RNA–Protein interactions for RNA: ENST00000262643.7

CCNE1-201, Transcript of cyclin E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNE1, Length 2,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-201ENST00000262643 JPH4Q96JJ6 628 aa35.83■■■■□ 3.33
CCNE1-201ENST00000262643 KIAA0586Q9BVV6 1533 aa35.77■■■■□ 3.32
CCNE1-201ENST00000262643 PRG4Q92954 1404 aaPredicted RBP35.77■■■■□ 3.32
CCNE1-201ENST00000262643 RAPGEF2Q9Y4G8 1499 aa35.74■■■■□ 3.31
CCNE1-201ENST00000262643 CHIC1Q5VXU3 224 aa35.63■■■■□ 3.29
CCNE1-201ENST00000262643 IQGAP2Q13576 1575 aa35.57■■■■□ 3.28
CCNE1-201ENST00000262643 PRXQ9BXM0 1461 aa35.56■■■■□ 3.28
CCNE1-201ENST00000262643 CSRNP3Q8WYN3 585 aa35.54■■■■□ 3.28
CCNE1-201ENST00000262643 FAM9AQ8IZU1 332 aaPredicted RBP35.5■■■■□ 3.27
CCNE1-201ENST00000262643 EEA1Q15075 1411 aa35.48■■■■□ 3.27
CCNE1-201ENST00000262643 TRHP20396 242 aaPredicted RBP35.44■■■■□ 3.26
CCNE1-201ENST00000262643 CARMIL2Q6F5E8 1435 aa35.41■■■■□ 3.26
CCNE1-201ENST00000262643 CTTNBP2Q8WZ74 1663 aa35.41■■■■□ 3.26
CCNE1-201ENST00000262643 TTBK1Q5TCY1 1321 aaPredicted RBP35.39■■■■□ 3.26
CCNE1-201ENST00000262643 UGGT2Q9NYU1 1516 aa35.34■■■■□ 3.25
CCNE1-201ENST00000262643 DISP1Q96F81 1524 aa35.33■■■■□ 3.25
CCNE1-201ENST00000262643 PTPRGP23470 1445 aa35.32■■■■□ 3.25
CCNE1-201ENST00000262643 TNIKQ9UKE5 1360 aa35.31■■■■□ 3.24
CCNE1-201ENST00000262643 ADCY10Q96PN6 1610 aa35.24■■■■□ 3.23
CCNE1-201ENST00000262643 KIAA0556O60303 1618 aa35.23■■■■□ 3.23
CCNE1-201ENST00000262643 NPM1P06748 294 aaKnown RBP eCLIP35.19■■■■□ 3.22
CCNE1-201ENST00000262643 KIF21BO75037 1637 aa35.14■■■■□ 3.22
CCNE1-201ENST00000262643 GOLGA3Q08378 1498 aa35.14■■■■□ 3.22
CCNE1-201ENST00000262643 EHMT2Q96KQ7 1210 aa35.12■■■■□ 3.21
CCNE1-201ENST00000262643 UACAQ9BZF9 1416 aa35.06■■■■□ 3.2
CCNE1-201ENST00000262643 RANGAP1P46060 587 aaPredicted RBP35.05■■■■□ 3.2
CCNE1-201ENST00000262643 P3H3Q8IVL6 736 aa35.03■■■■□ 3.2
CCNE1-201ENST00000262643 MAPKBP1O60336 1514 aa35.01■■■■□ 3.19
CCNE1-201ENST00000262643 ABCC2Q92887 1545 aa35■■■■□ 3.19
CCNE1-201ENST00000262643 UHRF1BP1LA0JNW5 1464 aa35■■■■□ 3.19
CCNE1-201ENST00000262643 UBTFP17480 764 aaKnown RBP34.96■■■■□ 3.19
CCNE1-201ENST00000262643 PLB1Q6P1J6 1458 aa34.94■■■■□ 3.18
CCNE1-201ENST00000262643 SAMD9Q5K651 1589 aa34.92■■■■□ 3.18
CCNE1-201ENST00000262643 KIF13AQ9H1H9 1805 aa34.92■■■■□ 3.18
CCNE1-201ENST00000262643 ABCC10Q5T3U5 1492 aa34.89■■■■□ 3.18
CCNE1-201ENST00000262643 FAM69CQ0P6D2 419 aa34.88■■■■□ 3.17
CCNE1-201ENST00000262643 KDM5BQ9UGL1 1544 aa34.85■■■■□ 3.17
CCNE1-201ENST00000262643 ABCA8O94911 1581 aa34.84■■■■□ 3.17
CCNE1-201ENST00000262643 DIP2BQ9P265 1576 aa34.83■■■■□ 3.17
CCNE1-201ENST00000262643 ASXL2Q76L83 1435 aa34.82■■■■□ 3.16
CCNE1-201ENST00000262643 ZCCHC11Q5TAX3 1644 aaKnown RBP34.81■■■■□ 3.16
CCNE1-201ENST00000262643 FHOD3Q2V2M9 1422 aa34.79■■■■□ 3.16
CCNE1-201ENST00000262643 EFCAB5A4FU69 1503 aa34.74■■■■□ 3.15
CCNE1-201ENST00000262643 ARID3CA6NKF2 412 aa34.72■■■■□ 3.15
CCNE1-201ENST00000262643 RAPGEF6Q8TEU7 1601 aa34.65■■■■□ 3.14
CCNE1-201ENST00000262643 TSPOAP1O95153 1857 aa34.62■■■■□ 3.13
CCNE1-201ENST00000262643 WDR7Q9Y4E6 1490 aa34.6■■■■□ 3.13
CCNE1-201ENST00000262643 EPRSP07814 1512 aaKnown RBP34.6■■■■□ 3.13
CCNE1-201ENST00000262643 ATP10BO94823 1461 aa34.58■■■■□ 3.13
CCNE1-201ENST00000262643 ARHGAP35Q9NRY4 1499 aa34.58■■■■□ 3.13
CCNE1-201ENST00000262643 GLI2P10070 1586 aa34.57■■■■□ 3.12
CCNE1-201ENST00000262643 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.53■■■■□ 3.12
CCNE1-201ENST00000262643 HNRNPUL2Q1KMD3 747 aaKnown RBP34.53■■■■□ 3.12
CCNE1-201ENST00000262643 KCNH8Q96L42 1107 aa34.53■■■■□ 3.12
CCNE1-201ENST00000262643 NUP153P49790 1475 aaKnown RBP34.53■■■■□ 3.12
CCNE1-201ENST00000262643 FMN1Q68DA7 1419 aa34.44■■■■□ 3.1
CCNE1-201ENST00000262643 MAP3K4Q9Y6R4 1608 aa34.44■■■■□ 3.1
CCNE1-201ENST00000262643 PPRC1Q5VV67 1664 aaKnown RBP34.41■■■■□ 3.1
CCNE1-201ENST00000262643 ATP1B4Q9UN42 357 aaPredicted RBP34.4■■■■□ 3.1
CCNE1-201ENST00000262643 CLIP1P30622 1438 aa34.34■■■■□ 3.09
CCNE1-201ENST00000262643 KDM6BO15054 1643 aa34.34■■■■□ 3.09
CCNE1-201ENST00000262643 CD109Q6YHK3 1445 aa34.32■■■■□ 3.08
CCNE1-201ENST00000262643 CFAP43Q8NDM7 1665 aa34.31■■■■□ 3.08
CCNE1-201ENST00000262643 CDK13Q14004 1512 aaKnown RBP34.31■■■■□ 3.08
CCNE1-201ENST00000262643 HECW1Q76N89 1606 aa34.3■■■■□ 3.08
CCNE1-201ENST00000262643 PLEKHD1A6NEE1 506 aa34.3■■■■□ 3.08
CCNE1-201ENST00000262643 TEX14Q8IWB6 1497 aa34.29■■■■□ 3.08
CCNE1-201ENST00000262643 LOC105371045A0A1W2PR82 267 aa34.25■■■■□ 3.07
CCNE1-201ENST00000262643 MAGI3Q5TCQ9 1506 aa34.21■■■■□ 3.07
CCNE1-201ENST00000262643 ABCA9Q8IUA7 1624 aa34.21■■■■□ 3.07
CCNE1-201ENST00000262643 PCF11O94913 1555 aaKnown RBP34.18■■■■□ 3.06
CCNE1-201ENST00000262643 CEP162Q5TB80 1403 aa34.16■■■■□ 3.06
CCNE1-201ENST00000262643 CASKIN1Q8WXD9 1431 aa34.15■■■■□ 3.06
CCNE1-201ENST00000262643 COL17A1Q9UMD9 1497 aaPredicted RBP34.14■■■■□ 3.06
CCNE1-201ENST00000262643 LRRIQ1Q96JM4 1722 aa34.14■■■■□ 3.06
CCNE1-201ENST00000262643 CDK11AQ9UQ88 783 aaPredicted RBP34.1■■■■□ 3.05
CCNE1-201ENST00000262643 FYCO1Q9BQS8 1478 aa34.06■■■■□ 3.04
CCNE1-201ENST00000262643 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.06■■■■□ 3.04
CCNE1-201ENST00000262643 TTC37Q6PGP7 1564 aa34.03■■■■□ 3.04
CCNE1-201ENST00000262643 CCDC18Q5T9S5 1454 aa34.03■■■■□ 3.04
CCNE1-201ENST00000262643 TROQ12816 1431 aaPredicted RBP33.98■■■■□ 3.03
CCNE1-201ENST00000262643 KIF14Q15058 1648 aa33.94■■■■□ 3.02
CCNE1-201ENST00000262643 NEO1Q92859 1461 aa33.93■■■■□ 3.02
CCNE1-201ENST00000262643 ARAP3Q8WWN8 1544 aa33.92■■■■□ 3.02
CCNE1-201ENST00000262643 PHLDB1Q86UU1 1377 aa33.92■■■■□ 3.02
CCNE1-201ENST00000262643 FANCAO15360 1455 aa33.89■■■■□ 3.02
CCNE1-201ENST00000262643 PLCH2O75038 1416 aa33.85■■■■□ 3.01
CCNE1-201ENST00000262643 RAPGEF3O95398 923 aa33.84■■■■□ 3.01
CCNE1-201ENST00000262643 MYO5CQ9NQX4 1742 aa33.83■■■■□ 3.01
CCNE1-201ENST00000262643 AKNAQ7Z591 1439 aa33.83■■■■□ 3.01
CCNE1-201ENST00000262643 CFAP74Q9C0B2 1584 aa33.82■■■■□ 3.01
CCNE1-201ENST00000262643 EFCAB2Q5VUJ9 269 aa33.74■■■□□ 2.99
CCNE1-201ENST00000262643 AEBP2Q6ZN18 517 aaPredicted RBP33.74■■■□□ 2.99
CCNE1-201ENST00000262643 VPS8Q8N3P4 1428 aa33.73■■■□□ 2.99
CCNE1-201ENST00000262643 DENND4BO75064 1496 aaPredicted RBP33.73■■■□□ 2.99
CCNE1-201ENST00000262643 MTUS2Q5JR59 1369 aa33.72■■■□□ 2.99
CCNE1-201ENST00000262643 ARHGAP5Q13017 1502 aa33.72■■■□□ 2.99
CCNE1-201ENST00000262643 FRMPD1Q5SYB0 1578 aa33.72■■■□□ 2.99
CCNE1-201ENST00000262643 ADGRL1O94910 1474 aa33.71■■■□□ 2.99
CCNE1-201ENST00000262643 RICTORQ6R327 1708 aa33.67■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms