RNA–Protein interactions for RNA: ENST00000274026.9

CCNA2-201, Transcript of cyclin A2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNA2, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA2-201ENST00000274026 NISCHQ9Y2I1 1504 aa32.08■■■□□ 2.73
CCNA2-201ENST00000274026 SHROOM4Q9ULL8 1493 aa28■■■□□ 2.07
CCNA2-201ENST00000274026 HRCP23327 699 aa27.96■■■□□ 2.07
CCNA2-201ENST00000274026 SUPT5HO00267 1087 aaKnown RBP27.83■■■□□ 2.05
CCNA2-201ENST00000274026 MYO15BQ96JP2 1530 aa27.52■■■□□ 2
CCNA2-201ENST00000274026 CHIC1Q5VXU3 224 aa27.43■■□□□ 1.98
CCNA2-201ENST00000274026 PCGF6Q9BYE7 350 aa27.41■■□□□ 1.98
CCNA2-201ENST00000274026 ZCCHC6Q5VYS8 1495 aaKnown RBP27.28■■□□□ 1.96
CCNA2-201ENST00000274026 PPARGC1BQ86YN6 1023 aaKnown RBP27.25■■□□□ 1.95
CCNA2-201ENST00000274026 DCAF1Q9Y4B6 1507 aa27.03■■□□□ 1.92
CCNA2-201ENST00000274026 CCDC180Q9P1Z9 1646 aa26.86■■□□□ 1.89
CCNA2-201ENST00000274026 PELP1Q8IZL8 1130 aaKnown RBP26.73■■□□□ 1.87
CCNA2-201ENST00000274026 TRIM26Q12899 539 aaPredicted RBP26.69■■□□□ 1.86
CCNA2-201ENST00000274026 LOC105371045A0A1W2PR82 267 aa26.68■■□□□ 1.86
CCNA2-201ENST00000274026 ZEB1P37275 1124 aaPredicted RBP26.47■■□□□ 1.83
CCNA2-201ENST00000274026 DCAF8L2P0C7V8 631 aa26.47■■□□□ 1.83
CCNA2-201ENST00000274026 SCAF1Q9H7N4 1312 aaKnown RBP26.26■■□□□ 1.79
CCNA2-201ENST00000274026 ABCC9O60706 1549 aa25.89■■□□□ 1.74
CCNA2-201ENST00000274026 TRIM41Q8WV44 630 aa25.85■■□□□ 1.73
CCNA2-201ENST00000274026 ACIN1Q9UKV3 1341 aaKnown RBP25.75■■□□□ 1.71
CCNA2-201ENST00000274026 RSF1Q96T23 1441 aaPredicted RBP25.71■■□□□ 1.71
CCNA2-201ENST00000274026 FAM9AQ8IZU1 332 aaPredicted RBP25.7■■□□□ 1.7
CCNA2-201ENST00000274026 MYT1Q01538 1121 aa25.66■■□□□ 1.7
CCNA2-201ENST00000274026 NEUROD1Q13562 356 aa25.63■■□□□ 1.69
CCNA2-201ENST00000274026 RB1CC1Q8TDY2 1594 aa25.56■■□□□ 1.68
CCNA2-201ENST00000274026 CENPBP07199 599 aaPredicted RBP25.49■■□□□ 1.67
CCNA2-201ENST00000274026 EHMT2Q96KQ7 1210 aa25.48■■□□□ 1.67
CCNA2-201ENST00000274026 GTF3C3Q9Y5Q9 886 aa25.48■■□□□ 1.67
CCNA2-201ENST00000274026 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.47■■□□□ 1.67
CCNA2-201ENST00000274026 CCER1Q8TC90 406 aaPredicted RBP25.46■■□□□ 1.67
CCNA2-201ENST00000274026 DIEXFQ68CQ4 756 aaKnown RBP25.41■■□□□ 1.66
CCNA2-201ENST00000274026 SCRIBQ14160 1630 aa25.37■■□□□ 1.65
CCNA2-201ENST00000274026 WRNQ14191 1432 aaPredicted RBP eCLIP25.03■■□□□ 1.65e-9■■□□□ 11.7
CCNA2-201ENST00000274026 ZNF316A6NFI3 1004 aaPredicted RBP25.01■■□□□ 1.59
CCNA2-201ENST00000274026 CECR2Q9BXF3 1484 aa25■■□□□ 1.59
CCNA2-201ENST00000274026 MROH2BQ7Z745 1585 aa24.99■■□□□ 1.59
CCNA2-201ENST00000274026 WIZO95785 1651 aa24.91■■□□□ 1.58
CCNA2-201ENST00000274026 EIF4G1Q04637 1599 aaKnown RBP24.89■■□□□ 1.58
CCNA2-201ENST00000274026 TTBK1Q5TCY1 1321 aaPredicted RBP24.87■■□□□ 1.57
CCNA2-201ENST00000274026 YTHDC1Q96MU7 727 aaKnown RBP24.87■■□□□ 1.57
CCNA2-201ENST00000274026 CEP162Q5TB80 1403 aa24.84■■□□□ 1.57
CCNA2-201ENST00000274026 BAZ1AQ9NRL2 1556 aaPredicted RBP24.8■■□□□ 1.56
CCNA2-201ENST00000274026 MIER1Q8N108 512 aa24.76■■□□□ 1.55
CCNA2-201ENST00000274026 TNIKQ9UKE5 1360 aa24.74■■□□□ 1.55
CCNA2-201ENST00000274026 CCDC88BA6NC98 1476 aa24.69■■□□□ 1.54
CCNA2-201ENST00000274026 NACADO15069 1562 aa24.67■■□□□ 1.54
CCNA2-201ENST00000274026 ABCC8Q09428 1581 aa24.65■■□□□ 1.54
CCNA2-201ENST00000274026 SOGA1O94964 1423 aa24.58■■□□□ 1.53
CCNA2-201ENST00000274026 EEA1Q15075 1411 aa24.56■■□□□ 1.52
CCNA2-201ENST00000274026 UBTFP17480 764 aaKnown RBP24.53■■□□□ 1.52
CCNA2-201ENST00000274026 CSRNP3Q8WYN3 585 aa24.53■■□□□ 1.52
CCNA2-201ENST00000274026 TOP2AP11388 1531 aaKnown RBP24.5■■□□□ 1.51
CCNA2-201ENST00000274026 HNRNPUL2Q1KMD3 747 aaKnown RBP24.46■■□□□ 1.51
CCNA2-201ENST00000274026 CLSPNQ9HAW4 1339 aa24.46■■□□□ 1.51
CCNA2-201ENST00000274026 GOLGA3Q08378 1498 aa24.45■■□□□ 1.51
CCNA2-201ENST00000274026 RUSC2Q8N2Y8 1516 aa24.42■■□□□ 1.5
CCNA2-201ENST00000274026 SMARCA2P51531 1590 aa24.4■■□□□ 1.5
CCNA2-201ENST00000274026 SUPT16HQ9Y5B9 1047 aaKnown RBP24.33■■□□□ 1.49
CCNA2-201ENST00000274026 SMARCA4P51532 1647 aa24.27■■□□□ 1.48
CCNA2-201ENST00000274026 CEP164Q9UPV0 1460 aa24.23■■□□□ 1.47
CCNA2-201ENST00000274026 CLIP1P30622 1438 aa24.21■■□□□ 1.47
CCNA2-201ENST00000274026 VPS8Q8N3P4 1428 aa24.21■■□□□ 1.47
CCNA2-201ENST00000274026 KIF21BO75037 1637 aa24.19■■□□□ 1.46
CCNA2-201ENST00000274026 TSHZ2Q9NRE2 1034 aa24.17■■□□□ 1.46
CCNA2-201ENST00000274026 APLP2Q06481 763 aa24.16■■□□□ 1.46
CCNA2-201ENST00000274026 ANP32EQ9BTT0 268 aa24.14■■□□□ 1.45
CCNA2-201ENST00000274026 DHX57Q6P158 1386 aaKnown RBP24.08■■□□□ 1.45
CCNA2-201ENST00000274026 BAZ1BQ9UIG0 1483 aaKnown RBP24.06■■□□□ 1.44
CCNA2-201ENST00000274026 SYNJ1O43426 1573 aa23.98■■□□□ 1.43
CCNA2-201ENST00000274026 RAPGEF2Q9Y4G8 1499 aa23.94■■□□□ 1.42
CCNA2-201ENST00000274026 BCL11AQ9H165 835 aa23.88■■□□□ 1.41
CCNA2-201ENST00000274026 RANGAP1P46060 587 aaPredicted RBP23.84■■□□□ 1.41
CCNA2-201ENST00000274026 UNC13AQ9UPW8 1703 aa23.8■■□□□ 1.4
CCNA2-201ENST00000274026 KCNH8Q96L42 1107 aa23.77■■□□□ 1.4
CCNA2-201ENST00000274026 RRBP1Q9P2E9 1410 aaKnown RBP23.77■■□□□ 1.39
CCNA2-201ENST00000274026 CUX2O14529 1486 aa23.76■■□□□ 1.39
CCNA2-201ENST00000274026 BCANQ96GW7 911 aa23.74■■□□□ 1.39
CCNA2-201ENST00000274026 KANK4Q5T7N3 995 aaPredicted RBP23.73■■□□□ 1.39
CCNA2-201ENST00000274026 PEG3Q9GZU2 1588 aa23.73■■□□□ 1.39
CCNA2-201ENST00000274026 ARAP1Q96P48 1450 aa23.72■■□□□ 1.39
CCNA2-201ENST00000274026 FKBP8Q14318 412 aa23.72■■□□□ 1.39
CCNA2-201ENST00000274026 ERICH3Q5RHP9 1530 aa23.66■■□□□ 1.38
CCNA2-201ENST00000274026 RBM19Q9Y4C8 960 aaKnown RBP23.63■■□□□ 1.37
CCNA2-201ENST00000274026 CCNB3Q8WWL7 1395 aa23.62■■□□□ 1.37
CCNA2-201ENST00000274026 TOP2BQ02880 1626 aa23.6■■□□□ 1.37
CCNA2-201ENST00000274026 PRXQ9BXM0 1461 aa23.6■■□□□ 1.37
CCNA2-201ENST00000274026 NEFLP07196 543 aa23.59■■□□□ 1.37
CCNA2-201ENST00000274026 MAPKBP1O60336 1514 aa23.56■■□□□ 1.36
CCNA2-201ENST00000274026 DDX10Q13206 875 aaKnown RBP23.54■■□□□ 1.36
CCNA2-201ENST00000274026 PABPN1Q86U42 306 aaKnown RBP eCLIP23.54■■□□□ 1.36
CCNA2-201ENST00000274026 RAB3GAP2Q9H2M9 1393 aa23.53■■□□□ 1.36
CCNA2-201ENST00000274026 ITGAEP38570 1179 aa23.51■■□□□ 1.35
CCNA2-201ENST00000274026 BIVM-ERCC5R4GMW8 1640 aa23.49■■□□□ 1.35
CCNA2-201ENST00000274026 PPP1R15AO75807 674 aaPredicted RBP23.46■■□□□ 1.35
CCNA2-201ENST00000274026 ATAD2BQ9ULI0 1458 aa23.46■■□□□ 1.35
CCNA2-201ENST00000274026 WDR97A6NE52 1622 aa23.45■■□□□ 1.35
CCNA2-201ENST00000274026 BICRAQ9NZM4 1560 aa23.45■■□□□ 1.34
CCNA2-201ENST00000274026 CCER2I3L3R5 266 aa23.45■■□□□ 1.34
CCNA2-201ENST00000274026 SETD5Q9C0A6 1442 aa23.4■■□□□ 1.34
CCNA2-201ENST00000274026 TRIM52Q96A61 297 aa23.39■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms