RNA–Protein interactions for RNA: ENST00000256443.7

CDK7-201, Transcript of cyclin dependent kinase 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK7, Length 1,439 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-201ENST00000256443 NISCHQ9Y2I1 1504 aa31.37■■■□□ 2.61
CDK7-201ENST00000256443 CCDC180Q9P1Z9 1646 aa27.98■■■□□ 2.07
CDK7-201ENST00000256443 ABCC9O60706 1549 aa27.27■■□□□ 1.96
CDK7-201ENST00000256443 RB1CC1Q8TDY2 1594 aa26.31■■□□□ 1.8
CDK7-201ENST00000256443 NACADO15069 1562 aa26.28■■□□□ 1.8
CDK7-201ENST00000256443 DCAF8L2P0C7V8 631 aa26.14■■□□□ 1.78
CDK7-201ENST00000256443 ZCCHC6Q5VYS8 1495 aaKnown RBP26.14■■□□□ 1.78
CDK7-201ENST00000256443 MYO15BQ96JP2 1530 aa26.14■■□□□ 1.77
CDK7-201ENST00000256443 DCAF1Q9Y4B6 1507 aa26.01■■□□□ 1.75
CDK7-201ENST00000256443 UNC13AQ9UPW8 1703 aa25.71■■□□□ 1.71
CDK7-201ENST00000256443 BICRAQ9NZM4 1560 aa25.47■■□□□ 1.67
CDK7-201ENST00000256443 SCRIBQ14160 1630 aa25.44■■□□□ 1.66
CDK7-201ENST00000256443 PABPN1Q86U42 306 aaKnown RBP eCLIP25.44■■□□□ 1.66
CDK7-201ENST00000256443 SHROOM4Q9ULL8 1493 aa25.29■■□□□ 1.64
CDK7-201ENST00000256443 DNAJC5BQ9UF47 199 aa24.97■■□□□ 1.59
CDK7-201ENST00000256443 EIF4G1Q04637 1599 aaKnown RBP24.81■■□□□ 1.56
CDK7-201ENST00000256443 CC2D2AQ9P2K1 1620 aa24.71■■□□□ 1.55
CDK7-201ENST00000256443 CECR2Q9BXF3 1484 aa24.53■■□□□ 1.52
CDK7-201ENST00000256443 SMARCA4P51532 1647 aa24.36■■□□□ 1.49
CDK7-201ENST00000256443 BAZ1AQ9NRL2 1556 aaPredicted RBP24.35■■□□□ 1.49
CDK7-201ENST00000256443 SMARCA2P51531 1590 aa24.23■■□□□ 1.47
CDK7-201ENST00000256443 NCAPD3P42695 1498 aa24.22■■□□□ 1.47
CDK7-201ENST00000256443 ATAD2BQ9ULI0 1458 aa24.21■■□□□ 1.47
CDK7-201ENST00000256443 MROH2BQ7Z745 1585 aa24.15■■□□□ 1.46
CDK7-201ENST00000256443 PEG3Q9GZU2 1588 aa24.15■■□□□ 1.46
CDK7-201ENST00000256443 HMGXB3Q12766 1538 aa24.12■■□□□ 1.45
CDK7-201ENST00000256443 BAZ1BQ9UIG0 1483 aaKnown RBP24.03■■□□□ 1.44
CDK7-201ENST00000256443 WIZO95785 1651 aa23.91■■□□□ 1.42
CDK7-201ENST00000256443 RSF1Q96T23 1441 aaPredicted RBP23.86■■□□□ 1.41
CDK7-201ENST00000256443 TOP2AP11388 1531 aaKnown RBP23.68■■□□□ 1.38
CDK7-201ENST00000256443 LAMC3Q9Y6N6 1575 aa23.62■■□□□ 1.37
CDK7-201ENST00000256443 NESP48681 1621 aa23.58■■□□□ 1.37
CDK7-201ENST00000256443 ERCC6Q03468 1493 aa23.55■■□□□ 1.36
CDK7-201ENST00000256443 CADPSQ9ULU8 1353 aa23.5■■□□□ 1.35
CDK7-201ENST00000256443 PDS5BQ9NTI5 1447 aa23.44■■□□□ 1.34
CDK7-201ENST00000256443 KIF21AQ7Z4S6 1674 aa23.37■■□□□ 1.33
CDK7-201ENST00000256443 CFTRP13569 1480 aa23.36■■□□□ 1.33
CDK7-201ENST00000256443 CCDC88BA6NC98 1476 aa23.36■■□□□ 1.33
CDK7-201ENST00000256443 CUX2O14529 1486 aa23.33■■□□□ 1.33
CDK7-201ENST00000256443 THOC2Q8NI27 1593 aaKnown RBP23.29■■□□□ 1.32
CDK7-201ENST00000256443 PRDM2Q13029 1718 aa23.27■■□□□ 1.32
CDK7-201ENST00000256443 FANCD2Q9BXW9 1451 aa23.23■■□□□ 1.31
CDK7-201ENST00000256443 CEP164Q9UPV0 1460 aa23.23■■□□□ 1.31
CDK7-201ENST00000256443 SUPT5HO00267 1087 aaKnown RBP23.21■■□□□ 1.31
CDK7-201ENST00000256443 MRC2Q9UBG0 1479 aa23.19■■□□□ 1.3
CDK7-201ENST00000256443 WDR62O43379 1518 aa23.12■■□□□ 1.29
CDK7-201ENST00000256443 URB2Q14146 1524 aaKnown RBP22.98■■□□□ 1.27
CDK7-201ENST00000256443 ABCC8Q09428 1581 aa22.92■■□□□ 1.26
CDK7-201ENST00000256443 DNMBPQ6XZF7 1577 aa22.86■■□□□ 1.25
CDK7-201ENST00000256443 TOPBP1Q92547 1522 aa22.85■■□□□ 1.25
CDK7-201ENST00000256443 IFT140Q96RY7 1462 aa22.74■■□□□ 1.23
CDK7-201ENST00000256443 POLA1P09884 1462 aaPredicted RBP22.66■■□□□ 1.22
CDK7-201ENST00000256443 CUX1P39880 1505 aa22.66■■□□□ 1.22
CDK7-201ENST00000256443 TARBP1Q13395 1621 aaKnown RBP22.62■■□□□ 1.21
CDK7-201ENST00000256443 FGD5Q6ZNL6 1462 aa22.6■■□□□ 1.21
CDK7-201ENST00000256443 ZNF608Q9ULD9 1512 aaPredicted RBP22.58■■□□□ 1.2
CDK7-201ENST00000256443 DNAJC5Q9H3Z4 198 aa22.57■■□□□ 1.2
CDK7-201ENST00000256443 SOGA1O94964 1423 aa22.56■■□□□ 1.2
CDK7-201ENST00000256443 EIF4G3O43432 1585 aaKnown RBP22.54■■□□□ 1.2
CDK7-201ENST00000256443 WRNQ14191 1432 aaPredicted RBP eCLIP22.54■■□□□ 1.2
CDK7-201ENST00000256443 RAD54L2Q9Y4B4 1467 aa22.52■■□□□ 1.2
CDK7-201ENST00000256443 BIVM-ERCC5R4GMW8 1640 aa22.52■■□□□ 1.2
CDK7-201ENST00000256443 WDR97A6NE52 1622 aa22.51■■□□□ 1.19
CDK7-201ENST00000256443 TOP2BQ02880 1626 aa22.51■■□□□ 1.19
CDK7-201ENST00000256443 SYNJ1O43426 1573 aa22.46■■□□□ 1.19
CDK7-201ENST00000256443 AQRO60306 1485 aaKnown RBP eCLIP22.44■■□□□ 1.182e-6■■■■□ 22
CDK7-201ENST00000256443 TDRD9Q8NDG6 1382 aaKnown RBP22.4■■□□□ 1.18
CDK7-201ENST00000256443 ABCA10Q8WWZ4 1543 aa22.4■■□□□ 1.18
CDK7-201ENST00000256443 OSCARQ8IYS5 282 aa22.32■■□□□ 1.16
CDK7-201ENST00000256443 GRIN2BQ13224 1484 aa22.32■■□□□ 1.16
CDK7-201ENST00000256443 ABCA5Q8WWZ7 1642 aa22.32■■□□□ 1.16
CDK7-201ENST00000256443 GAPVD1Q14C86 1478 aa22.31■■□□□ 1.16
CDK7-201ENST00000256443 PBRM1Q86U86 1689 aa22.31■■□□□ 1.16
CDK7-201ENST00000256443 MAGI1Q96QZ7 1491 aaPredicted RBP22.28■■□□□ 1.16
CDK7-201ENST00000256443 CHD1O14646 1710 aa22.27■■□□□ 1.16
CDK7-201ENST00000256443 SNAPC4Q5SXM2 1469 aa22.27■■□□□ 1.16
CDK7-201ENST00000256443 SYNJ2O15056 1496 aa22.18■■□□□ 1.14
CDK7-201ENST00000256443 FBLN2P98095 1184 aa22.18■■□□□ 1.14
CDK7-201ENST00000256443 ERICH3Q5RHP9 1530 aa22.16■■□□□ 1.14
CDK7-201ENST00000256443 CHMP7Q8WUX9 453 aaPredicted RBP22.14■■□□□ 1.14
CDK7-201ENST00000256443 ADAMTS12P58397 1594 aa22.1■■□□□ 1.13
CDK7-201ENST00000256443 KIF27Q86VH2 1401 aa22.07■■□□□ 1.12
CDK7-201ENST00000256443 FHAD1B1AJZ9 1412 aa22.06■■□□□ 1.12
CDK7-201ENST00000256443 GRIN2AQ12879 1464 aa22.03■■□□□ 1.12
CDK7-201ENST00000256443 CLASP1Q7Z460 1538 aa22.02■■□□□ 1.11
CDK7-201ENST00000256443 RIMBP3CA6NJZ7 1639 aa21.98■■□□□ 1.11
CDK7-201ENST00000256443 RIMBP3BA6NNM3 1639 aa21.98■■□□□ 1.11
CDK7-201ENST00000256443 RIMBP3Q9UFD9 1639 aa21.98■■□□□ 1.11
CDK7-201ENST00000256443 CUL7Q14999 1698 aa21.97■■□□□ 1.11
CDK7-201ENST00000256443 ARHGEF11O15085 1522 aa21.97■■□□□ 1.11
CDK7-201ENST00000256443 TRIM41Q8WV44 630 aa21.97■■□□□ 1.11
CDK7-201ENST00000256443 IGF1RP08069 1367 aa21.94■■□□□ 1.1
CDK7-201ENST00000256443 NUP160Q12769 1436 aa21.93■■□□□ 1.1
CDK7-201ENST00000256443 CEP170Q5SW79 1584 aa21.91■■□□□ 1.1
CDK7-201ENST00000256443 CARMIL1Q5VZK9 1371 aa21.84■■□□□ 1.09
CDK7-201ENST00000256443 RUSC2Q8N2Y8 1516 aa21.79■■□□□ 1.08
CDK7-201ENST00000256443 SHROOM2Q13796 1616 aa21.79■■□□□ 1.08
CDK7-201ENST00000256443 ARAP1Q96P48 1450 aa21.78■■□□□ 1.08
CDK7-201ENST00000256443 RAPGEF2Q9Y4G8 1499 aa21.73■■□□□ 1.07
CDK7-201ENST00000256443 CYB5RLQ6IPT4 315 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms