RNA–Protein interactions for RNA: ENST00000265806.10

R3HCC1-201, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HCC1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-201ENST00000265806 ARAP1Q96P48 1450 aa38.45■■■■□ 3.75
R3HCC1-201ENST00000265806 SYNJ2O15056 1496 aa38.37■■■■□ 3.73
R3HCC1-201ENST00000265806 GRIN2AQ12879 1464 aa38.35■■■■□ 3.73
R3HCC1-201ENST00000265806 EFCAB5A4FU69 1503 aa38.32■■■■□ 3.73
R3HCC1-201ENST00000265806 CHMP7Q8WUX9 453 aaPredicted RBP38.24■■■■□ 3.71
R3HCC1-201ENST00000265806 IQGAP2Q13576 1575 aa38.22■■■■□ 3.71
R3HCC1-201ENST00000265806 KIAA0586Q9BVV6 1533 aa38.18■■■■□ 3.7
R3HCC1-201ENST00000265806 SAMD9Q5K651 1589 aa38.17■■■■□ 3.7
R3HCC1-201ENST00000265806 TRIM26Q12899 539 aaPredicted RBP38.16■■■■□ 3.7
R3HCC1-201ENST00000265806 NUP160Q12769 1436 aa38.11■■■■□ 3.69
R3HCC1-201ENST00000265806 CEP170Q5SW79 1584 aa38.09■■■■□ 3.69
R3HCC1-201ENST00000265806 FBLN2P98095 1184 aa38.08■■■■□ 3.69
R3HCC1-201ENST00000265806 FHOD3Q2V2M9 1422 aa38.08■■■■□ 3.69
R3HCC1-201ENST00000265806 PPARGC1BQ86YN6 1023 aaKnown RBP38.08■■■■□ 3.69
R3HCC1-201ENST00000265806 UGGT2Q9NYU1 1516 aa38.07■■■■□ 3.68
R3HCC1-201ENST00000265806 P3H3Q8IVL6 736 aa38.06■■■■□ 3.68
R3HCC1-201ENST00000265806 APLP2Q06481 763 aa38.04■■■■□ 3.68
R3HCC1-201ENST00000265806 PCGF6Q9BYE7 350 aa38.04■■■■□ 3.68
R3HCC1-201ENST00000265806 FMN1Q68DA7 1419 aa37.97■■■■□ 3.67
R3HCC1-201ENST00000265806 CHD1O14646 1710 aa37.92■■■■□ 3.66
R3HCC1-201ENST00000265806 PCF11O94913 1555 aaKnown RBP37.9■■■■□ 3.66
R3HCC1-201ENST00000265806 MAP3K1Q13233 1512 aa37.88■■■■□ 3.65
R3HCC1-201ENST00000265806 CASKIN1Q8WXD9 1431 aa37.87■■■■□ 3.65
R3HCC1-201ENST00000265806 FYCO1Q9BQS8 1478 aa37.87■■■■□ 3.65
R3HCC1-201ENST00000265806 DISP1Q96F81 1524 aa37.85■■■■□ 3.65
R3HCC1-201ENST00000265806 KIAA0556O60303 1618 aa37.83■■■■□ 3.65
R3HCC1-201ENST00000265806 TTBK1Q5TCY1 1321 aaPredicted RBP37.78■■■■□ 3.64
R3HCC1-201ENST00000265806 JPH4Q96JJ6 628 aa37.78■■■■□ 3.64
R3HCC1-201ENST00000265806 TIAM1Q13009 1591 aa37.77■■■■□ 3.64
R3HCC1-201ENST00000265806 KANK4Q5T7N3 995 aaPredicted RBP37.71■■■■□ 3.63
R3HCC1-201ENST00000265806 CFAP43Q8NDM7 1665 aa37.69■■■■□ 3.62
R3HCC1-201ENST00000265806 CARMIL2Q6F5E8 1435 aa37.69■■■■□ 3.62
R3HCC1-201ENST00000265806 ATP1B4Q9UN42 357 aaPredicted RBP37.63■■■■□ 3.61
R3HCC1-201ENST00000265806 LRRC9Q6ZRR7 1453 aa37.6■■■■□ 3.61
R3HCC1-201ENST00000265806 SHROOM2Q13796 1616 aa37.58■■■■□ 3.61
R3HCC1-201ENST00000265806 HECW1Q76N89 1606 aa37.56■■■■□ 3.6
R3HCC1-201ENST00000265806 CLASP1Q7Z460 1538 aa37.54■■■■□ 3.6
R3HCC1-201ENST00000265806 LRRIQ1Q96JM4 1722 aa37.53■■■■□ 3.6
R3HCC1-201ENST00000265806 PRG4Q92954 1404 aaPredicted RBP37.52■■■■□ 3.6
R3HCC1-201ENST00000265806 CCDC18Q5T9S5 1454 aa37.5■■■■□ 3.59
R3HCC1-201ENST00000265806 RAPGEF6Q8TEU7 1601 aa37.45■■■■□ 3.58
R3HCC1-201ENST00000265806 EPRSP07814 1512 aaKnown RBP37.43■■■■□ 3.58
R3HCC1-201ENST00000265806 NUP153P49790 1475 aaKnown RBP37.36■■■■□ 3.57
R3HCC1-201ENST00000265806 PLB1Q6P1J6 1458 aa37.34■■■■□ 3.57
R3HCC1-201ENST00000265806 MTUS2Q5JR59 1369 aa37.34■■■■□ 3.57
R3HCC1-201ENST00000265806 RRBP1Q9P2E9 1410 aaKnown RBP37.33■■■■□ 3.57
R3HCC1-201ENST00000265806 ABCA8O94911 1581 aa37.3■■■■□ 3.56
R3HCC1-201ENST00000265806 PTPRGP23470 1445 aa37.3■■■■□ 3.56
R3HCC1-201ENST00000265806 EHBP1L1Q8N3D4 1523 aa37.3■■■■□ 3.56
R3HCC1-201ENST00000265806 CDK13Q14004 1512 aaKnown RBP37.29■■■■□ 3.56
R3HCC1-201ENST00000265806 ERCC6L2Q5T890 1561 aa37.25■■■■□ 3.55
R3HCC1-201ENST00000265806 MAGI3Q5TCQ9 1506 aa37.24■■■■□ 3.55
R3HCC1-201ENST00000265806 PHLDB1Q86UU1 1377 aa37.23■■■■□ 3.55
R3HCC1-201ENST00000265806 OSCARQ8IYS5 282 aa37.19■■■■□ 3.54
R3HCC1-201ENST00000265806 CCNB3Q8WWL7 1395 aa37.19■■■■□ 3.54
R3HCC1-201ENST00000265806 SUPT6HQ7KZ85 1726 aaKnown RBP37.18■■■■□ 3.54
R3HCC1-201ENST00000265806 NCOA2Q15596 1464 aa37.14■■■■□ 3.54
R3HCC1-201ENST00000265806 ARID3CA6NKF2 412 aa37.14■■■■□ 3.54
R3HCC1-201ENST00000265806 ARHGEF11O15085 1522 aa37.12■■■■□ 3.53
R3HCC1-201ENST00000265806 CDK11AQ9UQ88 783 aaPredicted RBP37.12■■■■□ 3.53
R3HCC1-201ENST00000265806 UACAQ9BZF9 1416 aa37.1■■■■□ 3.53
R3HCC1-201ENST00000265806 ATP10BO94823 1461 aa37.05■■■■□ 3.52
R3HCC1-201ENST00000265806 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.04■■■■□ 3.52
R3HCC1-201ENST00000265806 HNRNPUL2Q1KMD3 747 aaKnown RBP37.04■■■■□ 3.52
R3HCC1-201ENST00000265806 TROQ12816 1431 aaPredicted RBP37.01■■■■□ 3.51
R3HCC1-201ENST00000265806 MYOM3Q5VTT5 1437 aa37.01■■■■□ 3.51
R3HCC1-201ENST00000265806 ABCC2Q92887 1545 aa36.99■■■■□ 3.51
R3HCC1-201ENST00000265806 FGD6Q6ZV73 1430 aa36.99■■■■□ 3.51
R3HCC1-201ENST00000265806 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP36.99■■■■□ 3.51
R3HCC1-201ENST00000265806 UHRF1BP1LA0JNW5 1464 aa36.94■■■■□ 3.5
R3HCC1-201ENST00000265806 HRCP23327 699 aa36.91■■■■□ 3.5
R3HCC1-201ENST00000265806 ADCY10Q96PN6 1610 aa36.9■■■■□ 3.5
R3HCC1-201ENST00000265806 PLEKHD1A6NEE1 506 aa36.88■■■■□ 3.49
R3HCC1-201ENST00000265806 FAM50AQ14320 339 aaKnown RBP36.86■■■■□ 3.49
R3HCC1-201ENST00000265806 MIA2Q96PC5 1412 aa36.83■■■■□ 3.49
R3HCC1-201ENST00000265806 PTPN23Q9H3S7 1636 aa36.79■■■■□ 3.48
R3HCC1-201ENST00000265806 TCOF1Q13428 1488 aaKnown RBP36.78■■■■□ 3.48
R3HCC1-201ENST00000265806 KIF14Q15058 1648 aa36.78■■■■□ 3.48
R3HCC1-201ENST00000265806 KDM5BQ9UGL1 1544 aa36.78■■■■□ 3.48
R3HCC1-201ENST00000265806 ITGAEP38570 1179 aa36.73■■■■□ 3.47
R3HCC1-201ENST00000265806 ZCCHC11Q5TAX3 1644 aaKnown RBP36.71■■■■□ 3.47
R3HCC1-201ENST00000265806 ABCC10Q5T3U5 1492 aa36.69■■■■□ 3.46
R3HCC1-201ENST00000265806 ITSN2Q9NZM3 1697 aa36.68■■■■□ 3.46
R3HCC1-201ENST00000265806 GPATCH8Q9UKJ3 1502 aaKnown RBP36.66■■■■□ 3.46
R3HCC1-201ENST00000265806 CCER1Q8TC90 406 aaPredicted RBP36.61■■■■□ 3.45
R3HCC1-201ENST00000265806 ZEB1P37275 1124 aaPredicted RBP36.59■■■■□ 3.45
R3HCC1-201ENST00000265806 CDC42BPAQ5VT25 1732 aa36.56■■■■□ 3.44
R3HCC1-201ENST00000265806 CFDP1Q9UEE9 299 aaPredicted RBP36.55■■■■□ 3.44
R3HCC1-201ENST00000265806 PTPRKQ15262 1439 aa36.54■■■■□ 3.44
R3HCC1-201ENST00000265806 SETD5Q9C0A6 1442 aa36.51■■■■□ 3.44
R3HCC1-201ENST00000265806 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.48■■■■□ 3.43
R3HCC1-201ENST00000265806 CAMSAP2Q08AD1 1489 aa36.47■■■■□ 3.43
R3HCC1-201ENST00000265806 ZNF644Q9H582 1327 aaPredicted RBP36.45■■■■□ 3.43
R3HCC1-201ENST00000265806 RAB3GAP2Q9H2M9 1393 aa36.45■■■■□ 3.43
R3HCC1-201ENST00000265806 DNMT1P26358 1616 aaKnown RBP36.44■■■■□ 3.42
R3HCC1-201ENST00000265806 TTC37Q6PGP7 1564 aa36.44■■■■□ 3.42
R3HCC1-201ENST00000265806 PREX2Q70Z35 1606 aa36.43■■■■□ 3.42
R3HCC1-201ENST00000265806 WDR7Q9Y4E6 1490 aa36.42■■■■□ 3.42
R3HCC1-201ENST00000265806 HFM1A2PYH4 1435 aa36.42■■■■□ 3.42
R3HCC1-201ENST00000265806 DAPK1P53355 1430 aa36.4■■■■□ 3.42
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms