RNA–Protein interactions for RNA: ENST00000250489.8

TMEM55B-201, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-201ENST00000250489 TIAM1Q13009 1591 aa37.95■■■■□ 3.67
TMEM55B-201ENST00000250489 FHAD1B1AJZ9 1412 aa37.93■■■■□ 3.66
TMEM55B-201ENST00000250489 RRBP1Q9P2E9 1410 aaKnown RBP37.93■■■■□ 3.66
TMEM55B-201ENST00000250489 MRC2Q9UBG0 1479 aa37.9■■■■□ 3.66
TMEM55B-201ENST00000250489 PCF11O94913 1555 aaKnown RBP37.85■■■■□ 3.65
TMEM55B-201ENST00000250489 FHOD3Q2V2M9 1422 aa37.82■■■■□ 3.65
TMEM55B-201ENST00000250489 P3H3Q8IVL6 736 aa37.8■■■■□ 3.64
TMEM55B-201ENST00000250489 CFAP43Q8NDM7 1665 aa37.79■■■■□ 3.64
TMEM55B-201ENST00000250489 LRRC9Q6ZRR7 1453 aa37.76■■■■□ 3.64
TMEM55B-201ENST00000250489 PBRM1Q86U86 1689 aa37.74■■■■□ 3.63
TMEM55B-201ENST00000250489 CCNB3Q8WWL7 1395 aa37.74■■■■□ 3.63
TMEM55B-201ENST00000250489 AQRO60306 1485 aaKnown RBP eCLIP37.73■■■■□ 3.634e-8■■■■■ 34.1
TMEM55B-201ENST00000250489 FYCO1Q9BQS8 1478 aa37.73■■■■□ 3.63
TMEM55B-201ENST00000250489 CASKIN1Q8WXD9 1431 aa37.7■■■■□ 3.62
TMEM55B-201ENST00000250489 SAMD9Q5K651 1589 aa37.69■■■■□ 3.62
TMEM55B-201ENST00000250489 WDR62O43379 1518 aa37.66■■■■□ 3.62
TMEM55B-201ENST00000250489 FMN1Q68DA7 1419 aa37.63■■■■□ 3.61
TMEM55B-201ENST00000250489 ADAMTS12P58397 1594 aa37.59■■■■□ 3.61
TMEM55B-201ENST00000250489 IFT140Q96RY7 1462 aa37.58■■■■□ 3.61
TMEM55B-201ENST00000250489 SNAPC4Q5SXM2 1469 aa37.56■■■■□ 3.6
TMEM55B-201ENST00000250489 GRIN2BQ13224 1484 aa37.54■■■■□ 3.6
TMEM55B-201ENST00000250489 ATP1B4Q9UN42 357 aaPredicted RBP37.53■■■■□ 3.6
TMEM55B-201ENST00000250489 PHLDB1Q86UU1 1377 aa37.52■■■■□ 3.6
TMEM55B-201ENST00000250489 DHX57Q6P158 1386 aaKnown RBP37.47■■■■□ 3.59
TMEM55B-201ENST00000250489 ZNF608Q9ULD9 1512 aaPredicted RBP37.46■■■■□ 3.59
TMEM55B-201ENST00000250489 CLSPNQ9HAW4 1339 aa37.43■■■■□ 3.58
TMEM55B-201ENST00000250489 ERCC6Q03468 1493 aa37.39■■■■□ 3.58
TMEM55B-201ENST00000250489 IQGAP2Q13576 1575 aa37.39■■■■□ 3.58
TMEM55B-201ENST00000250489 THOC2Q8NI27 1593 aaKnown RBP37.37■■■■□ 3.57
TMEM55B-201ENST00000250489 ITGAEP38570 1179 aa37.35■■■■□ 3.57
TMEM55B-201ENST00000250489 LRRIQ1Q96JM4 1722 aa37.35■■■■□ 3.57
TMEM55B-201ENST00000250489 EIF4G3O43432 1585 aaKnown RBP37.3■■■■□ 3.56
TMEM55B-201ENST00000250489 ZNF316A6NFI3 1004 aaPredicted RBP37.26■■■■□ 3.55
TMEM55B-201ENST00000250489 FAM50AQ14320 339 aaKnown RBP37.22■■■■□ 3.55
TMEM55B-201ENST00000250489 MTUS2Q5JR59 1369 aa37.22■■■■□ 3.55
TMEM55B-201ENST00000250489 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP37.22■■■■□ 3.55
TMEM55B-201ENST00000250489 DIEXFQ68CQ4 756 aaKnown RBP37.22■■■■□ 3.55
TMEM55B-201ENST00000250489 RAB3GAP2Q9H2M9 1393 aa37.22■■■■□ 3.55
TMEM55B-201ENST00000250489 UGGT2Q9NYU1 1516 aa37.21■■■■□ 3.55
TMEM55B-201ENST00000250489 SETD5Q9C0A6 1442 aa37.17■■■■□ 3.54
TMEM55B-201ENST00000250489 FGD6Q6ZV73 1430 aa37.15■■■■□ 3.54
TMEM55B-201ENST00000250489 EHBP1L1Q8N3D4 1523 aa37.14■■■■□ 3.54
TMEM55B-201ENST00000250489 CCDC18Q5T9S5 1454 aa37.14■■■■□ 3.54
TMEM55B-201ENST00000250489 HECW1Q76N89 1606 aa37.14■■■■□ 3.54
TMEM55B-201ENST00000250489 KIAA0586Q9BVV6 1533 aa37.13■■■■□ 3.54
TMEM55B-201ENST00000250489 GRIN2AQ12879 1464 aa37.13■■■■□ 3.53
TMEM55B-201ENST00000250489 SUPT6HQ7KZ85 1726 aaKnown RBP37.09■■■■□ 3.53
TMEM55B-201ENST00000250489 NCOA2Q15596 1464 aa37.09■■■■□ 3.53
TMEM55B-201ENST00000250489 MAGI1Q96QZ7 1491 aaPredicted RBP37.08■■■■□ 3.53
TMEM55B-201ENST00000250489 MAGI3Q5TCQ9 1506 aa37.04■■■■□ 3.52
TMEM55B-201ENST00000250489 KIAA0556O60303 1618 aa37.02■■■■□ 3.52
TMEM55B-201ENST00000250489 MYOM3Q5VTT5 1437 aa37.01■■■■□ 3.52
TMEM55B-201ENST00000250489 ARHGEF11O15085 1522 aa37■■■■□ 3.51
TMEM55B-201ENST00000250489 EPRSP07814 1512 aaKnown RBP37■■■■□ 3.51
TMEM55B-201ENST00000250489 DISP1Q96F81 1524 aa37■■■■□ 3.51
TMEM55B-201ENST00000250489 MAPKBP1O60336 1514 aa36.99■■■■□ 3.51
TMEM55B-201ENST00000250489 SYNJ2O15056 1496 aa36.97■■■■□ 3.51
TMEM55B-201ENST00000250489 CDK13Q14004 1512 aaKnown RBP36.9■■■■□ 3.5
TMEM55B-201ENST00000250489 CEP170Q5SW79 1584 aa36.9■■■■□ 3.5
TMEM55B-201ENST00000250489 CHMP7Q8WUX9 453 aaPredicted RBP36.87■■■■□ 3.49
TMEM55B-201ENST00000250489 PTPN23Q9H3S7 1636 aa36.85■■■■□ 3.49
TMEM55B-201ENST00000250489 PTPRKQ15262 1439 aa36.83■■■■□ 3.49
TMEM55B-201ENST00000250489 NUP160Q12769 1436 aa36.78■■■■□ 3.48
TMEM55B-201ENST00000250489 TCOF1Q13428 1488 aaKnown RBP36.78■■■■□ 3.48
TMEM55B-201ENST00000250489 RAPGEF6Q8TEU7 1601 aa36.78■■■■□ 3.48
TMEM55B-201ENST00000250489 HFM1A2PYH4 1435 aa36.77■■■■□ 3.48
TMEM55B-201ENST00000250489 NUP153P49790 1475 aaKnown RBP36.75■■■■□ 3.47
TMEM55B-201ENST00000250489 FBLN2P98095 1184 aa36.71■■■■□ 3.47
TMEM55B-201ENST00000250489 ARID3CA6NKF2 412 aa36.69■■■■□ 3.46
TMEM55B-201ENST00000250489 MIA2Q96PC5 1412 aa36.68■■■■□ 3.46
TMEM55B-201ENST00000250489 NAIPQ13075 1403 aa36.66■■■■□ 3.46
TMEM55B-201ENST00000250489 CARMIL2Q6F5E8 1435 aa36.61■■■■□ 3.45
TMEM55B-201ENST00000250489 JPH4Q96JJ6 628 aa36.58■■■■□ 3.45
TMEM55B-201ENST00000250489 UACAQ9BZF9 1416 aa36.57■■■■□ 3.45
TMEM55B-201ENST00000250489 SIN3AQ96ST3 1273 aa36.56■■■■□ 3.44
TMEM55B-201ENST00000250489 PLB1Q6P1J6 1458 aa36.54■■■■□ 3.44
TMEM55B-201ENST00000250489 GCC2Q8IWJ2 1684 aa36.53■■■■□ 3.44
TMEM55B-201ENST00000250489 CDK11AQ9UQ88 783 aaPredicted RBP36.52■■■■□ 3.44
TMEM55B-201ENST00000250489 AKNAQ7Z591 1439 aa36.52■■■■□ 3.44
TMEM55B-201ENST00000250489 MIER1Q8N108 512 aa36.5■■■■□ 3.43
TMEM55B-201ENST00000250489 TIMELESSQ9UNS1 1208 aa36.5■■■■□ 3.43
TMEM55B-201ENST00000250489 NEUROD1Q13562 356 aa36.48■■■■□ 3.43
TMEM55B-201ENST00000250489 TROQ12816 1431 aaPredicted RBP36.46■■■■□ 3.43
TMEM55B-201ENST00000250489 PRG4Q92954 1404 aaPredicted RBP36.41■■■■□ 3.42
TMEM55B-201ENST00000250489 CHIC2Q9UKJ5 165 aa36.41■■■■□ 3.42
TMEM55B-201ENST00000250489 RRP7BPQ9NSQ0 103 aa36.4■■■■□ 3.42
TMEM55B-201ENST00000250489 ABCA8O94911 1581 aa36.39■■■■□ 3.42
TMEM55B-201ENST00000250489 ADCY10Q96PN6 1610 aa36.38■■■■□ 3.41
TMEM55B-201ENST00000250489 ACIN1Q9UKV3 1341 aaKnown RBP36.37■■■■□ 3.41
TMEM55B-201ENST00000250489 DNMT1P26358 1616 aaKnown RBP36.36■■■■□ 3.41
TMEM55B-201ENST00000250489 DAPK1P53355 1430 aa36.35■■■■□ 3.41
TMEM55B-201ENST00000250489 CENPBP07199 599 aaPredicted RBP36.34■■■■□ 3.41
TMEM55B-201ENST00000250489 KDM6BO15054 1643 aa36.32■■■■□ 3.41
TMEM55B-201ENST00000250489 ITSN2Q9NZM3 1697 aa36.31■■■■□ 3.4
TMEM55B-201ENST00000250489 CHD1O14646 1710 aa36.31■■■■□ 3.4
TMEM55B-201ENST00000250489 KIF14Q15058 1648 aa36.3■■■■□ 3.4
TMEM55B-201ENST00000250489 ABCC5O15440 1437 aa36.3■■■■□ 3.4
TMEM55B-201ENST00000250489 SCAF1Q9H7N4 1312 aaKnown RBP36.3■■■■□ 3.4
TMEM55B-201ENST00000250489 ROCK1Q13464 1354 aa36.29■■■■□ 3.4
TMEM55B-201ENST00000250489 PPP1R15AO75807 674 aaPredicted RBP36.27■■■■□ 3.4
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms