RNA–Protein interactions for RNA: ENST00000259216.4

CFC1-201, Transcript of cripto, FRL-1, cryptic family 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFC1, Length 1,046 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFC1-201ENST00000259216 NISCHQ9Y2I1 1504 aa50.32■■■■■ 5.65
CFC1-201ENST00000259216 CCDC180Q9P1Z9 1646 aa44.91■■■■■ 4.78
CFC1-201ENST00000259216 ABCC9O60706 1549 aa44.34■■■■■ 4.69
CFC1-201ENST00000259216 RB1CC1Q8TDY2 1594 aa42.44■■■■■ 4.38
CFC1-201ENST00000259216 NACADO15069 1562 aa42.32■■■■■ 4.37
CFC1-201ENST00000259216 MYO15BQ96JP2 1530 aa42■■■■■ 4.31
CFC1-201ENST00000259216 DCAF8L2P0C7V8 631 aa41.98■■■■■ 4.31
CFC1-201ENST00000259216 ZCCHC6Q5VYS8 1495 aaKnown RBP41.85■■■■■ 4.29
CFC1-201ENST00000259216 DCAF1Q9Y4B6 1507 aa41.64■■■■■ 4.26
CFC1-201ENST00000259216 UNC13AQ9UPW8 1703 aa41.54■■■■■ 4.24
CFC1-201ENST00000259216 PABPN1Q86U42 306 aaKnown RBP eCLIP41.33■■■■■ 4.21
CFC1-201ENST00000259216 BICRAQ9NZM4 1560 aa41.31■■■■■ 4.2
CFC1-201ENST00000259216 DNAJC5BQ9UF47 199 aa41.2■■■■■ 4.19
CFC1-201ENST00000259216 SCRIBQ14160 1630 aa40.9■■■■■ 4.14
CFC1-201ENST00000259216 SHROOM4Q9ULL8 1493 aa40.76■■■■■ 4.12
CFC1-201ENST00000259216 EIF4G1Q04637 1599 aaKnown RBP40.17■■■■■ 4.02
CFC1-201ENST00000259216 CC2D2AQ9P2K1 1620 aa40.1■■■■■ 4.01
CFC1-201ENST00000259216 CECR2Q9BXF3 1484 aa39.88■■■■□ 3.98
CFC1-201ENST00000259216 SMARCA4P51532 1647 aa39.13■■■■□ 3.85
CFC1-201ENST00000259216 NCAPD3P42695 1498 aa39.11■■■■□ 3.85
CFC1-201ENST00000259216 ATAD2BQ9ULI0 1458 aa39.05■■■■□ 3.84
CFC1-201ENST00000259216 BAZ1AQ9NRL2 1556 aaPredicted RBP38.98■■■■□ 3.83
CFC1-201ENST00000259216 SMARCA2P51531 1590 aa38.91■■■■□ 3.82
CFC1-201ENST00000259216 HMGXB3Q12766 1538 aa38.85■■■■□ 3.81
CFC1-201ENST00000259216 PEG3Q9GZU2 1588 aa38.81■■■■□ 3.8
CFC1-201ENST00000259216 MROH2BQ7Z745 1585 aa38.79■■■■□ 3.8
CFC1-201ENST00000259216 BAZ1BQ9UIG0 1483 aaKnown RBP38.62■■■■□ 3.77
CFC1-201ENST00000259216 WIZO95785 1651 aa38.3■■■■□ 3.72
CFC1-201ENST00000259216 NESP48681 1621 aa38.29■■■■□ 3.72
CFC1-201ENST00000259216 RSF1Q96T23 1441 aaPredicted RBP38.19■■■■□ 3.7
CFC1-201ENST00000259216 ERCC6Q03468 1493 aa38.15■■■■□ 3.7
CFC1-201ENST00000259216 LAMC3Q9Y6N6 1575 aa38.08■■■■□ 3.69
CFC1-201ENST00000259216 CUX2O14529 1486 aa38.01■■■■□ 3.67
CFC1-201ENST00000259216 CADPSQ9ULU8 1353 aa37.89■■■■□ 3.66
CFC1-201ENST00000259216 TOP2AP11388 1531 aaKnown RBP37.88■■■■□ 3.65
CFC1-201ENST00000259216 THOC2Q8NI27 1593 aaKnown RBP37.82■■■■□ 3.65
CFC1-201ENST00000259216 PDS5BQ9NTI5 1447 aa37.78■■■■□ 3.64
CFC1-201ENST00000259216 KIF21AQ7Z4S6 1674 aa37.78■■■■□ 3.64
CFC1-201ENST00000259216 CFTRP13569 1480 aa37.61■■■■□ 3.61
CFC1-201ENST00000259216 MRC2Q9UBG0 1479 aa37.48■■■■□ 3.59
CFC1-201ENST00000259216 FANCD2Q9BXW9 1451 aa37.45■■■■□ 3.59
CFC1-201ENST00000259216 CCDC88BA6NC98 1476 aa37.44■■■■□ 3.58
CFC1-201ENST00000259216 WDR62O43379 1518 aa37.42■■■■□ 3.58
CFC1-201ENST00000259216 CEP164Q9UPV0 1460 aa37.41■■■■□ 3.58
CFC1-201ENST00000259216 DNAJC5Q9H3Z4 198 aa37.37■■■■□ 3.57
CFC1-201ENST00000259216 PRDM2Q13029 1718 aa37.22■■■■□ 3.55
CFC1-201ENST00000259216 URB2Q14146 1524 aaKnown RBP37.16■■■■□ 3.54
CFC1-201ENST00000259216 TOPBP1Q92547 1522 aa36.83■■■■□ 3.49
CFC1-201ENST00000259216 DNMBPQ6XZF7 1577 aa36.73■■■■□ 3.47
CFC1-201ENST00000259216 ABCC8Q09428 1581 aa36.72■■■■□ 3.47
CFC1-201ENST00000259216 SUPT5HO00267 1087 aaKnown RBP36.7■■■■□ 3.47
CFC1-201ENST00000259216 IFT140Q96RY7 1462 aa36.66■■■■□ 3.46
CFC1-201ENST00000259216 ZNF608Q9ULD9 1512 aaPredicted RBP36.59■■■■□ 3.45
CFC1-201ENST00000259216 TARBP1Q13395 1621 aaKnown RBP36.49■■■■□ 3.43
CFC1-201ENST00000259216 POLA1P09884 1462 aaPredicted RBP36.49■■■■□ 3.43
CFC1-201ENST00000259216 CUX1P39880 1505 aa36.42■■■■□ 3.42
CFC1-201ENST00000259216 EIF4G3O43432 1585 aaKnown RBP36.4■■■■□ 3.42
CFC1-201ENST00000259216 FGD5Q6ZNL6 1462 aa36.32■■■■□ 3.41
CFC1-201ENST00000259216 RAD54L2Q9Y4B4 1467 aa36.32■■■■□ 3.41
CFC1-201ENST00000259216 AQRO60306 1485 aaKnown RBP eCLIP36.29■■■■□ 3.4
CFC1-201ENST00000259216 SOGA1O94964 1423 aa36.27■■■■□ 3.4
CFC1-201ENST00000259216 OSCARQ8IYS5 282 aa36.27■■■■□ 3.4
CFC1-201ENST00000259216 TDRD9Q8NDG6 1382 aaKnown RBP36.15■■■■□ 3.38
CFC1-201ENST00000259216 WDR97A6NE52 1622 aa36.12■■■■□ 3.37
CFC1-201ENST00000259216 CHD1O14646 1710 aa36■■■■□ 3.35
CFC1-201ENST00000259216 ABCA10Q8WWZ4 1543 aa35.97■■■■□ 3.35
CFC1-201ENST00000259216 BIVM-ERCC5R4GMW8 1640 aa35.96■■■■□ 3.35
CFC1-201ENST00000259216 WRNQ14191 1432 aaPredicted RBP eCLIP35.95■■■■□ 3.35
CFC1-201ENST00000259216 TOP2BQ02880 1626 aa35.94■■■■□ 3.34
CFC1-201ENST00000259216 SYNJ1O43426 1573 aa35.94■■■■□ 3.34
CFC1-201ENST00000259216 SNAPC4Q5SXM2 1469 aa35.94■■■■□ 3.34
CFC1-201ENST00000259216 GRIN2BQ13224 1484 aa35.92■■■■□ 3.34
CFC1-201ENST00000259216 MAGI1Q96QZ7 1491 aaPredicted RBP35.88■■■■□ 3.33
CFC1-201ENST00000259216 ABCA5Q8WWZ7 1642 aa35.88■■■■□ 3.33
CFC1-201ENST00000259216 GAPVD1Q14C86 1478 aa35.86■■■■□ 3.33
CFC1-201ENST00000259216 RIMBP3CA6NJZ7 1639 aa35.83■■■■□ 3.33
CFC1-201ENST00000259216 RIMBP3BA6NNM3 1639 aa35.83■■■■□ 3.33
CFC1-201ENST00000259216 RIMBP3Q9UFD9 1639 aa35.83■■■■□ 3.33
CFC1-201ENST00000259216 TRIM41Q8WV44 630 aa35.81■■■■□ 3.32
CFC1-201ENST00000259216 PBRM1Q86U86 1689 aa35.8■■■■□ 3.32
CFC1-201ENST00000259216 ARHGEF11O15085 1522 aa35.78■■■■□ 3.32
CFC1-201ENST00000259216 FBLN2P98095 1184 aa35.78■■■■□ 3.32
CFC1-201ENST00000259216 SYNJ2O15056 1496 aa35.74■■■■□ 3.31
CFC1-201ENST00000259216 CLASP1Q7Z460 1538 aa35.68■■■■□ 3.3
CFC1-201ENST00000259216 CHMP7Q8WUX9 453 aaPredicted RBP35.66■■■■□ 3.3
CFC1-201ENST00000259216 ADAMTS12P58397 1594 aa35.55■■■■□ 3.28
CFC1-201ENST00000259216 ARAP1Q96P48 1450 aa35.5■■■■□ 3.27
CFC1-201ENST00000259216 ERICH3Q5RHP9 1530 aa35.5■■■■□ 3.27
CFC1-201ENST00000259216 GRIN2AQ12879 1464 aa35.48■■■■□ 3.27
CFC1-201ENST00000259216 FHAD1B1AJZ9 1412 aa35.43■■■■□ 3.26
CFC1-201ENST00000259216 NUP160Q12769 1436 aa35.39■■■■□ 3.26
CFC1-201ENST00000259216 CYB5RLQ6IPT4 315 aa35.38■■■■□ 3.25
CFC1-201ENST00000259216 CEP170Q5SW79 1584 aa35.35■■■■□ 3.25
CFC1-201ENST00000259216 KIF27Q86VH2 1401 aa35.2■■■■□ 3.23
CFC1-201ENST00000259216 IGF1RP08069 1367 aa35.19■■■■□ 3.22
CFC1-201ENST00000259216 SHROOM2Q13796 1616 aa35.17■■■■□ 3.22
CFC1-201ENST00000259216 ERCC6L2Q5T890 1561 aa35.17■■■■□ 3.22
CFC1-201ENST00000259216 CUL7Q14999 1698 aa35.05■■■■□ 3.2
CFC1-201ENST00000259216 RUSC2Q8N2Y8 1516 aa35.05■■■■□ 3.2
CFC1-201ENST00000259216 PRG4Q92954 1404 aaPredicted RBP34.91■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 140.2 ms