RNA–Protein interactions for RNA: ENST00000252622.14

LSM7-201, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM7, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-201ENST00000252622 ERCC6L2Q5T890 1561 aa42.39■■■■■ 4.38
LSM7-201ENST00000252622 RAPGEF2Q9Y4G8 1499 aa42.36■■■■■ 4.37
LSM7-201ENST00000252622 JPH4Q96JJ6 628 aa42.34■■■■■ 4.37
LSM7-201ENST00000252622 PRG4Q92954 1404 aaPredicted RBP42.31■■■■■ 4.36
LSM7-201ENST00000252622 PRXQ9BXM0 1461 aa42.21■■■■■ 4.35
LSM7-201ENST00000252622 CHIC1Q5VXU3 224 aa42.2■■■■■ 4.35
LSM7-201ENST00000252622 EEA1Q15075 1411 aa42.19■■■■■ 4.34
LSM7-201ENST00000252622 IQGAP2Q13576 1575 aa42.15■■■■■ 4.34
LSM7-201ENST00000252622 CSRNP3Q8WYN3 585 aa42.07■■■■■ 4.33
LSM7-201ENST00000252622 CTTNBP2Q8WZ74 1663 aa41.96■■■■■ 4.31
LSM7-201ENST00000252622 CARMIL2Q6F5E8 1435 aa41.95■■■■■ 4.31
LSM7-201ENST00000252622 UGGT2Q9NYU1 1516 aa41.94■■■■■ 4.3
LSM7-201ENST00000252622 DISP1Q96F81 1524 aa41.86■■■■■ 4.29
LSM7-201ENST00000252622 FAM9AQ8IZU1 332 aaPredicted RBP41.83■■■■■ 4.29
LSM7-201ENST00000252622 TNIKQ9UKE5 1360 aa41.82■■■■■ 4.29
LSM7-201ENST00000252622 PTPRGP23470 1445 aa41.78■■■■■ 4.28
LSM7-201ENST00000252622 KIAA0556O60303 1618 aa41.77■■■■■ 4.28
LSM7-201ENST00000252622 KIF21BO75037 1637 aa41.75■■■■■ 4.27
LSM7-201ENST00000252622 ADCY10Q96PN6 1610 aa41.7■■■■■ 4.27
LSM7-201ENST00000252622 GOLGA3Q08378 1498 aa41.69■■■■■ 4.26
LSM7-201ENST00000252622 TRHP20396 242 aaPredicted RBP41.67■■■■■ 4.26
LSM7-201ENST00000252622 TTBK1Q5TCY1 1321 aaPredicted RBP41.58■■■■■ 4.25
LSM7-201ENST00000252622 NPM1P06748 294 aaKnown RBP eCLIP41.54■■■■■ 4.24
LSM7-201ENST00000252622 UHRF1BP1LA0JNW5 1464 aa41.53■■■■■ 4.24
LSM7-201ENST00000252622 UACAQ9BZF9 1416 aa41.52■■■■■ 4.24
LSM7-201ENST00000252622 MAPKBP1O60336 1514 aa41.5■■■■■ 4.23
LSM7-201ENST00000252622 ABCC2Q92887 1545 aa41.48■■■■■ 4.23
LSM7-201ENST00000252622 SAMD9Q5K651 1589 aa41.46■■■■■ 4.23
LSM7-201ENST00000252622 PLB1Q6P1J6 1458 aa41.33■■■■■ 4.21
LSM7-201ENST00000252622 KDM5BQ9UGL1 1544 aa41.32■■■■■ 4.2
LSM7-201ENST00000252622 ABCA8O94911 1581 aa41.31■■■■■ 4.2
LSM7-201ENST00000252622 ABCC10Q5T3U5 1492 aa41.3■■■■■ 4.2
LSM7-201ENST00000252622 UBTFP17480 764 aaKnown RBP41.28■■■■■ 4.2
LSM7-201ENST00000252622 KIF13AQ9H1H9 1805 aa41.28■■■■■ 4.2
LSM7-201ENST00000252622 P3H3Q8IVL6 736 aa41.27■■■■■ 4.2
LSM7-201ENST00000252622 EFCAB5A4FU69 1503 aa41.27■■■■■ 4.2
LSM7-201ENST00000252622 EHMT2Q96KQ7 1210 aa41.24■■■■■ 4.19
LSM7-201ENST00000252622 DIP2BQ9P265 1576 aa41.24■■■■■ 4.19
LSM7-201ENST00000252622 ZCCHC11Q5TAX3 1644 aaKnown RBP41.2■■■■■ 4.19
LSM7-201ENST00000252622 RANGAP1P46060 587 aaPredicted RBP41.2■■■■■ 4.19
LSM7-201ENST00000252622 ASXL2Q76L83 1435 aa41.18■■■■■ 4.18
LSM7-201ENST00000252622 FHOD3Q2V2M9 1422 aa41.16■■■■■ 4.18
LSM7-201ENST00000252622 FAM69CQ0P6D2 419 aa41.14■■■■■ 4.18
LSM7-201ENST00000252622 RAPGEF6Q8TEU7 1601 aa41.06■■■■■ 4.16
LSM7-201ENST00000252622 GLI2P10070 1586 aa41.01■■■■■ 4.16
LSM7-201ENST00000252622 ARHGAP35Q9NRY4 1499 aa40.99■■■■■ 4.15
LSM7-201ENST00000252622 WDR7Q9Y4E6 1490 aa40.98■■■■■ 4.15
LSM7-201ENST00000252622 EPRSP07814 1512 aaKnown RBP40.97■■■■■ 4.15
LSM7-201ENST00000252622 ATP10BO94823 1461 aa40.94■■■■■ 4.14
LSM7-201ENST00000252622 NUP153P49790 1475 aaKnown RBP40.91■■■■■ 4.14
LSM7-201ENST00000252622 FMN1Q68DA7 1419 aa40.85■■■■■ 4.13
LSM7-201ENST00000252622 ARID3CA6NKF2 412 aa40.83■■■■■ 4.13
LSM7-201ENST00000252622 MAP3K4Q9Y6R4 1608 aa40.79■■■■■ 4.12
LSM7-201ENST00000252622 TSPOAP1O95153 1857 aa40.79■■■■■ 4.12
LSM7-201ENST00000252622 PPRC1Q5VV67 1664 aaKnown RBP40.73■■■■■ 4.11
LSM7-201ENST00000252622 CLIP1P30622 1438 aa40.7■■■■■ 4.11
LSM7-201ENST00000252622 HECW1Q76N89 1606 aa40.68■■■■■ 4.1
LSM7-201ENST00000252622 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP40.68■■■■■ 4.1
LSM7-201ENST00000252622 HNRNPUL2Q1KMD3 747 aaKnown RBP40.68■■■■■ 4.1
LSM7-201ENST00000252622 KCNH8Q96L42 1107 aa40.68■■■■■ 4.1
LSM7-201ENST00000252622 CFAP43Q8NDM7 1665 aa40.66■■■■■ 4.1
LSM7-201ENST00000252622 TEX14Q8IWB6 1497 aa40.63■■■■■ 4.09
LSM7-201ENST00000252622 KDM6BO15054 1643 aa40.59■■■■■ 4.09
LSM7-201ENST00000252622 CD109Q6YHK3 1445 aa40.59■■■■■ 4.09
LSM7-201ENST00000252622 CDK13Q14004 1512 aaKnown RBP40.58■■■■■ 4.09
LSM7-201ENST00000252622 MAGI3Q5TCQ9 1506 aa40.57■■■■■ 4.08
LSM7-201ENST00000252622 ABCA9Q8IUA7 1624 aa40.56■■■■■ 4.08
LSM7-201ENST00000252622 PLEKHD1A6NEE1 506 aa40.54■■■■■ 4.08
LSM7-201ENST00000252622 CASKIN1Q8WXD9 1431 aa40.52■■■■■ 4.08
LSM7-201ENST00000252622 PCF11O94913 1555 aaKnown RBP40.51■■■■■ 4.08
LSM7-201ENST00000252622 ATP1B4Q9UN42 357 aaPredicted RBP40.5■■■■■ 4.07
LSM7-201ENST00000252622 CEP162Q5TB80 1403 aa40.49■■■■■ 4.07
LSM7-201ENST00000252622 FYCO1Q9BQS8 1478 aa40.43■■■■■ 4.06
LSM7-201ENST00000252622 LRRIQ1Q96JM4 1722 aa40.41■■■■■ 4.06
LSM7-201ENST00000252622 LOC105371045A0A1W2PR82 267 aa40.4■■■■■ 4.06
LSM7-201ENST00000252622 CCDC18Q5T9S5 1454 aa40.39■■■■■ 4.06
LSM7-201ENST00000252622 CDK11AQ9UQ88 783 aaPredicted RBP40.38■■■■■ 4.05
LSM7-201ENST00000252622 COL17A1Q9UMD9 1497 aaPredicted RBP40.35■■■■■ 4.05
LSM7-201ENST00000252622 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP40.33■■■■■ 4.057e-7■■□□□ 14.3
LSM7-201ENST00000252622 TROQ12816 1431 aaPredicted RBP40.29■■■■■ 4.04
LSM7-201ENST00000252622 TTC37Q6PGP7 1564 aa40.28■■■■■ 4.04
LSM7-201ENST00000252622 PHLDB1Q86UU1 1377 aa40.25■■■■■ 4.03
LSM7-201ENST00000252622 NEO1Q92859 1461 aa40.25■■■■■ 4.03
LSM7-201ENST00000252622 ARAP3Q8WWN8 1544 aa40.21■■■■■ 4.03
LSM7-201ENST00000252622 KIF14Q15058 1648 aa40.21■■■■■ 4.03
LSM7-201ENST00000252622 CFAP74Q9C0B2 1584 aa40.13■■■■■ 4.01
LSM7-201ENST00000252622 FANCAO15360 1455 aa40.11■■■■■ 4.01
LSM7-201ENST00000252622 PLCH2O75038 1416 aa40.1■■■■■ 4.01
LSM7-201ENST00000252622 MYO5CQ9NQX4 1742 aa40.06■■■■■ 4
LSM7-201ENST00000252622 AKNAQ7Z591 1439 aa40.04■■■■■ 4
LSM7-201ENST00000252622 VPS8Q8N3P4 1428 aa40.03■■■■■ 4
LSM7-201ENST00000252622 FRMPD1Q5SYB0 1578 aa39.94■■■■□ 3.98
LSM7-201ENST00000252622 DENND4BO75064 1496 aaPredicted RBP39.94■■■■□ 3.98
LSM7-201ENST00000252622 RAPGEF3O95398 923 aa39.91■■■■□ 3.98
LSM7-201ENST00000252622 EFCAB2Q5VUJ9 269 aa39.91■■■■□ 3.98
LSM7-201ENST00000252622 MTUS2Q5JR59 1369 aa39.91■■■■□ 3.98
LSM7-201ENST00000252622 PREX2Q70Z35 1606 aa39.9■■■■□ 3.98
LSM7-201ENST00000252622 ARHGAP5Q13017 1502 aa39.9■■■■□ 3.98
LSM7-201ENST00000252622 ADGRL1O94910 1474 aa39.89■■■■□ 3.98
LSM7-201ENST00000252622 EHBP1L1Q8N3D4 1523 aa39.89■■■■□ 3.98
Retrieved 100 of 20,778 RNA–protein pairs in 145.6 ms