RNA–Protein interactions for RNA: ENST00000263202.14

UFD1-201, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFD1, Length 1,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-201ENST00000263202 CHD1O14646 1710 aa36.2■■■■□ 3.39
UFD1-201ENST00000263202 FBLN2P98095 1184 aa36.19■■■■□ 3.38
UFD1-201ENST00000263202 RANGAP1P46060 587 aaPredicted RBP36.18■■■■□ 3.38
UFD1-201ENST00000263202 CEP170Q5SW79 1584 aa36.14■■■■□ 3.38
UFD1-201ENST00000263202 IQGAP2Q13576 1575 aa36.11■■■■□ 3.37
UFD1-201ENST00000263202 NUP160Q12769 1436 aa36.09■■■■□ 3.37
UFD1-201ENST00000263202 KIAA0586Q9BVV6 1533 aa36.07■■■■□ 3.37
UFD1-201ENST00000263202 ARHGAP35Q9NRY4 1499 aa36.07■■■■□ 3.36
UFD1-201ENST00000263202 ARAP1Q96P48 1450 aa35.99■■■■□ 3.35
UFD1-201ENST00000263202 EFCAB5A4FU69 1503 aa35.99■■■■□ 3.35
UFD1-201ENST00000263202 SAMD9Q5K651 1589 aa35.96■■■■□ 3.35
UFD1-201ENST00000263202 UGGT2Q9NYU1 1516 aa35.92■■■■□ 3.34
UFD1-201ENST00000263202 VPS8Q8N3P4 1428 aa35.88■■■■□ 3.33
UFD1-201ENST00000263202 P3H3Q8IVL6 736 aa35.82■■■■□ 3.32
UFD1-201ENST00000263202 FHOD3Q2V2M9 1422 aa35.81■■■■□ 3.32
UFD1-201ENST00000263202 DISP1Q96F81 1524 aa35.76■■■■□ 3.31
UFD1-201ENST00000263202 CLASP1Q7Z460 1538 aa35.75■■■■□ 3.31
UFD1-201ENST00000263202 KIAA0556O60303 1618 aa35.75■■■■□ 3.31
UFD1-201ENST00000263202 JPH4Q96JJ6 628 aa35.75■■■■□ 3.31
UFD1-201ENST00000263202 SHROOM2Q13796 1616 aa35.71■■■■□ 3.31
UFD1-201ENST00000263202 FMN1Q68DA7 1419 aa35.63■■■■□ 3.29
UFD1-201ENST00000263202 CARMIL2Q6F5E8 1435 aa35.62■■■■□ 3.29
UFD1-201ENST00000263202 PCF11O94913 1555 aaKnown RBP35.59■■■■□ 3.29
UFD1-201ENST00000263202 PRG4Q92954 1404 aaPredicted RBP35.58■■■■□ 3.29
UFD1-201ENST00000263202 OSCARQ8IYS5 282 aa35.55■■■■□ 3.28
UFD1-201ENST00000263202 CASKIN1Q8WXD9 1431 aa35.52■■■■□ 3.28
UFD1-201ENST00000263202 FYCO1Q9BQS8 1478 aa35.51■■■■□ 3.28
UFD1-201ENST00000263202 ERCC6L2Q5T890 1561 aa35.45■■■■□ 3.27
UFD1-201ENST00000263202 APLP2Q06481 763 aa35.43■■■■□ 3.26
UFD1-201ENST00000263202 PPARGC1BQ86YN6 1023 aaKnown RBP35.41■■■■□ 3.26
UFD1-201ENST00000263202 LRRIQ1Q96JM4 1722 aa35.39■■■■□ 3.26
UFD1-201ENST00000263202 TTBK1Q5TCY1 1321 aaPredicted RBP35.38■■■■□ 3.25
UFD1-201ENST00000263202 MAP3K1Q13233 1512 aa35.37■■■■□ 3.25
UFD1-201ENST00000263202 CFAP43Q8NDM7 1665 aa35.36■■■■□ 3.25
UFD1-201ENST00000263202 TIAM1Q13009 1591 aa35.36■■■■□ 3.25
UFD1-201ENST00000263202 ATP1B4Q9UN42 357 aaPredicted RBP35.36■■■■□ 3.25
UFD1-201ENST00000263202 HECW1Q76N89 1606 aa35.36■■■■□ 3.25
UFD1-201ENST00000263202 RAPGEF6Q8TEU7 1601 aa35.36■■■■□ 3.25
UFD1-201ENST00000263202 PTPRGP23470 1445 aa35.3■■■■□ 3.24
UFD1-201ENST00000263202 PLB1Q6P1J6 1458 aa35.29■■■■□ 3.24
UFD1-201ENST00000263202 ABCA8O94911 1581 aa35.27■■■■□ 3.24
UFD1-201ENST00000263202 KANK4Q5T7N3 995 aaPredicted RBP35.22■■■■□ 3.23
UFD1-201ENST00000263202 NUP153P49790 1475 aaKnown RBP35.22■■■■□ 3.23
UFD1-201ENST00000263202 CCDC18Q5T9S5 1454 aa35.22■■■■□ 3.23
UFD1-201ENST00000263202 EPRSP07814 1512 aaKnown RBP35.21■■■■□ 3.23
UFD1-201ENST00000263202 LRRC9Q6ZRR7 1453 aa35.17■■■■□ 3.22
UFD1-201ENST00000263202 CDK13Q14004 1512 aaKnown RBP35.14■■■■□ 3.22
UFD1-201ENST00000263202 UACAQ9BZF9 1416 aa35.11■■■■□ 3.21
UFD1-201ENST00000263202 ARID3CA6NKF2 412 aa35.06■■■■□ 3.2
UFD1-201ENST00000263202 TRIM26Q12899 539 aaPredicted RBP35.06■■■■□ 3.2
UFD1-201ENST00000263202 ABCC2Q92887 1545 aa35.05■■■■□ 3.2
UFD1-201ENST00000263202 MAGI3Q5TCQ9 1506 aa35.03■■■■□ 3.2
UFD1-201ENST00000263202 ARHGEF11O15085 1522 aa35.01■■■■□ 3.2
UFD1-201ENST00000263202 MTUS2Q5JR59 1369 aa35■■■■□ 3.19
UFD1-201ENST00000263202 EHBP1L1Q8N3D4 1523 aa34.99■■■■□ 3.19
UFD1-201ENST00000263202 UHRF1BP1LA0JNW5 1464 aa34.99■■■■□ 3.19
UFD1-201ENST00000263202 ATP10BO94823 1461 aa34.98■■■■□ 3.19
UFD1-201ENST00000263202 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.93■■■■□ 3.18
UFD1-201ENST00000263202 HNRNPUL2Q1KMD3 747 aaKnown RBP34.93■■■■□ 3.18
UFD1-201ENST00000263202 ADCY10Q96PN6 1610 aa34.91■■■■□ 3.18
UFD1-201ENST00000263202 SUPT6HQ7KZ85 1726 aaKnown RBP34.91■■■■□ 3.18
UFD1-201ENST00000263202 RIMBP3CA6NJZ7 1639 aa34.91■■■■□ 3.18
UFD1-201ENST00000263202 RIMBP3BA6NNM3 1639 aa34.91■■■■□ 3.18
UFD1-201ENST00000263202 RIMBP3Q9UFD9 1639 aa34.91■■■■□ 3.18
UFD1-201ENST00000263202 PCGF6Q9BYE7 350 aa34.89■■■■□ 3.18
UFD1-201ENST00000263202 CDK11AQ9UQ88 783 aaPredicted RBP34.88■■■■□ 3.17
UFD1-201ENST00000263202 ZCCHC11Q5TAX3 1644 aaKnown RBP34.85■■■■□ 3.17
UFD1-201ENST00000263202 KDM5BQ9UGL1 1544 aa34.84■■■■□ 3.17
UFD1-201ENST00000263202 TROQ12816 1431 aaPredicted RBP34.82■■■■□ 3.16
UFD1-201ENST00000263202 NCOA2Q15596 1464 aa34.81■■■■□ 3.16
UFD1-201ENST00000263202 PHLDB1Q86UU1 1377 aa34.81■■■■□ 3.16
UFD1-201ENST00000263202 PLEKHD1A6NEE1 506 aa34.76■■■■□ 3.15
UFD1-201ENST00000263202 RRBP1Q9P2E9 1410 aaKnown RBP34.74■■■■□ 3.15
UFD1-201ENST00000263202 KIF14Q15058 1648 aa34.71■■■■□ 3.15
UFD1-201ENST00000263202 MYOM3Q5VTT5 1437 aa34.65■■■■□ 3.14
UFD1-201ENST00000263202 CCNB3Q8WWL7 1395 aa34.63■■■■□ 3.13
UFD1-201ENST00000263202 CYB5RLQ6IPT4 315 aa34.62■■■■□ 3.13
UFD1-201ENST00000263202 FGD6Q6ZV73 1430 aa34.6■■■■□ 3.13
UFD1-201ENST00000263202 ABCC10Q5T3U5 1492 aa34.57■■■■□ 3.12
UFD1-201ENST00000263202 ITSN2Q9NZM3 1697 aa34.54■■■■□ 3.12
UFD1-201ENST00000263202 NPM1P06748 294 aaKnown RBP eCLIP34.53■■■■□ 3.12
UFD1-201ENST00000263202 CDC42BPAQ5VT25 1732 aa34.51■■■■□ 3.12
UFD1-201ENST00000263202 WDR7Q9Y4E6 1490 aa34.51■■■■□ 3.12
UFD1-201ENST00000263202 PTPN23Q9H3S7 1636 aa34.5■■■■□ 3.11
UFD1-201ENST00000263202 MIA2Q96PC5 1412 aa34.49■■■■□ 3.11
UFD1-201ENST00000263202 ASXL2Q76L83 1435 aa34.49■■■■□ 3.11
UFD1-201ENST00000263202 GPATCH8Q9UKJ3 1502 aaKnown RBP34.49■■■■□ 3.11
UFD1-201ENST00000263202 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.48■■■■□ 3.11
UFD1-201ENST00000263202 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.47■■■■□ 3.112e-7■□□□□ 9.2
UFD1-201ENST00000263202 TTC37Q6PGP7 1564 aa34.46■■■■□ 3.11
UFD1-201ENST00000263202 FAM50AQ14320 339 aaKnown RBP34.44■■■■□ 3.1
UFD1-201ENST00000263202 KCNH8Q96L42 1107 aa34.44■■■■□ 3.1
UFD1-201ENST00000263202 TCOF1Q13428 1488 aaKnown RBP34.43■■■■□ 3.1
UFD1-201ENST00000263202 PREX2Q70Z35 1606 aa34.4■■■■□ 3.1
UFD1-201ENST00000263202 MYO5CQ9NQX4 1742 aa34.39■■■■□ 3.1
UFD1-201ENST00000263202 CDC42BPBQ9Y5S2 1711 aa34.39■■■■□ 3.1
UFD1-201ENST00000263202 MAPKBP1O60336 1514 aa34.37■■■■□ 3.09
UFD1-201ENST00000263202 CFDP1Q9UEE9 299 aaPredicted RBP34.34■■■■□ 3.09
UFD1-201ENST00000263202 ABCA9Q8IUA7 1624 aa34.33■■■■□ 3.09
UFD1-201ENST00000263202 ITGAEP38570 1179 aa34.3■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms