RNA–Protein interactions for RNA: ENST00000256443.7

CDK7-201, Transcript of cyclin dependent kinase 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK7, Length 1,439 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-201ENST00000256443 KIAA0586Q9BVV6 1533 aa21.72■■□□□ 1.07
CDK7-201ENST00000256443 JPH4Q96JJ6 628 aa21.68■■□□□ 1.06
CDK7-201ENST00000256443 EEA1Q15075 1411 aa21.67■■□□□ 1.06
CDK7-201ENST00000256443 CHIC1Q5VXU3 224 aa21.66■■□□□ 1.06
CDK7-201ENST00000256443 ERCC6L2Q5T890 1561 aa21.66■■□□□ 1.06
CDK7-201ENST00000256443 PRG4Q92954 1404 aaPredicted RBP21.65■■□□□ 1.06
CDK7-201ENST00000256443 PRXQ9BXM0 1461 aa21.62■■□□□ 1.05
CDK7-201ENST00000256443 IQGAP2Q13576 1575 aa21.61■■□□□ 1.05
CDK7-201ENST00000256443 CSRNP3Q8WYN3 585 aa21.59■■□□□ 1.05
CDK7-201ENST00000256443 CTTNBP2Q8WZ74 1663 aa21.57■■□□□ 1.04
CDK7-201ENST00000256443 CARMIL2Q6F5E8 1435 aa21.52■■□□□ 1.04
CDK7-201ENST00000256443 UGGT2Q9NYU1 1516 aa21.48■■□□□ 1.03
CDK7-201ENST00000256443 FAM9AQ8IZU1 332 aaPredicted RBP21.45■■□□□ 1.02
CDK7-201ENST00000256443 KIF21BO75037 1637 aa21.43■■□□□ 1.02
CDK7-201ENST00000256443 DISP1Q96F81 1524 aa21.42■■□□□ 1.02
CDK7-201ENST00000256443 TNIKQ9UKE5 1360 aa21.42■■□□□ 1.02
CDK7-201ENST00000256443 KIAA0556O60303 1618 aa21.4■■□□□ 1.02
CDK7-201ENST00000256443 GOLGA3Q08378 1498 aa21.39■■□□□ 1.02
CDK7-201ENST00000256443 PTPRGP23470 1445 aa21.39■■□□□ 1.01
CDK7-201ENST00000256443 AEBP2Q6ZN18 517 aaPredicted RBP21.34■■□□□ 1.01
CDK7-201ENST00000256443 ADCY10Q96PN6 1610 aa21.33■■□□□ 1.01
CDK7-201ENST00000256443 NPM1P06748 294 aaKnown RBP eCLIP21.3■■□□□ 1
CDK7-201ENST00000256443 TRHP20396 242 aaPredicted RBP21.3■■□□□ 1
CDK7-201ENST00000256443 TTBK1Q5TCY1 1321 aaPredicted RBP21.28■■□□□ 1
CDK7-201ENST00000256443 UHRF1BP1LA0JNW5 1464 aa21.27■■□□□ 1
CDK7-201ENST00000256443 UACAQ9BZF9 1416 aa21.26■□□□□ 0.99
CDK7-201ENST00000256443 SAMD9Q5K651 1589 aa21.26■□□□□ 0.99
CDK7-201ENST00000256443 MAPKBP1O60336 1514 aa21.24■□□□□ 0.99
CDK7-201ENST00000256443 ABCC2Q92887 1545 aa21.24■□□□□ 0.99
CDK7-201ENST00000256443 UBTFP17480 764 aaKnown RBP21.2■□□□□ 0.98
CDK7-201ENST00000256443 EFCAB5A4FU69 1503 aa21.18■□□□□ 0.98
CDK7-201ENST00000256443 ABCA8O94911 1581 aa21.16■□□□□ 0.98
CDK7-201ENST00000256443 KDM5BQ9UGL1 1544 aa21.16■□□□□ 0.98
CDK7-201ENST00000256443 KIF13AQ9H1H9 1805 aa21.15■□□□□ 0.98
CDK7-201ENST00000256443 PLB1Q6P1J6 1458 aa21.15■□□□□ 0.98
CDK7-201ENST00000256443 P3H3Q8IVL6 736 aa21.13■□□□□ 0.97
CDK7-201ENST00000256443 EHMT2Q96KQ7 1210 aa21.12■□□□□ 0.97
CDK7-201ENST00000256443 ABCC10Q5T3U5 1492 aa21.12■□□□□ 0.97
CDK7-201ENST00000256443 ZCCHC11Q5TAX3 1644 aaKnown RBP21.12■□□□□ 0.97
CDK7-201ENST00000256443 RANGAP1P46060 587 aaPredicted RBP21.11■□□□□ 0.97
CDK7-201ENST00000256443 DIP2BQ9P265 1576 aa21.11■□□□□ 0.97
CDK7-201ENST00000256443 FHOD3Q2V2M9 1422 aa21.07■□□□□ 0.96
CDK7-201ENST00000256443 ASXL2Q76L83 1435 aa21.07■□□□□ 0.96
CDK7-201ENST00000256443 RAPGEF6Q8TEU7 1601 aa21.06■□□□□ 0.96
CDK7-201ENST00000256443 FAM69CQ0P6D2 419 aa21.04■□□□□ 0.96
CDK7-201ENST00000256443 ARHGAP35Q9NRY4 1499 aa21.01■□□□□ 0.95
CDK7-201ENST00000256443 GLI2P10070 1586 aa21■□□□□ 0.95
CDK7-201ENST00000256443 WDR7Q9Y4E6 1490 aa20.98■□□□□ 0.95
CDK7-201ENST00000256443 FMN1Q68DA7 1419 aa20.97■□□□□ 0.95
CDK7-201ENST00000256443 EPRSP07814 1512 aaKnown RBP20.96■□□□□ 0.95
CDK7-201ENST00000256443 ATP10BO94823 1461 aa20.96■□□□□ 0.95
CDK7-201ENST00000256443 NUP153P49790 1475 aaKnown RBP20.94■□□□□ 0.94
CDK7-201ENST00000256443 TSPOAP1O95153 1857 aa20.92■□□□□ 0.94
CDK7-201ENST00000256443 MAP3K4Q9Y6R4 1608 aa20.89■□□□□ 0.94
CDK7-201ENST00000256443 HECW1Q76N89 1606 aa20.89■□□□□ 0.93
CDK7-201ENST00000256443 CLIP1P30622 1438 aa20.88■□□□□ 0.93
CDK7-201ENST00000256443 ARID3CA6NKF2 412 aa20.87■□□□□ 0.93
CDK7-201ENST00000256443 CFAP43Q8NDM7 1665 aa20.87■□□□□ 0.93
CDK7-201ENST00000256443 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.87■□□□□ 0.93
CDK7-201ENST00000256443 HNRNPUL2Q1KMD3 747 aaKnown RBP20.87■□□□□ 0.93
CDK7-201ENST00000256443 PPRC1Q5VV67 1664 aaKnown RBP20.84■□□□□ 0.93
CDK7-201ENST00000256443 KCNH8Q96L42 1107 aa20.83■□□□□ 0.93
CDK7-201ENST00000256443 TEX14Q8IWB6 1497 aa20.82■□□□□ 0.92
CDK7-201ENST00000256443 PLEKHD1A6NEE1 506 aa20.79■□□□□ 0.92
CDK7-201ENST00000256443 ABCA9Q8IUA7 1624 aa20.79■□□□□ 0.92
CDK7-201ENST00000256443 ATP1B4Q9UN42 357 aaPredicted RBP20.78■□□□□ 0.92
CDK7-201ENST00000256443 CD109Q6YHK3 1445 aa20.78■□□□□ 0.92
CDK7-201ENST00000256443 CASKIN1Q8WXD9 1431 aa20.78■□□□□ 0.92
CDK7-201ENST00000256443 CDK13Q14004 1512 aaKnown RBP20.78■□□□□ 0.92
CDK7-201ENST00000256443 KDM6BO15054 1643 aa20.78■□□□□ 0.92
CDK7-201ENST00000256443 CEP162Q5TB80 1403 aa20.77■□□□□ 0.92
CDK7-201ENST00000256443 MAGI3Q5TCQ9 1506 aa20.77■□□□□ 0.92
CDK7-201ENST00000256443 PCF11O94913 1555 aaKnown RBP20.77■□□□□ 0.92
CDK7-201ENST00000256443 FYCO1Q9BQS8 1478 aa20.74■□□□□ 0.91
CDK7-201ENST00000256443 CDK11AQ9UQ88 783 aaPredicted RBP20.74■□□□□ 0.91
CDK7-201ENST00000256443 LRRIQ1Q96JM4 1722 aa20.74■□□□□ 0.91
CDK7-201ENST00000256443 CCDC18Q5T9S5 1454 aa20.74■□□□□ 0.91
CDK7-201ENST00000256443 LOC105371045A0A1W2PR82 267 aa20.72■□□□□ 0.91
CDK7-201ENST00000256443 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.66■□□□□ 0.9
CDK7-201ENST00000256443 TROQ12816 1431 aaPredicted RBP20.65■□□□□ 0.9
CDK7-201ENST00000256443 PHLDB1Q86UU1 1377 aa20.64■□□□□ 0.9
CDK7-201ENST00000256443 KIF14Q15058 1648 aa20.63■□□□□ 0.89
CDK7-201ENST00000256443 TTC37Q6PGP7 1564 aa20.63■□□□□ 0.89
CDK7-201ENST00000256443 NEO1Q92859 1461 aa20.62■□□□□ 0.89
CDK7-201ENST00000256443 CFAP74Q9C0B2 1584 aa20.61■□□□□ 0.89
CDK7-201ENST00000256443 COL17A1Q9UMD9 1497 aaPredicted RBP20.6■□□□□ 0.89
CDK7-201ENST00000256443 ARAP3Q8WWN8 1544 aa20.59■□□□□ 0.89
CDK7-201ENST00000256443 MYO5CQ9NQX4 1742 aa20.58■□□□□ 0.89
CDK7-201ENST00000256443 VPS8Q8N3P4 1428 aa20.55■□□□□ 0.88
CDK7-201ENST00000256443 PLCH2O75038 1416 aa20.54■□□□□ 0.88
CDK7-201ENST00000256443 FANCAO15360 1455 aa20.54■□□□□ 0.88
CDK7-201ENST00000256443 AKNAQ7Z591 1439 aa20.5■□□□□ 0.87
CDK7-201ENST00000256443 MTUS2Q5JR59 1369 aa20.48■□□□□ 0.87
CDK7-201ENST00000256443 EHBP1L1Q8N3D4 1523 aa20.47■□□□□ 0.87
CDK7-201ENST00000256443 PREX2Q70Z35 1606 aa20.47■□□□□ 0.87
CDK7-201ENST00000256443 EFCAB2Q5VUJ9 269 aa20.46■□□□□ 0.87
CDK7-201ENST00000256443 CDC42BPBQ9Y5S2 1711 aa20.45■□□□□ 0.87
CDK7-201ENST00000256443 ARHGAP5Q13017 1502 aa20.45■□□□□ 0.86
CDK7-201ENST00000256443 DENND4BO75064 1496 aaPredicted RBP20.45■□□□□ 0.86
CDK7-201ENST00000256443 TIAM1Q13009 1591 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms