RNA–Protein interactions for RNA: ENST00000258052.7

SMPD2-201, Transcript of sphingomyelin phosphodiesterase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD2, Length 1,645 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD2-201ENST00000258052 CHMP7Q8WUX9 453 aaPredicted RBP33.48■■■□□ 2.95
SMPD2-201ENST00000258052 ARHGAP35Q9NRY4 1499 aa33.46■■■□□ 2.95
SMPD2-201ENST00000258052 FBLN2P98095 1184 aa33.44■■■□□ 2.94
SMPD2-201ENST00000258052 ARAP1Q96P48 1450 aa33.44■■■□□ 2.94
SMPD2-201ENST00000258052 VPS8Q8N3P4 1428 aa33.4■■■□□ 2.94
SMPD2-201ENST00000258052 IQGAP2Q13576 1575 aa33.37■■■□□ 2.93
SMPD2-201ENST00000258052 EFCAB5A4FU69 1503 aa33.34■■■□□ 2.93
SMPD2-201ENST00000258052 CEP170Q5SW79 1584 aa33.32■■■□□ 2.92
SMPD2-201ENST00000258052 KIAA0586Q9BVV6 1533 aa33.3■■■□□ 2.92
SMPD2-201ENST00000258052 CHD1O14646 1710 aa33.3■■■□□ 2.92
SMPD2-201ENST00000258052 P3H3Q8IVL6 736 aa33.27■■■□□ 2.92
SMPD2-201ENST00000258052 NUP160Q12769 1436 aa33.26■■■□□ 2.92
SMPD2-201ENST00000258052 SAMD9Q5K651 1589 aa33.26■■■□□ 2.91
SMPD2-201ENST00000258052 FHOD3Q2V2M9 1422 aa33.21■■■□□ 2.91
SMPD2-201ENST00000258052 UGGT2Q9NYU1 1516 aa33.18■■■□□ 2.9
SMPD2-201ENST00000258052 PPARGC1BQ86YN6 1023 aaKnown RBP33.16■■■□□ 2.9
SMPD2-201ENST00000258052 APLP2Q06481 763 aa33.09■■■□□ 2.89
SMPD2-201ENST00000258052 FMN1Q68DA7 1419 aa33.04■■■□□ 2.88
SMPD2-201ENST00000258052 KIAA0556O60303 1618 aa33.03■■■□□ 2.88
SMPD2-201ENST00000258052 DISP1Q96F81 1524 aa33.02■■■□□ 2.88
SMPD2-201ENST00000258052 PCF11O94913 1555 aaKnown RBP33.02■■■□□ 2.88
SMPD2-201ENST00000258052 JPH4Q96JJ6 628 aa33.01■■■□□ 2.87
SMPD2-201ENST00000258052 TTBK1Q5TCY1 1321 aaPredicted RBP32.96■■■□□ 2.87
SMPD2-201ENST00000258052 FYCO1Q9BQS8 1478 aa32.93■■■□□ 2.86
SMPD2-201ENST00000258052 CASKIN1Q8WXD9 1431 aa32.93■■■□□ 2.86
SMPD2-201ENST00000258052 TRIM26Q12899 539 aaPredicted RBP32.92■■■□□ 2.86
SMPD2-201ENST00000258052 CARMIL2Q6F5E8 1435 aa32.92■■■□□ 2.86
SMPD2-201ENST00000258052 ATP1B4Q9UN42 357 aaPredicted RBP32.91■■■□□ 2.86
SMPD2-201ENST00000258052 CLASP1Q7Z460 1538 aa32.87■■■□□ 2.85
SMPD2-201ENST00000258052 PCGF6Q9BYE7 350 aa32.86■■■□□ 2.85
SMPD2-201ENST00000258052 SHROOM2Q13796 1616 aa32.85■■■□□ 2.85
SMPD2-201ENST00000258052 TIAM1Q13009 1591 aa32.84■■■□□ 2.85
SMPD2-201ENST00000258052 PRG4Q92954 1404 aaPredicted RBP32.83■■■□□ 2.85
SMPD2-201ENST00000258052 MAP3K1Q13233 1512 aa32.83■■■□□ 2.85
SMPD2-201ENST00000258052 CFAP43Q8NDM7 1665 aa32.81■■■□□ 2.84
SMPD2-201ENST00000258052 KANK4Q5T7N3 995 aaPredicted RBP32.78■■■□□ 2.84
SMPD2-201ENST00000258052 HECW1Q76N89 1606 aa32.76■■■□□ 2.83
SMPD2-201ENST00000258052 LRRIQ1Q96JM4 1722 aa32.75■■■□□ 2.83
SMPD2-201ENST00000258052 RAPGEF6Q8TEU7 1601 aa32.7■■■□□ 2.82
SMPD2-201ENST00000258052 LRRC9Q6ZRR7 1453 aa32.67■■■□□ 2.82
SMPD2-201ENST00000258052 OSCARQ8IYS5 282 aa32.66■■■□□ 2.82
SMPD2-201ENST00000258052 ERCC6L2Q5T890 1561 aa32.65■■■□□ 2.82
SMPD2-201ENST00000258052 CCDC18Q5T9S5 1454 aa32.64■■■□□ 2.82
SMPD2-201ENST00000258052 PLB1Q6P1J6 1458 aa32.62■■■□□ 2.81
SMPD2-201ENST00000258052 EPRSP07814 1512 aaKnown RBP32.61■■■□□ 2.81
SMPD2-201ENST00000258052 PTPRGP23470 1445 aa32.6■■■□□ 2.81
SMPD2-201ENST00000258052 NUP153P49790 1475 aaKnown RBP32.58■■■□□ 2.81
SMPD2-201ENST00000258052 ABCA8O94911 1581 aa32.55■■■□□ 2.8
SMPD2-201ENST00000258052 CDK13Q14004 1512 aaKnown RBP32.55■■■□□ 2.8
SMPD2-201ENST00000258052 ARID3CA6NKF2 412 aa32.55■■■□□ 2.8
SMPD2-201ENST00000258052 MTUS2Q5JR59 1369 aa32.52■■■□□ 2.8
SMPD2-201ENST00000258052 EHBP1L1Q8N3D4 1523 aa32.46■■■□□ 2.79
SMPD2-201ENST00000258052 MAGI3Q5TCQ9 1506 aa32.45■■■□□ 2.78
SMPD2-201ENST00000258052 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.43■■■□□ 2.78
SMPD2-201ENST00000258052 HNRNPUL2Q1KMD3 747 aaKnown RBP32.43■■■□□ 2.78
SMPD2-201ENST00000258052 UACAQ9BZF9 1416 aa32.41■■■□□ 2.78
SMPD2-201ENST00000258052 SUPT6HQ7KZ85 1726 aaKnown RBP32.39■■■□□ 2.78
SMPD2-201ENST00000258052 PHLDB1Q86UU1 1377 aa32.37■■■□□ 2.77
SMPD2-201ENST00000258052 CDK11AQ9UQ88 783 aaPredicted RBP32.34■■■□□ 2.77
SMPD2-201ENST00000258052 RRBP1Q9P2E9 1410 aaKnown RBP32.33■■■□□ 2.77
SMPD2-201ENST00000258052 ATP10BO94823 1461 aa32.32■■■□□ 2.77
SMPD2-201ENST00000258052 ABCC2Q92887 1545 aa32.32■■■□□ 2.76
SMPD2-201ENST00000258052 NCOA2Q15596 1464 aa32.32■■■□□ 2.76
SMPD2-201ENST00000258052 CCNB3Q8WWL7 1395 aa32.27■■■□□ 2.76
SMPD2-201ENST00000258052 ARHGEF11O15085 1522 aa32.24■■■□□ 2.75
SMPD2-201ENST00000258052 TROQ12816 1431 aaPredicted RBP32.24■■■□□ 2.75
SMPD2-201ENST00000258052 UHRF1BP1LA0JNW5 1464 aa32.24■■■□□ 2.75
SMPD2-201ENST00000258052 PLEKHD1A6NEE1 506 aa32.19■■■□□ 2.74
SMPD2-201ENST00000258052 MYOM3Q5VTT5 1437 aa32.17■■■□□ 2.74
SMPD2-201ENST00000258052 ADCY10Q96PN6 1610 aa32.15■■■□□ 2.74
SMPD2-201ENST00000258052 FGD6Q6ZV73 1430 aa32.15■■■□□ 2.74
SMPD2-201ENST00000258052 ZCCHC11Q5TAX3 1644 aaKnown RBP32.14■■■□□ 2.73
SMPD2-201ENST00000258052 KIF14Q15058 1648 aa32.12■■■□□ 2.73
SMPD2-201ENST00000258052 FAM50AQ14320 339 aaKnown RBP32.11■■■□□ 2.73
SMPD2-201ENST00000258052 KDM5BQ9UGL1 1544 aa32.1■■■□□ 2.73
SMPD2-201ENST00000258052 PTPN23Q9H3S7 1636 aa32.03■■■□□ 2.72
SMPD2-201ENST00000258052 ITGAEP38570 1179 aa32.03■■■□□ 2.72
SMPD2-201ENST00000258052 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.03■■■□□ 2.72
SMPD2-201ENST00000258052 RIMBP3CA6NJZ7 1639 aa32■■■□□ 2.71
SMPD2-201ENST00000258052 RIMBP3BA6NNM3 1639 aa32■■■□□ 2.71
SMPD2-201ENST00000258052 RIMBP3Q9UFD9 1639 aa32■■■□□ 2.71
SMPD2-201ENST00000258052 MIA2Q96PC5 1412 aa32■■■□□ 2.71
SMPD2-201ENST00000258052 ITSN2Q9NZM3 1697 aa31.99■■■□□ 2.71
SMPD2-201ENST00000258052 ABCC10Q5T3U5 1492 aa31.96■■■□□ 2.71
SMPD2-201ENST00000258052 TCOF1Q13428 1488 aaKnown RBP31.95■■■□□ 2.71
SMPD2-201ENST00000258052 GPATCH8Q9UKJ3 1502 aaKnown RBP31.93■■■□□ 2.7
SMPD2-201ENST00000258052 CDC42BPAQ5VT25 1732 aa31.92■■■□□ 2.7
SMPD2-201ENST00000258052 NPM1P06748 294 aaKnown RBP eCLIP31.87■■■□□ 2.69
SMPD2-201ENST00000258052 KCNH8Q96L42 1107 aa31.87■■■□□ 2.69
SMPD2-201ENST00000258052 CFDP1Q9UEE9 299 aaPredicted RBP31.86■■■□□ 2.69
SMPD2-201ENST00000258052 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.85■■■□□ 2.69
SMPD2-201ENST00000258052 TTC37Q6PGP7 1564 aa31.85■■■□□ 2.69
SMPD2-201ENST00000258052 WDR7Q9Y4E6 1490 aa31.84■■■□□ 2.69
SMPD2-201ENST00000258052 CYB5RLQ6IPT4 315 aa31.83■■■□□ 2.69
SMPD2-201ENST00000258052 PREX2Q70Z35 1606 aa31.8■■■□□ 2.68
SMPD2-201ENST00000258052 ASXL2Q76L83 1435 aa31.79■■■□□ 2.68
SMPD2-201ENST00000258052 ZNF644Q9H582 1327 aaPredicted RBP31.79■■■□□ 2.68
SMPD2-201ENST00000258052 CAMSAP2Q08AD1 1489 aa31.79■■■□□ 2.68
SMPD2-201ENST00000258052 ZNF777Q9ULD5 760 aaPredicted RBP31.78■■■□□ 2.68
SMPD2-201ENST00000258052 MYO5CQ9NQX4 1742 aa31.77■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms