RNA–Protein interactions for RNA: ENST00000264254.10

PDCL3-201, Transcript of phosducin like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCL3, Length 1,337 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCL3-201ENST00000264254 NISCHQ9Y2I1 1504 aa40.79■■■■■ 4.12
PDCL3-201ENST00000264254 CCDC180Q9P1Z9 1646 aa36.01■■■■□ 3.36
PDCL3-201ENST00000264254 ABCC9O60706 1549 aa34.86■■■■□ 3.17
PDCL3-201ENST00000264254 ZCCHC6Q5VYS8 1495 aaKnown RBP34.05■■■■□ 3.04
PDCL3-201ENST00000264254 DCAF8L2P0C7V8 631 aa33.96■■■■□ 3.03
PDCL3-201ENST00000264254 NACADO15069 1562 aa33.86■■■■□ 3.01
PDCL3-201ENST00000264254 MYO15BQ96JP2 1530 aa33.85■■■■□ 3.01
PDCL3-201ENST00000264254 DCAF1Q9Y4B6 1507 aa33.83■■■■□ 3.01
PDCL3-201ENST00000264254 RB1CC1Q8TDY2 1594 aa33.78■■■■□ 3
PDCL3-201ENST00000264254 SCRIBQ14160 1630 aa32.85■■■□□ 2.85
PDCL3-201ENST00000264254 UNC13AQ9UPW8 1703 aa32.73■■■□□ 2.83
PDCL3-201ENST00000264254 PABPN1Q86U42 306 aaKnown RBP eCLIP32.68■■■□□ 2.82
PDCL3-201ENST00000264254 BICRAQ9NZM4 1560 aa32.62■■■□□ 2.81
PDCL3-201ENST00000264254 SHROOM4Q9ULL8 1493 aa32.54■■■□□ 2.8
PDCL3-201ENST00000264254 EIF4G1Q04637 1599 aaKnown RBP31.79■■■□□ 2.68
PDCL3-201ENST00000264254 CECR2Q9BXF3 1484 aa31.66■■■□□ 2.66
PDCL3-201ENST00000264254 BAZ1AQ9NRL2 1556 aaPredicted RBP31.61■■■□□ 2.65
PDCL3-201ENST00000264254 DNAJC5BQ9UF47 199 aa31.61■■■□□ 2.65
PDCL3-201ENST00000264254 CC2D2AQ9P2K1 1620 aa31.52■■■□□ 2.64
PDCL3-201ENST00000264254 SMARCA4P51532 1647 aa31.49■■■□□ 2.63
PDCL3-201ENST00000264254 MROH2BQ7Z745 1585 aa31.38■■■□□ 2.61
PDCL3-201ENST00000264254 SMARCA2P51531 1590 aa31.31■■■□□ 2.6
PDCL3-201ENST00000264254 ATAD2BQ9ULI0 1458 aa31.3■■■□□ 2.6
PDCL3-201ENST00000264254 NCAPD3P42695 1498 aa31.27■■■□□ 2.6
PDCL3-201ENST00000264254 RSF1Q96T23 1441 aaPredicted RBP31.24■■■□□ 2.59
PDCL3-201ENST00000264254 PEG3Q9GZU2 1588 aa31.24■■■□□ 2.59
PDCL3-201ENST00000264254 HMGXB3Q12766 1538 aa31.1■■■□□ 2.57
PDCL3-201ENST00000264254 BAZ1BQ9UIG0 1483 aaKnown RBP31.08■■■□□ 2.57
PDCL3-201ENST00000264254 WIZO95785 1651 aa30.98■■■□□ 2.55
PDCL3-201ENST00000264254 TOP2AP11388 1531 aaKnown RBP30.8■■■□□ 2.52
PDCL3-201ENST00000264254 SUPT5HO00267 1087 aaKnown RBP30.75■■■□□ 2.51
PDCL3-201ENST00000264254 AEBP2Q6ZN18 517 aaPredicted RBP30.49■■■□□ 2.47
PDCL3-201ENST00000264254 CCDC88BA6NC98 1476 aa30.44■■■□□ 2.46
PDCL3-201ENST00000264254 CADPSQ9ULU8 1353 aa30.39■■■□□ 2.46
PDCL3-201ENST00000264254 LAMC3Q9Y6N6 1575 aa30.33■■■□□ 2.45
PDCL3-201ENST00000264254 CFTRP13569 1480 aa30.27■■■□□ 2.44
PDCL3-201ENST00000264254 NESP48681 1621 aa30.25■■■□□ 2.43
PDCL3-201ENST00000264254 PDS5BQ9NTI5 1447 aa30.21■■■□□ 2.43
PDCL3-201ENST00000264254 ERCC6Q03468 1493 aa30.1■■■□□ 2.41
PDCL3-201ENST00000264254 FANCD2Q9BXW9 1451 aa29.99■■■□□ 2.39
PDCL3-201ENST00000264254 CEP164Q9UPV0 1460 aa29.93■■■□□ 2.38
PDCL3-201ENST00000264254 PRDM2Q13029 1718 aa29.84■■■□□ 2.37
PDCL3-201ENST00000264254 KIF21AQ7Z4S6 1674 aa29.8■■■□□ 2.36
PDCL3-201ENST00000264254 MRC2Q9UBG0 1479 aa29.79■■■□□ 2.36
PDCL3-201ENST00000264254 THOC2Q8NI27 1593 aaKnown RBP29.69■■■□□ 2.34
PDCL3-201ENST00000264254 ABCC8Q09428 1581 aa29.67■■■□□ 2.34
PDCL3-201ENST00000264254 CUX2O14529 1486 aa29.65■■■□□ 2.34
PDCL3-201ENST00000264254 WDR62O43379 1518 aa29.64■■■□□ 2.34
PDCL3-201ENST00000264254 URB2Q14146 1524 aaKnown RBP29.6■■■□□ 2.33
PDCL3-201ENST00000264254 TOPBP1Q92547 1522 aa29.53■■■□□ 2.32
PDCL3-201ENST00000264254 DNMBPQ6XZF7 1577 aa29.52■■■□□ 2.32
PDCL3-201ENST00000264254 WRNQ14191 1432 aaPredicted RBP eCLIP29.47■■■□□ 2.31
PDCL3-201ENST00000264254 CUX1P39880 1505 aa29.42■■■□□ 2.3
PDCL3-201ENST00000264254 IFT140Q96RY7 1462 aa29.31■■■□□ 2.28
PDCL3-201ENST00000264254 POLA1P09884 1462 aaPredicted RBP29.3■■■□□ 2.28
PDCL3-201ENST00000264254 TOP2BQ02880 1626 aa29.29■■■□□ 2.28
PDCL3-201ENST00000264254 FGD5Q6ZNL6 1462 aa29.29■■■□□ 2.28
PDCL3-201ENST00000264254 SOGA1O94964 1423 aa29.26■■■□□ 2.27
PDCL3-201ENST00000264254 SYNJ1O43426 1573 aa29.24■■■□□ 2.27
PDCL3-201ENST00000264254 BIVM-ERCC5R4GMW8 1640 aa29.24■■■□□ 2.27
PDCL3-201ENST00000264254 RAD54L2Q9Y4B4 1467 aa29.14■■■□□ 2.25
PDCL3-201ENST00000264254 TRIM41Q8WV44 630 aa29.12■■■□□ 2.25
PDCL3-201ENST00000264254 TARBP1Q13395 1621 aaKnown RBP29.11■■■□□ 2.25
PDCL3-201ENST00000264254 ABCA10Q8WWZ4 1543 aa29.07■■■□□ 2.24
PDCL3-201ENST00000264254 WDR97A6NE52 1622 aa29.03■■■□□ 2.24
PDCL3-201ENST00000264254 ZNF608Q9ULD9 1512 aaPredicted RBP29.03■■■□□ 2.24
PDCL3-201ENST00000264254 TDRD9Q8NDG6 1382 aaKnown RBP29■■■□□ 2.23
PDCL3-201ENST00000264254 AQRO60306 1485 aaKnown RBP eCLIP28.96■■■□□ 2.23
PDCL3-201ENST00000264254 CHIC1Q5VXU3 224 aa28.95■■■□□ 2.23
PDCL3-201ENST00000264254 EIF4G3O43432 1585 aaKnown RBP28.91■■■□□ 2.22
PDCL3-201ENST00000264254 GAPVD1Q14C86 1478 aa28.9■■■□□ 2.22
PDCL3-201ENST00000264254 KIF27Q86VH2 1401 aa28.87■■■□□ 2.21
PDCL3-201ENST00000264254 GRIN2BQ13224 1484 aa28.86■■■□□ 2.21
PDCL3-201ENST00000264254 ABCA5Q8WWZ7 1642 aa28.82■■■□□ 2.2
PDCL3-201ENST00000264254 MAGI1Q96QZ7 1491 aaPredicted RBP28.75■■■□□ 2.19
PDCL3-201ENST00000264254 ERICH3Q5RHP9 1530 aa28.74■■■□□ 2.19
PDCL3-201ENST00000264254 SNAPC4Q5SXM2 1469 aa28.71■■■□□ 2.19
PDCL3-201ENST00000264254 IGF1RP08069 1367 aa28.67■■■□□ 2.18
PDCL3-201ENST00000264254 PBRM1Q86U86 1689 aa28.64■■■□□ 2.18
PDCL3-201ENST00000264254 CHMP7Q8WUX9 453 aaPredicted RBP28.64■■■□□ 2.17
PDCL3-201ENST00000264254 EEA1Q15075 1411 aa28.64■■■□□ 2.17
PDCL3-201ENST00000264254 SYNJ2O15056 1496 aa28.62■■■□□ 2.17
PDCL3-201ENST00000264254 FHAD1B1AJZ9 1412 aa28.62■■■□□ 2.17
PDCL3-201ENST00000264254 FBLN2P98095 1184 aa28.6■■■□□ 2.17
PDCL3-201ENST00000264254 RUSC2Q8N2Y8 1516 aa28.56■■■□□ 2.16
PDCL3-201ENST00000264254 OSCARQ8IYS5 282 aa28.56■■■□□ 2.16
PDCL3-201ENST00000264254 ADAMTS12P58397 1594 aa28.53■■■□□ 2.16
PDCL3-201ENST00000264254 CARMIL1Q5VZK9 1371 aa28.52■■■□□ 2.16
PDCL3-201ENST00000264254 CSRNP3Q8WYN3 585 aa28.51■■■□□ 2.15
PDCL3-201ENST00000264254 CUL7Q14999 1698 aa28.5■■■□□ 2.15
PDCL3-201ENST00000264254 GRIN2AQ12879 1464 aa28.46■■■□□ 2.15
PDCL3-201ENST00000264254 RAPGEF2Q9Y4G8 1499 aa28.39■■■□□ 2.14
PDCL3-201ENST00000264254 FAM9AQ8IZU1 332 aaPredicted RBP28.39■■■□□ 2.13
PDCL3-201ENST00000264254 PRXQ9BXM0 1461 aa28.37■■■□□ 2.13
PDCL3-201ENST00000264254 CHD1O14646 1710 aa28.37■■■□□ 2.13
PDCL3-201ENST00000264254 NUP160Q12769 1436 aa28.33■■■□□ 2.13
PDCL3-201ENST00000264254 DNAJC5Q9H3Z4 198 aa28.28■■■□□ 2.12
PDCL3-201ENST00000264254 CEP170Q5SW79 1584 aa28.21■■■□□ 2.11
PDCL3-201ENST00000264254 CLASP1Q7Z460 1538 aa28.21■■■□□ 2.11
PDCL3-201ENST00000264254 KIAA0586Q9BVV6 1533 aa28.19■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms