RNA–Protein interactions for RNA: ENST00000264254.10

PDCL3-201, Transcript of phosducin like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCL3, Length 1,337 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCL3-201ENST00000264254 KIF21BO75037 1637 aa28.15■■■□□ 2.1
PDCL3-201ENST00000264254 JPH4Q96JJ6 628 aa28.11■■■□□ 2.09
PDCL3-201ENST00000264254 GOLGA3Q08378 1498 aa28.09■■■□□ 2.09
PDCL3-201ENST00000264254 UBTFP17480 764 aaKnown RBP28.02■■■□□ 2.08
PDCL3-201ENST00000264254 IQGAP2Q13576 1575 aa28.02■■■□□ 2.08
PDCL3-201ENST00000264254 SHROOM2Q13796 1616 aa27.98■■■□□ 2.07
PDCL3-201ENST00000264254 ARHGEF11O15085 1522 aa27.97■■■□□ 2.07
PDCL3-201ENST00000264254 PRG4Q92954 1404 aaPredicted RBP27.96■■■□□ 2.07
PDCL3-201ENST00000264254 CARMIL2Q6F5E8 1435 aa27.93■■■□□ 2.06
PDCL3-201ENST00000264254 EHMT2Q96KQ7 1210 aa27.92■■■□□ 2.06
PDCL3-201ENST00000264254 UGGT2Q9NYU1 1516 aa27.91■■■□□ 2.06
PDCL3-201ENST00000264254 CTTNBP2Q8WZ74 1663 aa27.91■■■□□ 2.06
PDCL3-201ENST00000264254 RIMBP3CA6NJZ7 1639 aa27.85■■■□□ 2.05
PDCL3-201ENST00000264254 RIMBP3BA6NNM3 1639 aa27.85■■■□□ 2.05
PDCL3-201ENST00000264254 RIMBP3Q9UFD9 1639 aa27.85■■■□□ 2.05
PDCL3-201ENST00000264254 TNIKQ9UKE5 1360 aa27.84■■■□□ 2.05
PDCL3-201ENST00000264254 DISP1Q96F81 1524 aa27.79■■■□□ 2.04
PDCL3-201ENST00000264254 ERCC6L2Q5T890 1561 aa27.77■■■□□ 2.04
PDCL3-201ENST00000264254 ARAP1Q96P48 1450 aa27.76■■■□□ 2.03
PDCL3-201ENST00000264254 CYB5RLQ6IPT4 315 aa27.75■■■□□ 2.03
PDCL3-201ENST00000264254 PTPRGP23470 1445 aa27.73■■■□□ 2.03
PDCL3-201ENST00000264254 KIAA0556O60303 1618 aa27.72■■■□□ 2.03
PDCL3-201ENST00000264254 LOC105371045A0A1W2PR82 267 aa27.71■■■□□ 2.03
PDCL3-201ENST00000264254 RANGAP1P46060 587 aaPredicted RBP27.71■■■□□ 2.03
PDCL3-201ENST00000264254 EFCAB5A4FU69 1503 aa27.71■■■□□ 2.03
PDCL3-201ENST00000264254 SAMD9Q5K651 1589 aa27.66■■■□□ 2.02
PDCL3-201ENST00000264254 P3H3Q8IVL6 736 aa27.64■■■□□ 2.01
PDCL3-201ENST00000264254 CLIP1P30622 1438 aa27.59■■■□□ 2.01
PDCL3-201ENST00000264254 TTBK1Q5TCY1 1321 aaPredicted RBP27.58■■■□□ 2.01
PDCL3-201ENST00000264254 ARHGAP35Q9NRY4 1499 aa27.57■■■□□ 2
PDCL3-201ENST00000264254 FHOD3Q2V2M9 1422 aa27.55■■■□□ 2
PDCL3-201ENST00000264254 CEP162Q5TB80 1403 aa27.54■■■□□ 2
PDCL3-201ENST00000264254 UACAQ9BZF9 1416 aa27.54■■■□□ 2
PDCL3-201ENST00000264254 FMN1Q68DA7 1419 aa27.51■■□□□ 1.99
PDCL3-201ENST00000264254 UHRF1BP1LA0JNW5 1464 aa27.5■■□□□ 1.99
PDCL3-201ENST00000264254 NPM1P06748 294 aaKnown RBP eCLIP27.49■■□□□ 1.99
PDCL3-201ENST00000264254 ABCC2Q92887 1545 aa27.43■■□□□ 1.98
PDCL3-201ENST00000264254 PLB1Q6P1J6 1458 aa27.43■■□□□ 1.98
PDCL3-201ENST00000264254 ABCA8O94911 1581 aa27.4■■□□□ 1.98
PDCL3-201ENST00000264254 ADCY10Q96PN6 1610 aa27.38■■□□□ 1.97
PDCL3-201ENST00000264254 KDM5BQ9UGL1 1544 aa27.33■■□□□ 1.97
PDCL3-201ENST00000264254 RAPGEF6Q8TEU7 1601 aa27.32■■□□□ 1.96
PDCL3-201ENST00000264254 CASKIN1Q8WXD9 1431 aa27.28■■□□□ 1.96
PDCL3-201ENST00000264254 ATP1B4Q9UN42 357 aaPredicted RBP27.26■■□□□ 1.95
PDCL3-201ENST00000264254 NUP153P49790 1475 aaKnown RBP27.26■■□□□ 1.95
PDCL3-201ENST00000264254 FYCO1Q9BQS8 1478 aa27.23■■□□□ 1.95
PDCL3-201ENST00000264254 MAPKBP1O60336 1514 aa27.22■■□□□ 1.95
PDCL3-201ENST00000264254 ATP10BO94823 1461 aa27.22■■□□□ 1.95
PDCL3-201ENST00000264254 HECW1Q76N89 1606 aa27.22■■□□□ 1.95
PDCL3-201ENST00000264254 VPS8Q8N3P4 1428 aa27.22■■□□□ 1.95
PDCL3-201ENST00000264254 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.21■■□□□ 1.95
PDCL3-201ENST00000264254 HNRNPUL2Q1KMD3 747 aaKnown RBP27.21■■□□□ 1.95
PDCL3-201ENST00000264254 CDK11AQ9UQ88 783 aaPredicted RBP27.18■■□□□ 1.94
PDCL3-201ENST00000264254 ARID3CA6NKF2 412 aa27.17■■□□□ 1.94
PDCL3-201ENST00000264254 ASXL2Q76L83 1435 aa27.16■■□□□ 1.94
PDCL3-201ENST00000264254 CCDC18Q5T9S5 1454 aa27.16■■□□□ 1.94
PDCL3-201ENST00000264254 ZCCHC11Q5TAX3 1644 aaKnown RBP27.16■■□□□ 1.94
PDCL3-201ENST00000264254 EPRSP07814 1512 aaKnown RBP27.15■■□□□ 1.94
PDCL3-201ENST00000264254 PCF11O94913 1555 aaKnown RBP27.15■■□□□ 1.94
PDCL3-201ENST00000264254 PLEKHD1A6NEE1 506 aa27.15■■□□□ 1.94
PDCL3-201ENST00000264254 WDR7Q9Y4E6 1490 aa27.11■■□□□ 1.93
PDCL3-201ENST00000264254 TRHP20396 242 aaPredicted RBP27.08■■□□□ 1.93
PDCL3-201ENST00000264254 ABCC10Q5T3U5 1492 aa27.07■■□□□ 1.92
PDCL3-201ENST00000264254 CDK13Q14004 1512 aaKnown RBP27.06■■□□□ 1.92
PDCL3-201ENST00000264254 APLP2Q06481 763 aa27.02■■□□□ 1.92
PDCL3-201ENST00000264254 FAM69CQ0P6D2 419 aa27.02■■□□□ 1.92
PDCL3-201ENST00000264254 KCNH8Q96L42 1107 aa27■■□□□ 1.91
PDCL3-201ENST00000264254 TROQ12816 1431 aaPredicted RBP26.97■■□□□ 1.91
PDCL3-201ENST00000264254 MAP3K1Q13233 1512 aa26.96■■□□□ 1.91
PDCL3-201ENST00000264254 GLI2P10070 1586 aa26.94■■□□□ 1.9
PDCL3-201ENST00000264254 DIP2BQ9P265 1576 aa26.94■■□□□ 1.9
PDCL3-201ENST00000264254 MTUS2Q5JR59 1369 aa26.92■■□□□ 1.9
PDCL3-201ENST00000264254 TIAM1Q13009 1591 aa26.87■■□□□ 1.89
PDCL3-201ENST00000264254 LRRIQ1Q96JM4 1722 aa26.87■■□□□ 1.89
PDCL3-201ENST00000264254 CD109Q6YHK3 1445 aa26.84■■□□□ 1.89
PDCL3-201ENST00000264254 EHBP1L1Q8N3D4 1523 aa26.82■■□□□ 1.88
PDCL3-201ENST00000264254 KIF14Q15058 1648 aa26.81■■□□□ 1.88
PDCL3-201ENST00000264254 LRRC9Q6ZRR7 1453 aa26.81■■□□□ 1.88
PDCL3-201ENST00000264254 CFAP43Q8NDM7 1665 aa26.81■■□□□ 1.88
PDCL3-201ENST00000264254 MAGI3Q5TCQ9 1506 aa26.81■■□□□ 1.88
PDCL3-201ENST00000264254 ABCA9Q8IUA7 1624 aa26.8■■□□□ 1.88
PDCL3-201ENST00000264254 KIF13AQ9H1H9 1805 aa26.77■■□□□ 1.88
PDCL3-201ENST00000264254 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.77■■□□□ 1.88
PDCL3-201ENST00000264254 TEX14Q8IWB6 1497 aa26.76■■□□□ 1.87
PDCL3-201ENST00000264254 MAP3K4Q9Y6R4 1608 aa26.76■■□□□ 1.87
PDCL3-201ENST00000264254 KANK4Q5T7N3 995 aaPredicted RBP26.75■■□□□ 1.87
PDCL3-201ENST00000264254 PLCH2O75038 1416 aa26.72■■□□□ 1.87
PDCL3-201ENST00000264254 PHLDB1Q86UU1 1377 aa26.71■■□□□ 1.87
PDCL3-201ENST00000264254 CCNB3Q8WWL7 1395 aa26.7■■□□□ 1.86
PDCL3-201ENST00000264254 TTC37Q6PGP7 1564 aa26.67■■□□□ 1.86
PDCL3-201ENST00000264254 ARAP3Q8WWN8 1544 aa26.67■■□□□ 1.86
PDCL3-201ENST00000264254 EFCAB2Q5VUJ9 269 aa26.66■■□□□ 1.86
PDCL3-201ENST00000264254 NCOA2Q15596 1464 aa26.66■■□□□ 1.86
PDCL3-201ENST00000264254 NEO1Q92859 1461 aa26.64■■□□□ 1.86
PDCL3-201ENST00000264254 SUPT6HQ7KZ85 1726 aaKnown RBP26.64■■□□□ 1.85
PDCL3-201ENST00000264254 GPATCH8Q9UKJ3 1502 aaKnown RBP26.62■■□□□ 1.85
PDCL3-201ENST00000264254 FANCAO15360 1455 aa26.62■■□□□ 1.85
PDCL3-201ENST00000264254 CFDP1Q9UEE9 299 aaPredicted RBP26.61■■□□□ 1.85
PDCL3-201ENST00000264254 ARHGAP5Q13017 1502 aa26.57■■□□□ 1.84
PDCL3-201ENST00000264254 CFAP74Q9C0B2 1584 aa26.56■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms