9BZF9 1416 aa22.87■■□□□ 1.25
CCNA2-201ENST00000274026 ATP1B4Q9UN42 357 aaPredicted RBP22.86■■□□□ 1.25
CCNA2-201ENST00000274026 NCAPD3P42695 1498 aa22.84■■□□□ 1.25
CCNA2-201ENST00000274026 FYCO1Q9BQS8 1478 aa22.82■■□□□ 1.24
CCNA2-201ENST00000274026 P3H3Q8IVL6 736 aa22.82■■□□□ 1.24
CCNA2-201ENST00000274026 HFM1A2PYH4 1435 aa22.82■■□□□ 1.24
CCNA2-201ENST00000274026 KDM5BQ9UGL1 1544 aa22.81■■□□□ 1.24
CCNA2-201ENST00000274026 WASHC2AQ641Q2 1341 aa22.81■■□□□ 1.24
CCNA2-201ENST00000274026 FGD6Q6ZV73 1430 aa22.81■■□□□ 1.24
CCNA2-201ENST00000274026 B4GALNT3Q6L9W6 998 aa22.79■■□□□ 1.24
CCNA2-201ENST00000274026 PTPN23Q9H3S7 1636 aa22.78■■□□□ 1.24
CCNA2-201ENST00000274026 NOP58Q9Y2X3 529 aaKnown RBP22.78■■□□□ 1.24
CCNA2-201ENST00000274026 CASKIN1Q8WXD9 1431 aa22.77■■□□□ 1.24
CCNA2-201ENST00000274026 FGD5Q6ZNL6 1462 aa22.77■■□□□ 1.24
CCNA2-201ENST00000274026 HSPA5P11021 654 aaKnown RBP22.77■■□□□ 1.24
CCNA2-201ENST00000274026 FHOD3Q2V2M9 1422 aa22.75■■□□□ 1.23
CCNA2-201ENST00000274026 AQRO60306 1485 aaKnown RBP eCLIP22.75■■□□□ 1.239e-7■■■□□ 19.2
CCNA2-201ENST00000274026 NCOA2Q15596 1464 aa22.75■■□□□ 1.23
CCNA2-201ENST00000274026 PTPRKQ15262 1439 aa22.74■■□□□ 1.23
CCNA2-201ENST00000274026 CCDC184Q52MB2 194 aa22.74■■□□□ 1.23
CCNA2-201ENST00000274026 CNTLNQ9NXG0 1405 aa22.73■■□□□ 1.23
CCNA2-201ENST00000274026 PRDM2Q13029 1718 aa22.73■■□□□ 1.23
CCNA2-201ENST00000274026 ZBED9Q6R2W3 1325 aa22.73■■□□□ 1.23
CCNA2-201ENST00000274026 NAIPQ13075 1403 aa22.71■■□□□ 1.23
CCNA2-201ENST00000274026 EFCAB5A4FU69 1503 aa22.71■■□□□ 1.23
CCNA2-201ENST00000274026 EIF4G2P78344 907 aaKnown RBP eCLIP22.69■■□□□ 1.22
CCNA2-201ENST00000274026 FAM9BQ8IZU0 186 aa22.68■■□□□ 1.22
CCNA2-201ENST00000274026 PRKRIP1Q9H875 184 aaPredicted RBP22.67■■□□□ 1.22
CCNA2-201ENST00000274026 NBR1Q14596 966 aa22.67■■□□□ 1.22
CCNA2-201ENST00000274026 PAK3O75914 559 aaPredicted RBP22.67■■□□□ 1.22
CCNA2-201ENST00000274026 FMN1Q68DA7 1419 aa22.66■■□□□ 1.22
CCNA2-201ENST00000274026 MRS2Q9HD23 443 aa22.65■■□□□ 1.22
CCNA2-201ENST00000274026 MTUS2Q5JR59 1369 aa22.63■■□□□ 1.21
CCNA2-201ENST00000274026 PRKCSHP14314 528 aaPredicted RBP22.6■■□□□ 1.21
CCNA2-201ENST00000274026 CCDC7Q96M83 1385 aa22.59■■□□□ 1.21
CCNA2-201ENST00000274026 NCOA1Q15788 1441 aa22.59■■□□□ 1.21
CCNA2-201ENST00000274026 MYOM3Q5VTT5 1437 aa22.58■■□□□ 1.2
CCNA2-201ENST00000274026 C11orf95C9JLR9 678 aaPredicted RBP22.56■■□□□ 1.2
CCNA2-201ENST00000274026 SNAPC4Q5SXM2 1469 aa22.56■■□□□ 1.2
CCNA2-201ENST00000274026 ANP32AP39687 249 aaKnown RBP22.56■■□□□ 1.2
CCNA2-201ENST00000274026 IPO9Q96P70 1041 aaKnown RBP22.56■■□□□ 1.2
CCNA2-201ENST00000274026 HECW1Q76N89 1606 aa22.53■■□□□ 1.2
CCNA2-201ENST00000274026 SMG6Q86US8 1419 aaKnown RBP22.53■■□□□ 1.2
CCNA2-201ENST00000274026 DENND4BO75064 1496 aaPredicted RBP22.52■■□□□ 1.2
CCNA2-201ENST00000274026 RTL5Q5HYW3 569 aaPredicted RBP22.52■■□□□ 1.2
CCNA2-201ENST00000274026 CTTNBP2Q8WZ74 1663 aa22.51■■□□□ 1.19
CCNA2-201ENST00000274026 CCDC136Q96JN2 1154 aa22.5■■□□□ 1.19
CCNA2-201ENST00000274026 ZBTB47Q9UFB7 747 aaPredicted RBP22.5■■□□□ 1.19
CCNA2-201ENST00000274026 CADPSQ9ULU8 1353 aa22.5■■□□□ 1.19
CCNA2-201ENST00000274026 AKNAQ7Z591 1439 aa22.49■■□□□ 1.19
CCNA2-201ENST00000274026 L3MBTL2Q969R5 705 aa22.49■■□□□ 1.19
CCNA2-201ENST00000274026 SUPT6HQ7KZ85 1726 aaKnown RBP22.48■■□□□ 1.19
CCNA2-201ENST00000274026 RRP7BPQ9NSQ0 103 aa22.48■■□□□ 1.19
CCNA2-201ENST00000274026 RNF123Q5XPI4 1314 aa22.48■■□□□ 1.19
CCNA2-201ENST00000274026 GCC2Q8IWJ2 1684 aa22.47■■□□□ 1.19
CCNA2-201ENST00000274026 NUDCQ9Y266 331 aa22.46■■□□□ 1.19
CCNA2-201ENST00000274026 LRRIQ1Q96JM4 1722 aa22.46■■□□□ 1.19
CCNA2-201ENST00000274026 CC2D2AQ9P2K1 1620 aa22.44■■□□□ 1.18
CCNA2-201ENST00000274026 CUL7Q14999 1698 aa22.44■■□□□ 1.18
CCNA2-201ENST00000274026 ABCA5Q8WWZ7 1642 aa22.43■■□□□ 1.18
CCNA2-201ENST00000274026 EHBP1L1Q8N3D4 1523 aa22.43■■□□□ 1.18
CCNA2-201ENST00000274026 KIF7Q2M1P5 1343 aa22.42■■□□□ 1.18
CCNA2-201ENST00000274026 MPHOSPH9Q99550 1183 aa22.42■■□□□ 1.18
CCNA2-201ENST00000274026 POLR1AO95602 1720 aaPredicted RBP22.42■■□□□ 1.18
CCNA2-201ENST00000274026 CHIC2Q9UKJ5 165 aa22.41■■□□□ 1.18
CCNA2-201ENST00000274026 ABCA10Q8WWZ4 1543 aa22.41■■□□□ 1.18
CCNA2-201ENST00000274026 UGGT2Q9NYU1 1516 aa22.41■■□□□ 1.18
CCNA2-201ENST00000274026 GRIN2BQ13224 1484 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms