RNA–Protein interactions for RNA: ENST00000269347.10

RAB40B-201, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 2,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-201ENST00000269347 PBRM1Q86U86 1689 aa35.39■■■■□ 3.26
RAB40B-201ENST00000269347 ZNF608Q9ULD9 1512 aaPredicted RBP35.34■■■■□ 3.25
RAB40B-201ENST00000269347 FHOD3Q2V2M9 1422 aa35.34■■■■□ 3.25
RAB40B-201ENST00000269347 HNRNPUL2Q1KMD3 747 aaKnown RBP35.34■■■■□ 3.25
RAB40B-201ENST00000269347 CCER1Q8TC90 406 aaPredicted RBP35.31■■■■□ 3.24
RAB40B-201ENST00000269347 PCF11O94913 1555 aaKnown RBP35.27■■■■□ 3.24
RAB40B-201ENST00000269347 ERCC6Q03468 1493 aa35.24■■■■□ 3.23
RAB40B-201ENST00000269347 THOC2Q8NI27 1593 aaKnown RBP35.24■■■■□ 3.23
RAB40B-201ENST00000269347 TIAM1Q13009 1591 aa35.23■■■■□ 3.23
RAB40B-201ENST00000269347 EFCAB5A4FU69 1503 aa35.2■■■■□ 3.23
RAB40B-201ENST00000269347 IFT140Q96RY7 1462 aa35.2■■■■□ 3.22
RAB40B-201ENST00000269347 ADAMTS12P58397 1594 aa35.19■■■■□ 3.22
RAB40B-201ENST00000269347 SAMD9Q5K651 1589 aa35.14■■■■□ 3.22
RAB40B-201ENST00000269347 FHAD1B1AJZ9 1412 aa35.13■■■■□ 3.21
RAB40B-201ENST00000269347 GRIN2BQ13224 1484 aa35.13■■■■□ 3.21
RAB40B-201ENST00000269347 MAP3K1Q13233 1512 aa35.11■■■■□ 3.21
RAB40B-201ENST00000269347 CFAP43Q8NDM7 1665 aa35.08■■■■□ 3.21
RAB40B-201ENST00000269347 RRBP1Q9P2E9 1410 aaKnown RBP35.08■■■■□ 3.21
RAB40B-201ENST00000269347 EIF4G3O43432 1585 aaKnown RBP35.07■■■■□ 3.21
RAB40B-201ENST00000269347 LRRC9Q6ZRR7 1453 aa35.07■■■■□ 3.2
RAB40B-201ENST00000269347 ATP1B4Q9UN42 357 aaPredicted RBP35.04■■■■□ 3.2
RAB40B-201ENST00000269347 SNAPC4Q5SXM2 1469 aa35.02■■■■□ 3.2
RAB40B-201ENST00000269347 CASKIN1Q8WXD9 1431 aa35.02■■■■□ 3.2
RAB40B-201ENST00000269347 FYCO1Q9BQS8 1478 aa35■■■■□ 3.19
RAB40B-201ENST00000269347 LRRIQ1Q96JM4 1722 aa35■■■■□ 3.19
RAB40B-201ENST00000269347 PHLDB1Q86UU1 1377 aa34.94■■■■□ 3.18
RAB40B-201ENST00000269347 IQGAP2Q13576 1575 aa34.92■■■■□ 3.18
RAB40B-201ENST00000269347 CCNB3Q8WWL7 1395 aa34.92■■■■□ 3.18
RAB40B-201ENST00000269347 FMN1Q68DA7 1419 aa34.92■■■■□ 3.18
RAB40B-201ENST00000269347 GRIN2AQ12879 1464 aa34.8■■■■□ 3.16
RAB40B-201ENST00000269347 ITGAEP38570 1179 aa34.78■■■■□ 3.16
RAB40B-201ENST00000269347 UGGT2Q9NYU1 1516 aa34.72■■■■□ 3.15
RAB40B-201ENST00000269347 MAGI1Q96QZ7 1491 aaPredicted RBP34.7■■■■□ 3.14
RAB40B-201ENST00000269347 KIAA0586Q9BVV6 1533 aa34.69■■■■□ 3.14
RAB40B-201ENST00000269347 CEP170Q5SW79 1584 aa34.68■■■■□ 3.14
RAB40B-201ENST00000269347 MAGI3Q5TCQ9 1506 aa34.67■■■■□ 3.14
RAB40B-201ENST00000269347 DISP1Q96F81 1524 aa34.67■■■■□ 3.14
RAB40B-201ENST00000269347 SYNJ2O15056 1496 aa34.64■■■■□ 3.14
RAB40B-201ENST00000269347 DHX57Q6P158 1386 aaKnown RBP34.64■■■■□ 3.14
RAB40B-201ENST00000269347 KIAA0556O60303 1618 aa34.61■■■■□ 3.13
RAB40B-201ENST00000269347 FBLN2P98095 1184 aa34.59■■■■□ 3.13
RAB40B-201ENST00000269347 FAM50AQ14320 339 aaKnown RBP34.59■■■■□ 3.13
RAB40B-201ENST00000269347 CHMP7Q8WUX9 453 aaPredicted RBP34.59■■■■□ 3.13
RAB40B-201ENST00000269347 MTUS2Q5JR59 1369 aa34.58■■■■□ 3.13
RAB40B-201ENST00000269347 CDK13Q14004 1512 aaKnown RBP34.54■■■■□ 3.12
RAB40B-201ENST00000269347 ARID3CA6NKF2 412 aa34.53■■■■□ 3.12
RAB40B-201ENST00000269347 HECW1Q76N89 1606 aa34.53■■■■□ 3.12
RAB40B-201ENST00000269347 NCOA2Q15596 1464 aa34.51■■■■□ 3.12
RAB40B-201ENST00000269347 EPRSP07814 1512 aaKnown RBP34.51■■■■□ 3.11
RAB40B-201ENST00000269347 FGD6Q6ZV73 1430 aa34.49■■■■□ 3.11
RAB40B-201ENST00000269347 RAB3GAP2Q9H2M9 1393 aa34.47■■■■□ 3.11
RAB40B-201ENST00000269347 NUP160Q12769 1436 aa34.47■■■■□ 3.11
RAB40B-201ENST00000269347 EHBP1L1Q8N3D4 1523 aa34.46■■■■□ 3.11
RAB40B-201ENST00000269347 CCDC18Q5T9S5 1454 aa34.44■■■■□ 3.1
RAB40B-201ENST00000269347 SUPT6HQ7KZ85 1726 aaKnown RBP34.44■■■■□ 3.1
RAB40B-201ENST00000269347 ARHGEF11O15085 1522 aa34.43■■■■□ 3.1
RAB40B-201ENST00000269347 PTPRKQ15262 1439 aa34.37■■■■□ 3.09
RAB40B-201ENST00000269347 NUP153P49790 1475 aaKnown RBP34.37■■■■□ 3.09
RAB40B-201ENST00000269347 MYOM3Q5VTT5 1437 aa34.36■■■■□ 3.09
RAB40B-201ENST00000269347 SETD5Q9C0A6 1442 aa34.36■■■■□ 3.09
RAB40B-201ENST00000269347 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.35■■■■□ 3.09
RAB40B-201ENST00000269347 RAPGEF6Q8TEU7 1601 aa34.34■■■■□ 3.09
RAB40B-201ENST00000269347 JPH4Q96JJ6 628 aa34.32■■■■□ 3.08
RAB40B-201ENST00000269347 PLB1Q6P1J6 1458 aa34.28■■■■□ 3.08
RAB40B-201ENST00000269347 MAPKBP1O60336 1514 aa34.27■■■■□ 3.08
RAB40B-201ENST00000269347 CLSPNQ9HAW4 1339 aa34.26■■■■□ 3.07
RAB40B-201ENST00000269347 PTPN23Q9H3S7 1636 aa34.26■■■■□ 3.07
RAB40B-201ENST00000269347 CHD1O14646 1710 aa34.24■■■■□ 3.07
RAB40B-201ENST00000269347 CARMIL2Q6F5E8 1435 aa34.12■■■■□ 3.05
RAB40B-201ENST00000269347 ZNF316A6NFI3 1004 aaPredicted RBP34.12■■■■□ 3.05
RAB40B-201ENST00000269347 TCOF1Q13428 1488 aaKnown RBP34.12■■■■□ 3.05
RAB40B-201ENST00000269347 PRG4Q92954 1404 aaPredicted RBP34.09■■■■□ 3.05
RAB40B-201ENST00000269347 DIEXFQ68CQ4 756 aaKnown RBP34.05■■■■□ 3.04
RAB40B-201ENST00000269347 HFM1A2PYH4 1435 aa34.05■■■■□ 3.04
RAB40B-201ENST00000269347 ABCA8O94911 1581 aa34.04■■■■□ 3.04
RAB40B-201ENST00000269347 NAIPQ13075 1403 aa34.03■■■■□ 3.04
RAB40B-201ENST00000269347 KIF14Q15058 1648 aa34■■■■□ 3.03
RAB40B-201ENST00000269347 CHIC2Q9UKJ5 165 aa33.99■■■■□ 3.03
RAB40B-201ENST00000269347 MIA2Q96PC5 1412 aa33.99■■■■□ 3.03
RAB40B-201ENST00000269347 SIN3AQ96ST3 1273 aa33.98■■■■□ 3.03
RAB40B-201ENST00000269347 ZNF644Q9H582 1327 aaPredicted RBP33.98■■■■□ 3.03
RAB40B-201ENST00000269347 TROQ12816 1431 aaPredicted RBP33.96■■■■□ 3.03
RAB40B-201ENST00000269347 ERCC6L2Q5T890 1561 aa33.94■■■■□ 3.02
RAB40B-201ENST00000269347 RRP7BPQ9NSQ0 103 aa33.94■■■■□ 3.02
RAB40B-201ENST00000269347 KDM6BO15054 1643 aa33.93■■■■□ 3.02
RAB40B-201ENST00000269347 ATP10BO94823 1461 aa33.91■■■■□ 3.02
RAB40B-201ENST00000269347 SHROOM2Q13796 1616 aa33.91■■■■□ 3.02
RAB40B-201ENST00000269347 CDK11AQ9UQ88 783 aaPredicted RBP33.88■■■■□ 3.01
RAB40B-201ENST00000269347 ADCY10Q96PN6 1610 aa33.88■■■■□ 3.01
RAB40B-201ENST00000269347 GCC2Q8IWJ2 1684 aa33.85■■■■□ 3.01
RAB40B-201ENST00000269347 PTPRGP23470 1445 aa33.85■■■■□ 3.01
RAB40B-201ENST00000269347 NEUROD1Q13562 356 aa33.83■■■■□ 3.01
RAB40B-201ENST00000269347 GPATCH8Q9UKJ3 1502 aaKnown RBP33.83■■■■□ 3.01
RAB40B-201ENST00000269347 UACAQ9BZF9 1416 aa33.81■■■■□ 3
RAB40B-201ENST00000269347 ABCC5O15440 1437 aa33.81■■■■□ 3
RAB40B-201ENST00000269347 DAPK1P53355 1430 aa33.8■■■■□ 3
RAB40B-201ENST00000269347 DNMT1P26358 1616 aaKnown RBP33.8■■■■□ 3
RAB40B-201ENST00000269347 DENND4BO75064 1496 aaPredicted RBP33.76■■■□□ 2.99
RAB40B-201ENST00000269347 CAMSAP2Q08AD1 1489 aa33.74■■■□□ 2.99
RAB40B-201ENST00000269347 CDC42BPAQ5VT25 1732 aa33.74■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms