RNA–Protein interactions for RNA: ENST00000265735.11

SGCE-201, Transcript of sarcoglycan epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCE, Length 1,694 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-201ENST00000265735 RAPGEF2Q9Y4G8 1499 aa21.18■□□□□ 0.98
SGCE-201ENST00000265735 KIAA0586Q9BVV6 1533 aa21.18■□□□□ 0.98
SGCE-201ENST00000265735 CYB5RLQ6IPT4 315 aa21.17■□□□□ 0.98
SGCE-201ENST00000265735 ERCC6L2Q5T890 1561 aa21.15■□□□□ 0.98
SGCE-201ENST00000265735 JPH4Q96JJ6 628 aa21.15■□□□□ 0.98
SGCE-201ENST00000265735 PRXQ9BXM0 1461 aa21.13■□□□□ 0.97
SGCE-201ENST00000265735 EEA1Q15075 1411 aa21.11■□□□□ 0.97
SGCE-201ENST00000265735 PRG4Q92954 1404 aaPredicted RBP21.1■□□□□ 0.97
SGCE-201ENST00000265735 CSRNP3Q8WYN3 585 aa21.08■□□□□ 0.96
SGCE-201ENST00000265735 IQGAP2Q13576 1575 aa21.05■□□□□ 0.96
SGCE-201ENST00000265735 CTTNBP2Q8WZ74 1663 aa20.99■□□□□ 0.95
SGCE-201ENST00000265735 UGGT2Q9NYU1 1516 aa20.96■□□□□ 0.95
SGCE-201ENST00000265735 FAM9AQ8IZU1 332 aaPredicted RBP20.94■□□□□ 0.94
SGCE-201ENST00000265735 DISP1Q96F81 1524 aa20.92■□□□□ 0.94
SGCE-201ENST00000265735 CARMIL2Q6F5E8 1435 aa20.92■□□□□ 0.94
SGCE-201ENST00000265735 KIF21BO75037 1637 aa20.9■□□□□ 0.94
SGCE-201ENST00000265735 TNIKQ9UKE5 1360 aa20.86■□□□□ 0.93
SGCE-201ENST00000265735 KIAA0556O60303 1618 aa20.85■□□□□ 0.93
SGCE-201ENST00000265735 PTPRGP23470 1445 aa20.85■□□□□ 0.93
SGCE-201ENST00000265735 ADCY10Q96PN6 1610 aa20.81■□□□□ 0.92
SGCE-201ENST00000265735 GOLGA3Q08378 1498 aa20.81■□□□□ 0.92
SGCE-201ENST00000265735 SAMD9Q5K651 1589 aa20.74■□□□□ 0.91
SGCE-201ENST00000265735 UHRF1BP1LA0JNW5 1464 aa20.73■□□□□ 0.91
SGCE-201ENST00000265735 TTBK1Q5TCY1 1321 aaPredicted RBP20.72■□□□□ 0.91
SGCE-201ENST00000265735 UACAQ9BZF9 1416 aa20.72■□□□□ 0.91
SGCE-201ENST00000265735 TRHP20396 242 aaPredicted RBP20.7■□□□□ 0.91
SGCE-201ENST00000265735 MAPKBP1O60336 1514 aa20.69■□□□□ 0.9
SGCE-201ENST00000265735 ABCC2Q92887 1545 aa20.69■□□□□ 0.9
SGCE-201ENST00000265735 NPM1P06748 294 aaKnown RBP eCLIP20.68■□□□□ 0.9
SGCE-201ENST00000265735 UBTFP17480 764 aaKnown RBP20.66■□□□□ 0.9
SGCE-201ENST00000265735 ABCA8O94911 1581 aa20.64■□□□□ 0.9
SGCE-201ENST00000265735 PLB1Q6P1J6 1458 aa20.64■□□□□ 0.89
SGCE-201ENST00000265735 P3H3Q8IVL6 736 aa20.64■□□□□ 0.89
SGCE-201ENST00000265735 KDM5BQ9UGL1 1544 aa20.63■□□□□ 0.89
SGCE-201ENST00000265735 EHMT2Q96KQ7 1210 aa20.63■□□□□ 0.89
SGCE-201ENST00000265735 EFCAB5A4FU69 1503 aa20.62■□□□□ 0.89
SGCE-201ENST00000265735 KIF13AQ9H1H9 1805 aa20.6■□□□□ 0.89
SGCE-201ENST00000265735 RANGAP1P46060 587 aaPredicted RBP20.58■□□□□ 0.89
SGCE-201ENST00000265735 ABCC10Q5T3U5 1492 aa20.58■□□□□ 0.89
SGCE-201ENST00000265735 ZCCHC11Q5TAX3 1644 aaKnown RBP20.57■□□□□ 0.88
SGCE-201ENST00000265735 FHOD3Q2V2M9 1422 aa20.56■□□□□ 0.88
SGCE-201ENST00000265735 DIP2BQ9P265 1576 aa20.54■□□□□ 0.88
SGCE-201ENST00000265735 ASXL2Q76L83 1435 aa20.53■□□□□ 0.88
SGCE-201ENST00000265735 ARHGAP35Q9NRY4 1499 aa20.52■□□□□ 0.88
SGCE-201ENST00000265735 RAPGEF6Q8TEU7 1601 aa20.51■□□□□ 0.87
SGCE-201ENST00000265735 FAM69CQ0P6D2 419 aa20.49■□□□□ 0.87
SGCE-201ENST00000265735 ATP10BO94823 1461 aa20.47■□□□□ 0.87
SGCE-201ENST00000265735 GLI2P10070 1586 aa20.45■□□□□ 0.86
SGCE-201ENST00000265735 NUP153P49790 1475 aaKnown RBP20.44■□□□□ 0.86
SGCE-201ENST00000265735 WDR7Q9Y4E6 1490 aa20.43■□□□□ 0.86
SGCE-201ENST00000265735 EPRSP07814 1512 aaKnown RBP20.43■□□□□ 0.86
SGCE-201ENST00000265735 FMN1Q68DA7 1419 aa20.42■□□□□ 0.86
SGCE-201ENST00000265735 ARID3CA6NKF2 412 aa20.37■□□□□ 0.85
SGCE-201ENST00000265735 CLIP1P30622 1438 aa20.36■□□□□ 0.85
SGCE-201ENST00000265735 MAP3K4Q9Y6R4 1608 aa20.36■□□□□ 0.85
SGCE-201ENST00000265735 TSPOAP1O95153 1857 aa20.35■□□□□ 0.85
SGCE-201ENST00000265735 PPRC1Q5VV67 1664 aaKnown RBP20.33■□□□□ 0.85
SGCE-201ENST00000265735 HECW1Q76N89 1606 aa20.32■□□□□ 0.84
SGCE-201ENST00000265735 LOC105371045A0A1W2PR82 267 aa20.32■□□□□ 0.84
SGCE-201ENST00000265735 KCNH8Q96L42 1107 aa20.3■□□□□ 0.84
SGCE-201ENST00000265735 CFAP43Q8NDM7 1665 aa20.29■□□□□ 0.84
SGCE-201ENST00000265735 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.29■□□□□ 0.84
SGCE-201ENST00000265735 HNRNPUL2Q1KMD3 747 aaKnown RBP20.29■□□□□ 0.84
SGCE-201ENST00000265735 CDK13Q14004 1512 aaKnown RBP20.28■□□□□ 0.84
SGCE-201ENST00000265735 CEP162Q5TB80 1403 aa20.28■□□□□ 0.84
SGCE-201ENST00000265735 CASKIN1Q8WXD9 1431 aa20.27■□□□□ 0.84
SGCE-201ENST00000265735 LRRIQ1Q96JM4 1722 aa20.27■□□□□ 0.83
SGCE-201ENST00000265735 PLEKHD1A6NEE1 506 aa20.26■□□□□ 0.83
SGCE-201ENST00000265735 PCF11O94913 1555 aaKnown RBP20.25■□□□□ 0.83
SGCE-201ENST00000265735 ABCA9Q8IUA7 1624 aa20.25■□□□□ 0.83
SGCE-201ENST00000265735 CD109Q6YHK3 1445 aa20.24■□□□□ 0.83
SGCE-201ENST00000265735 MAGI3Q5TCQ9 1506 aa20.23■□□□□ 0.83
SGCE-201ENST00000265735 TEX14Q8IWB6 1497 aa20.23■□□□□ 0.83
SGCE-201ENST00000265735 ATP1B4Q9UN42 357 aaPredicted RBP20.22■□□□□ 0.83
SGCE-201ENST00000265735 FYCO1Q9BQS8 1478 aa20.21■□□□□ 0.83
SGCE-201ENST00000265735 KDM6BO15054 1643 aa20.19■□□□□ 0.82
SGCE-201ENST00000265735 CCDC18Q5T9S5 1454 aa20.18■□□□□ 0.82
SGCE-201ENST00000265735 CDK11AQ9UQ88 783 aaPredicted RBP20.16■□□□□ 0.82
SGCE-201ENST00000265735 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.16■□□□□ 0.82
SGCE-201ENST00000265735 COL17A1Q9UMD9 1497 aaPredicted RBP20.13■□□□□ 0.81
SGCE-201ENST00000265735 TROQ12816 1431 aaPredicted RBP20.13■□□□□ 0.81
SGCE-201ENST00000265735 TTC37Q6PGP7 1564 aa20.11■□□□□ 0.81
SGCE-201ENST00000265735 PHLDB1Q86UU1 1377 aa20.08■□□□□ 0.81
SGCE-201ENST00000265735 KIF14Q15058 1648 aa20.08■□□□□ 0.8
SGCE-201ENST00000265735 NEO1Q92859 1461 aa20.08■□□□□ 0.8
SGCE-201ENST00000265735 ARAP3Q8WWN8 1544 aa20.07■□□□□ 0.8
SGCE-201ENST00000265735 VPS8Q8N3P4 1428 aa20.05■□□□□ 0.8
SGCE-201ENST00000265735 PLCH2O75038 1416 aa20.04■□□□□ 0.8
SGCE-201ENST00000265735 MYO5CQ9NQX4 1742 aa20.02■□□□□ 0.8
SGCE-201ENST00000265735 FANCAO15360 1455 aa20.01■□□□□ 0.79
SGCE-201ENST00000265735 CFAP74Q9C0B2 1584 aa20.01■□□□□ 0.79
SGCE-201ENST00000265735 AKNAQ7Z591 1439 aa19.98■□□□□ 0.79
SGCE-201ENST00000265735 CDC42BPBQ9Y5S2 1711 aa19.96■□□□□ 0.79
SGCE-201ENST00000265735 TIAM1Q13009 1591 aa19.94■□□□□ 0.78
SGCE-201ENST00000265735 MTUS2Q5JR59 1369 aa19.94■□□□□ 0.78
SGCE-201ENST00000265735 EHBP1L1Q8N3D4 1523 aa19.93■□□□□ 0.78
SGCE-201ENST00000265735 PREX2Q70Z35 1606 aa19.93■□□□□ 0.78
SGCE-201ENST00000265735 FRMPD1Q5SYB0 1578 aa19.93■□□□□ 0.78
SGCE-201ENST00000265735 CDC42BPAQ5VT25 1732 aa19.93■□□□□ 0.78
SGCE-201ENST00000265735 EFCAB2Q5VUJ9 269 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms