RNA–Protein interactions for RNA: ENST00000265038.9

ERCC8-201, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC8, Length 2,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-201ENST00000265038 JPH4Q96JJ6 628 aa14.2□□□□□ -0.14
ERCC8-201ENST00000265038 RAPGEF2Q9Y4G8 1499 aa14.17□□□□□ -0.14
ERCC8-201ENST00000265038 KIAA0586Q9BVV6 1533 aa14.17□□□□□ -0.14
ERCC8-201ENST00000265038 ERCC6L2Q5T890 1561 aa14.15□□□□□ -0.14
ERCC8-201ENST00000265038 CSRNP3Q8WYN3 585 aa14.15□□□□□ -0.14
ERCC8-201ENST00000265038 PRG4Q92954 1404 aaPredicted RBP14.15□□□□□ -0.14
ERCC8-201ENST00000265038 SHROOM2Q13796 1616 aa14.14□□□□□ -0.15
ERCC8-201ENST00000265038 PRXQ9BXM0 1461 aa14.13□□□□□ -0.15
ERCC8-201ENST00000265038 FAM9AQ8IZU1 332 aaPredicted RBP14.1□□□□□ -0.15
ERCC8-201ENST00000265038 EEA1Q15075 1411 aa14.1□□□□□ -0.15
ERCC8-201ENST00000265038 IQGAP2Q13576 1575 aa14.03□□□□□ -0.16
ERCC8-201ENST00000265038 CARMIL2Q6F5E8 1435 aa14□□□□□ -0.17
ERCC8-201ENST00000265038 DISP1Q96F81 1524 aa13.99□□□□□ -0.17
ERCC8-201ENST00000265038 UGGT2Q9NYU1 1516 aa13.99□□□□□ -0.17
ERCC8-201ENST00000265038 TNIKQ9UKE5 1360 aa13.99□□□□□ -0.17
ERCC8-201ENST00000265038 PTPRGP23470 1445 aa13.98□□□□□ -0.17
ERCC8-201ENST00000265038 TTBK1Q5TCY1 1321 aaPredicted RBP13.97□□□□□ -0.17
ERCC8-201ENST00000265038 TRHP20396 242 aaPredicted RBP13.93□□□□□ -0.18
ERCC8-201ENST00000265038 EHMT2Q96KQ7 1210 aa13.93□□□□□ -0.18
ERCC8-201ENST00000265038 KIF21BO75037 1637 aa13.91□□□□□ -0.18
ERCC8-201ENST00000265038 KIAA0556O60303 1618 aa13.91□□□□□ -0.18
ERCC8-201ENST00000265038 CTTNBP2Q8WZ74 1663 aa13.9□□□□□ -0.18
ERCC8-201ENST00000265038 GOLGA3Q08378 1498 aa13.9□□□□□ -0.18
ERCC8-201ENST00000265038 NPM1P06748 294 aaKnown RBP eCLIP13.89□□□□□ -0.19
ERCC8-201ENST00000265038 P3H3Q8IVL6 736 aa13.89□□□□□ -0.19
ERCC8-201ENST00000265038 UBTFP17480 764 aaKnown RBP13.88□□□□□ -0.19
ERCC8-201ENST00000265038 UACAQ9BZF9 1416 aa13.88□□□□□ -0.19
ERCC8-201ENST00000265038 RANGAP1P46060 587 aaPredicted RBP13.88□□□□□ -0.19
ERCC8-201ENST00000265038 ADCY10Q96PN6 1610 aa13.88□□□□□ -0.19
ERCC8-201ENST00000265038 UHRF1BP1LA0JNW5 1464 aa13.85□□□□□ -0.19
ERCC8-201ENST00000265038 ABCC2Q92887 1545 aa13.83□□□□□ -0.2
ERCC8-201ENST00000265038 PLB1Q6P1J6 1458 aa13.82□□□□□ -0.2
ERCC8-201ENST00000265038 SAMD9Q5K651 1589 aa13.8□□□□□ -0.2
ERCC8-201ENST00000265038 MAPKBP1O60336 1514 aa13.8□□□□□ -0.2
ERCC8-201ENST00000265038 KDM5BQ9UGL1 1544 aa13.79□□□□□ -0.2
ERCC8-201ENST00000265038 FAM69CQ0P6D2 419 aa13.78□□□□□ -0.2
ERCC8-201ENST00000265038 FHOD3Q2V2M9 1422 aa13.78□□□□□ -0.2
ERCC8-201ENST00000265038 ABCA8O94911 1581 aa13.78□□□□□ -0.2
ERCC8-201ENST00000265038 ABCC10Q5T3U5 1492 aa13.78□□□□□ -0.2
ERCC8-201ENST00000265038 ASXL2Q76L83 1435 aa13.76□□□□□ -0.21
ERCC8-201ENST00000265038 EFCAB5A4FU69 1503 aa13.74□□□□□ -0.21
ERCC8-201ENST00000265038 ARID3CA6NKF2 412 aa13.73□□□□□ -0.21
ERCC8-201ENST00000265038 ARHGAP35Q9NRY4 1499 aa13.73□□□□□ -0.21
ERCC8-201ENST00000265038 ATP10BO94823 1461 aa13.7□□□□□ -0.22
ERCC8-201ENST00000265038 DIP2BQ9P265 1576 aa13.7□□□□□ -0.22
ERCC8-201ENST00000265038 ZCCHC11Q5TAX3 1644 aaKnown RBP13.69□□□□□ -0.22
ERCC8-201ENST00000265038 NUP153P49790 1475 aaKnown RBP13.68□□□□□ -0.22
ERCC8-201ENST00000265038 LOC105371045A0A1W2PR82 267 aa13.68□□□□□ -0.22
ERCC8-201ENST00000265038 EPRSP07814 1512 aaKnown RBP13.67□□□□□ -0.22
ERCC8-201ENST00000265038 WDR7Q9Y4E6 1490 aa13.67□□□□□ -0.22
ERCC8-201ENST00000265038 RAPGEF6Q8TEU7 1601 aa13.66□□□□□ -0.22
ERCC8-201ENST00000265038 KIF13AQ9H1H9 1805 aa13.66□□□□□ -0.22
ERCC8-201ENST00000265038 KCNH8Q96L42 1107 aa13.66□□□□□ -0.22
ERCC8-201ENST00000265038 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.65□□□□□ -0.22
ERCC8-201ENST00000265038 HNRNPUL2Q1KMD3 747 aaKnown RBP13.65□□□□□ -0.22
ERCC8-201ENST00000265038 FMN1Q68DA7 1419 aa13.65□□□□□ -0.22
ERCC8-201ENST00000265038 GLI2P10070 1586 aa13.64□□□□□ -0.23
ERCC8-201ENST00000265038 CLIP1P30622 1438 aa13.64□□□□□ -0.23
ERCC8-201ENST00000265038 ATP1B4Q9UN42 357 aaPredicted RBP13.62□□□□□ -0.23
ERCC8-201ENST00000265038 PLEKHD1A6NEE1 506 aa13.59□□□□□ -0.23
ERCC8-201ENST00000265038 CEP162Q5TB80 1403 aa13.58□□□□□ -0.24
ERCC8-201ENST00000265038 CDK13Q14004 1512 aaKnown RBP13.57□□□□□ -0.24
ERCC8-201ENST00000265038 CD109Q6YHK3 1445 aa13.57□□□□□ -0.24
ERCC8-201ENST00000265038 CASKIN1Q8WXD9 1431 aa13.55□□□□□ -0.24
ERCC8-201ENST00000265038 MAP3K4Q9Y6R4 1608 aa13.55□□□□□ -0.24
ERCC8-201ENST00000265038 HECW1Q76N89 1606 aa13.53□□□□□ -0.24
ERCC8-201ENST00000265038 PPRC1Q5VV67 1664 aaKnown RBP13.53□□□□□ -0.24
ERCC8-201ENST00000265038 MAGI3Q5TCQ9 1506 aa13.52□□□□□ -0.24
ERCC8-201ENST00000265038 CDK11AQ9UQ88 783 aaPredicted RBP13.52□□□□□ -0.25
ERCC8-201ENST00000265038 TSPOAP1O95153 1857 aa13.51□□□□□ -0.25
ERCC8-201ENST00000265038 TEX14Q8IWB6 1497 aa13.51□□□□□ -0.25
ERCC8-201ENST00000265038 COL17A1Q9UMD9 1497 aaPredicted RBP13.5□□□□□ -0.25
ERCC8-201ENST00000265038 PCF11O94913 1555 aaKnown RBP13.5□□□□□ -0.25
ERCC8-201ENST00000265038 FYCO1Q9BQS8 1478 aa13.49□□□□□ -0.25
ERCC8-201ENST00000265038 ABCA9Q8IUA7 1624 aa13.48□□□□□ -0.25
ERCC8-201ENST00000265038 CFAP43Q8NDM7 1665 aa13.48□□□□□ -0.25
ERCC8-201ENST00000265038 KDM6BO15054 1643 aa13.47□□□□□ -0.25
ERCC8-201ENST00000265038 TROQ12816 1431 aaPredicted RBP13.47□□□□□ -0.25
ERCC8-201ENST00000265038 CCDC18Q5T9S5 1454 aa13.46□□□□□ -0.25
ERCC8-201ENST00000265038 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.46□□□□□ -0.25
ERCC8-201ENST00000265038 LRRIQ1Q96JM4 1722 aa13.43□□□□□ -0.26
ERCC8-201ENST00000265038 PHLDB1Q86UU1 1377 aa13.43□□□□□ -0.26
ERCC8-201ENST00000265038 PLCH2O75038 1416 aa13.42□□□□□ -0.26
ERCC8-201ENST00000265038 TTC37Q6PGP7 1564 aa13.42□□□□□ -0.26
ERCC8-201ENST00000265038 NEO1Q92859 1461 aa13.41□□□□□ -0.26
ERCC8-201ENST00000265038 VPS8Q8N3P4 1428 aa13.41□□□□□ -0.26
ERCC8-201ENST00000265038 ARAP3Q8WWN8 1544 aa13.4□□□□□ -0.26
ERCC8-201ENST00000265038 RAPGEF3O95398 923 aa13.39□□□□□ -0.27
ERCC8-201ENST00000265038 FANCAO15360 1455 aa13.39□□□□□ -0.27
ERCC8-201ENST00000265038 KIF14Q15058 1648 aa13.39□□□□□ -0.27
ERCC8-201ENST00000265038 AKNAQ7Z591 1439 aa13.39□□□□□ -0.27
ERCC8-201ENST00000265038 EFCAB2Q5VUJ9 269 aa13.37□□□□□ -0.27
ERCC8-201ENST00000265038 MTUS2Q5JR59 1369 aa13.36□□□□□ -0.27
ERCC8-201ENST00000265038 DENND4BO75064 1496 aaPredicted RBP13.33□□□□□ -0.27
ERCC8-201ENST00000265038 SCAPERQ9BY12 1400 aa13.33□□□□□ -0.28
ERCC8-201ENST00000265038 ADGRL1O94910 1474 aa13.31□□□□□ -0.28
ERCC8-201ENST00000265038 KANK4Q5T7N3 995 aaPredicted RBP13.31□□□□□ -0.28
ERCC8-201ENST00000265038 ARHGAP5Q13017 1502 aa13.31□□□□□ -0.28
ERCC8-201ENST00000265038 GPATCH8Q9UKJ3 1502 aaKnown RBP13.31□□□□□ -0.28
ERCC8-201ENST00000265038 CCNB3Q8WWL7 1395 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms