RNA–Protein interactions for RNA: ENST00000259216.4

CFC1-201, Transcript of cripto, FRL-1, cryptic family 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFC1, Length 1,046 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFC1-201ENST00000259216 CARMIL1Q5VZK9 1371 aa34.91■■■■□ 3.18
CFC1-201ENST00000259216 JPH4Q96JJ6 628 aa34.91■■■■□ 3.18
CFC1-201ENST00000259216 KIAA0586Q9BVV6 1533 aa34.88■■■■□ 3.17
CFC1-201ENST00000259216 TRHP20396 242 aaPredicted RBP34.72■■■■□ 3.15
CFC1-201ENST00000259216 RAPGEF2Q9Y4G8 1499 aa34.65■■■■□ 3.14
CFC1-201ENST00000259216 IQGAP2Q13576 1575 aa34.6■■■■□ 3.13
CFC1-201ENST00000259216 ADCY10Q96PN6 1610 aa34.51■■■■□ 3.11
CFC1-201ENST00000259216 PRXQ9BXM0 1461 aa34.51■■■■□ 3.11
CFC1-201ENST00000259216 DISP1Q96F81 1524 aa34.46■■■■□ 3.11
CFC1-201ENST00000259216 UGGT2Q9NYU1 1516 aa34.45■■■■□ 3.11
CFC1-201ENST00000259216 CARMIL2Q6F5E8 1435 aa34.43■■■■□ 3.1
CFC1-201ENST00000259216 PTPRGP23470 1445 aa34.41■■■■□ 3.1
CFC1-201ENST00000259216 TNIKQ9UKE5 1360 aa34.4■■■■□ 3.1
CFC1-201ENST00000259216 MAPKBP1O60336 1514 aa34.36■■■■□ 3.09
CFC1-201ENST00000259216 CTTNBP2Q8WZ74 1663 aa34.34■■■■□ 3.09
CFC1-201ENST00000259216 KIF13AQ9H1H9 1805 aa34.33■■■■□ 3.09
CFC1-201ENST00000259216 KIAA0556O60303 1618 aa34.3■■■■□ 3.08
CFC1-201ENST00000259216 ABCC10Q5T3U5 1492 aa34.26■■■■□ 3.07
CFC1-201ENST00000259216 CSRNP3Q8WYN3 585 aa34.24■■■■□ 3.07
CFC1-201ENST00000259216 UHRF1BP1LA0JNW5 1464 aa34.24■■■■□ 3.07
CFC1-201ENST00000259216 NPM1P06748 294 aaKnown RBP eCLIP34.23■■■■□ 3.07
CFC1-201ENST00000259216 ABCC2Q92887 1545 aa34.22■■■■□ 3.07
CFC1-201ENST00000259216 EEA1Q15075 1411 aa34.21■■■■□ 3.07
CFC1-201ENST00000259216 DIP2BQ9P265 1576 aa34.2■■■■□ 3.07
CFC1-201ENST00000259216 TTBK1Q5TCY1 1321 aaPredicted RBP34.2■■■■□ 3.07
CFC1-201ENST00000259216 UACAQ9BZF9 1416 aa34.19■■■■□ 3.06
CFC1-201ENST00000259216 GOLGA3Q08378 1498 aa34.11■■■■□ 3.05
CFC1-201ENST00000259216 KDM5BQ9UGL1 1544 aa34.09■■■■□ 3.05
CFC1-201ENST00000259216 FAM69CQ0P6D2 419 aa34.09■■■■□ 3.05
CFC1-201ENST00000259216 CHIC1Q5VXU3 224 aa34.09■■■■□ 3.05
CFC1-201ENST00000259216 ASXL2Q76L83 1435 aa34.04■■■■□ 3.04
CFC1-201ENST00000259216 PLB1Q6P1J6 1458 aa34.02■■■■□ 3.04
CFC1-201ENST00000259216 ABCA8O94911 1581 aa34■■■■□ 3.03
CFC1-201ENST00000259216 ZCCHC11Q5TAX3 1644 aaKnown RBP33.97■■■■□ 3.03
CFC1-201ENST00000259216 SAMD9Q5K651 1589 aa33.96■■■■□ 3.03
CFC1-201ENST00000259216 KIF21BO75037 1637 aa33.96■■■■□ 3.03
CFC1-201ENST00000259216 FAM9AQ8IZU1 332 aaPredicted RBP33.95■■■■□ 3.03
CFC1-201ENST00000259216 GLI2P10070 1586 aa33.93■■■■□ 3.02
CFC1-201ENST00000259216 EPRSP07814 1512 aaKnown RBP33.85■■■■□ 3.01
CFC1-201ENST00000259216 PPRC1Q5VV67 1664 aaKnown RBP33.81■■■■□ 3
CFC1-201ENST00000259216 P3H3Q8IVL6 736 aa33.81■■■■□ 3
CFC1-201ENST00000259216 TSPOAP1O95153 1857 aa33.81■■■■□ 3
CFC1-201ENST00000259216 WDR7Q9Y4E6 1490 aa33.79■■■■□ 3
CFC1-201ENST00000259216 MAP3K4Q9Y6R4 1608 aa33.75■■■□□ 2.99
CFC1-201ENST00000259216 ATP10BO94823 1461 aa33.69■■■□□ 2.98
CFC1-201ENST00000259216 KDM6BO15054 1643 aa33.69■■■□□ 2.98
CFC1-201ENST00000259216 FHOD3Q2V2M9 1422 aa33.68■■■□□ 2.98
CFC1-201ENST00000259216 EFCAB5A4FU69 1503 aa33.66■■■□□ 2.98
CFC1-201ENST00000259216 RAPGEF6Q8TEU7 1601 aa33.65■■■□□ 2.98
CFC1-201ENST00000259216 RANGAP1P46060 587 aaPredicted RBP33.6■■■□□ 2.97
CFC1-201ENST00000259216 NUP153P49790 1475 aaKnown RBP33.6■■■□□ 2.97
CFC1-201ENST00000259216 COL17A1Q9UMD9 1497 aaPredicted RBP33.56■■■□□ 2.96
CFC1-201ENST00000259216 ARID3CA6NKF2 412 aa33.55■■■□□ 2.96
CFC1-201ENST00000259216 CFAP43Q8NDM7 1665 aa33.53■■■□□ 2.96
CFC1-201ENST00000259216 TEX14Q8IWB6 1497 aa33.53■■■□□ 2.96
CFC1-201ENST00000259216 UBTFP17480 764 aaKnown RBP33.51■■■□□ 2.95
CFC1-201ENST00000259216 EHMT2Q96KQ7 1210 aa33.51■■■□□ 2.95
CFC1-201ENST00000259216 MAGI3Q5TCQ9 1506 aa33.51■■■□□ 2.95
CFC1-201ENST00000259216 KCNH8Q96L42 1107 aa33.49■■■□□ 2.95
CFC1-201ENST00000259216 CD109Q6YHK3 1445 aa33.48■■■□□ 2.95
CFC1-201ENST00000259216 ARHGAP35Q9NRY4 1499 aa33.48■■■□□ 2.95
CFC1-201ENST00000259216 ABCA9Q8IUA7 1624 aa33.41■■■□□ 2.94
CFC1-201ENST00000259216 FMN1Q68DA7 1419 aa33.31■■■□□ 2.92
CFC1-201ENST00000259216 CDK13Q14004 1512 aaKnown RBP33.28■■■□□ 2.92
CFC1-201ENST00000259216 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.27■■■□□ 2.92
CFC1-201ENST00000259216 HNRNPUL2Q1KMD3 747 aaKnown RBP33.27■■■□□ 2.92
CFC1-201ENST00000259216 ARAP3Q8WWN8 1544 aa33.24■■■□□ 2.91
CFC1-201ENST00000259216 AEBP2Q6ZN18 517 aaPredicted RBP33.24■■■□□ 2.91
CFC1-201ENST00000259216 HECW1Q76N89 1606 aa33.21■■■□□ 2.91
CFC1-201ENST00000259216 PLEKHD1A6NEE1 506 aa33.21■■■□□ 2.91
CFC1-201ENST00000259216 KDM4FA0A1W2PPD8 638 aa33.2■■■□□ 2.91
CFC1-201ENST00000259216 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.18■■■□□ 2.9
CFC1-201ENST00000259216 NEO1Q92859 1461 aa33.17■■■□□ 2.9
CFC1-201ENST00000259216 PHLDB1Q86UU1 1377 aa33.16■■■□□ 2.9
CFC1-201ENST00000259216 TTC37Q6PGP7 1564 aa33.13■■■□□ 2.89
CFC1-201ENST00000259216 LRRIQ1Q96JM4 1722 aa33.12■■■□□ 2.89
CFC1-201ENST00000259216 PCF11O94913 1555 aaKnown RBP33.07■■■□□ 2.88
CFC1-201ENST00000259216 CASKIN1Q8WXD9 1431 aa33.06■■■□□ 2.88
CFC1-201ENST00000259216 FRMPD1Q5SYB0 1578 aa33.05■■■□□ 2.88
CFC1-201ENST00000259216 CLIP1P30622 1438 aa33.05■■■□□ 2.88
CFC1-201ENST00000259216 ADGRL1O94910 1474 aa33.04■■■□□ 2.88
CFC1-201ENST00000259216 ATP1B4Q9UN42 357 aaPredicted RBP33.02■■■□□ 2.88
CFC1-201ENST00000259216 FANCAO15360 1455 aa32.99■■■□□ 2.87
CFC1-201ENST00000259216 TROQ12816 1431 aaPredicted RBP32.99■■■□□ 2.87
CFC1-201ENST00000259216 KIF14Q15058 1648 aa32.99■■■□□ 2.87
CFC1-201ENST00000259216 RAPGEF3O95398 923 aa32.98■■■□□ 2.87
CFC1-201ENST00000259216 AKNAQ7Z591 1439 aa32.96■■■□□ 2.87
CFC1-201ENST00000259216 PLCH2O75038 1416 aa32.95■■■□□ 2.87
CFC1-201ENST00000259216 CFAP74Q9C0B2 1584 aa32.95■■■□□ 2.86
CFC1-201ENST00000259216 FYCO1Q9BQS8 1478 aa32.94■■■□□ 2.86
CFC1-201ENST00000259216 CDK11AQ9UQ88 783 aaPredicted RBP32.93■■■□□ 2.86
CFC1-201ENST00000259216 CCDC18Q5T9S5 1454 aa32.93■■■□□ 2.86
CFC1-201ENST00000259216 RICTORQ6R327 1708 aa32.91■■■□□ 2.86
CFC1-201ENST00000259216 DENND4BO75064 1496 aaPredicted RBP32.89■■■□□ 2.86
CFC1-201ENST00000259216 MYO5CQ9NQX4 1742 aa32.85■■■□□ 2.85
CFC1-201ENST00000259216 ZMYM4Q5VZL5 1548 aa32.82■■■□□ 2.85
CFC1-201ENST00000259216 CEP162Q5TB80 1403 aa32.81■■■□□ 2.84
CFC1-201ENST00000259216 ARHGEF40Q8TER5 1519 aa32.8■■■□□ 2.84
CFC1-201ENST00000259216 POGZQ7Z3K3 1410 aa32.77■■■□□ 2.84
CFC1-201ENST00000259216 SCAPERQ9BY12 1400 aa32.76■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms