RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 CUL7Q14999 1698 aa21.68■■□□□ 1.06
SLIRP-201ENST00000238688 EEA1Q15075 1411 aa21.66■■□□□ 1.06
SLIRP-201ENST00000238688 JPH4Q96JJ6 628 aa21.66■■□□□ 1.06
SLIRP-201ENST00000238688 PRG4Q92954 1404 aaPredicted RBP21.65■■□□□ 1.06
SLIRP-201ENST00000238688 KIAA0586Q9BVV6 1533 aa21.59■■□□□ 1.05
SLIRP-201ENST00000238688 CARMIL1Q5VZK9 1371 aa21.58■■□□□ 1.04
SLIRP-201ENST00000238688 KIF13AQ9H1H9 1805 aa21.45■■□□□ 1.03
SLIRP-201ENST00000238688 ADCY10Q96PN6 1610 aa21.44■■□□□ 1.02
SLIRP-201ENST00000238688 IQGAP2Q13576 1575 aa21.4■■□□□ 1.02
SLIRP-201ENST00000238688 RAPGEF2Q9Y4G8 1499 aa21.39■■□□□ 1.02
SLIRP-201ENST00000238688 MAPKBP1O60336 1514 aa21.34■■□□□ 1.01
SLIRP-201ENST00000238688 DISP1Q96F81 1524 aa21.34■■□□□ 1.01
SLIRP-201ENST00000238688 PTPRGP23470 1445 aa21.32■■□□□ 1
SLIRP-201ENST00000238688 TNIKQ9UKE5 1360 aa21.31■■□□□ 1
SLIRP-201ENST00000238688 UGGT2Q9NYU1 1516 aa21.3■■□□□ 1
SLIRP-201ENST00000238688 ABCC10Q5T3U5 1492 aa21.3■■□□□ 1
SLIRP-201ENST00000238688 CARMIL2Q6F5E8 1435 aa21.29■■□□□ 1
SLIRP-201ENST00000238688 KIF21BO75037 1637 aa21.29■■□□□ 1
SLIRP-201ENST00000238688 CTTNBP2Q8WZ74 1663 aa21.28■■□□□ 1
SLIRP-201ENST00000238688 DIP2BQ9P265 1576 aa21.27■■□□□ 1
SLIRP-201ENST00000238688 PRXQ9BXM0 1461 aa21.27■■□□□ 1
SLIRP-201ENST00000238688 NPM1P06748 294 aaKnown RBP eCLIP21.27■■□□□ 1
SLIRP-201ENST00000238688 CSRNP3Q8WYN3 585 aa21.26■□□□□ 0.99
SLIRP-201ENST00000238688 KIAA0556O60303 1618 aa21.24■□□□□ 0.99
SLIRP-201ENST00000238688 TTBK1Q5TCY1 1321 aaPredicted RBP21.23■□□□□ 0.99
SLIRP-201ENST00000238688 FAM69CQ0P6D2 419 aa21.22■□□□□ 0.99
SLIRP-201ENST00000238688 UHRF1BP1LA0JNW5 1464 aa21.21■□□□□ 0.99
SLIRP-201ENST00000238688 ABCC2Q92887 1545 aa21.21■□□□□ 0.99
SLIRP-201ENST00000238688 GOLGA3Q08378 1498 aa21.2■□□□□ 0.98
SLIRP-201ENST00000238688 FAM9AQ8IZU1 332 aaPredicted RBP21.19■□□□□ 0.98
SLIRP-201ENST00000238688 UACAQ9BZF9 1416 aa21.19■□□□□ 0.98
SLIRP-201ENST00000238688 LOC105371045A0A1W2PR82 267 aa21.17■□□□□ 0.98
SLIRP-201ENST00000238688 TSPOAP1O95153 1857 aa21.15■□□□□ 0.98
SLIRP-201ENST00000238688 KDM5BQ9UGL1 1544 aa21.13■□□□□ 0.97
SLIRP-201ENST00000238688 ASXL2Q76L83 1435 aa21.12■□□□□ 0.97
SLIRP-201ENST00000238688 ZCCHC11Q5TAX3 1644 aaKnown RBP21.09■□□□□ 0.97
SLIRP-201ENST00000238688 PLB1Q6P1J6 1458 aa21.08■□□□□ 0.97
SLIRP-201ENST00000238688 PPRC1Q5VV67 1664 aaKnown RBP21.08■□□□□ 0.96
SLIRP-201ENST00000238688 GLI2P10070 1586 aa21.07■□□□□ 0.96
SLIRP-201ENST00000238688 ABCA8O94911 1581 aa21.06■□□□□ 0.96
SLIRP-201ENST00000238688 EPRSP07814 1512 aaKnown RBP21.01■□□□□ 0.95
SLIRP-201ENST00000238688 KDM6BO15054 1643 aa21■□□□□ 0.95
SLIRP-201ENST00000238688 MAP3K4Q9Y6R4 1608 aa20.99■□□□□ 0.95
SLIRP-201ENST00000238688 SAMD9Q5K651 1589 aa20.98■□□□□ 0.95
SLIRP-201ENST00000238688 WDR7Q9Y4E6 1490 aa20.94■□□□□ 0.94
SLIRP-201ENST00000238688 P3H3Q8IVL6 736 aa20.93■□□□□ 0.94
SLIRP-201ENST00000238688 CEP162Q5TB80 1403 aa20.93■□□□□ 0.94
SLIRP-201ENST00000238688 UBTFP17480 764 aaKnown RBP20.9■□□□□ 0.94
SLIRP-201ENST00000238688 COL17A1Q9UMD9 1497 aaPredicted RBP20.89■□□□□ 0.94
SLIRP-201ENST00000238688 ATP10BO94823 1461 aa20.87■□□□□ 0.93
SLIRP-201ENST00000238688 AEBP2Q6ZN18 517 aaPredicted RBP20.85■□□□□ 0.93
SLIRP-201ENST00000238688 CFAP43Q8NDM7 1665 aa20.84■□□□□ 0.93
SLIRP-201ENST00000238688 RAPGEF6Q8TEU7 1601 aa20.83■□□□□ 0.93
SLIRP-201ENST00000238688 TEX14Q8IWB6 1497 aa20.81■□□□□ 0.92
SLIRP-201ENST00000238688 FHOD3Q2V2M9 1422 aa20.8■□□□□ 0.92
SLIRP-201ENST00000238688 ARID3CA6NKF2 412 aa20.8■□□□□ 0.92
SLIRP-201ENST00000238688 KCNH8Q96L42 1107 aa20.8■□□□□ 0.92
SLIRP-201ENST00000238688 MAGI3Q5TCQ9 1506 aa20.79■□□□□ 0.92
SLIRP-201ENST00000238688 CLIP1P30622 1438 aa20.78■□□□□ 0.92
SLIRP-201ENST00000238688 CD109Q6YHK3 1445 aa20.78■□□□□ 0.92
SLIRP-201ENST00000238688 NUP153P49790 1475 aaKnown RBP20.77■□□□□ 0.92
SLIRP-201ENST00000238688 RANGAP1P46060 587 aaPredicted RBP20.77■□□□□ 0.92
SLIRP-201ENST00000238688 KDM4FA0A1W2PPD8 638 aa20.76■□□□□ 0.91
SLIRP-201ENST00000238688 EFCAB5A4FU69 1503 aa20.74■□□□□ 0.91
SLIRP-201ENST00000238688 ABCA9Q8IUA7 1624 aa20.72■□□□□ 0.91
SLIRP-201ENST00000238688 EHMT2Q96KQ7 1210 aa20.69■□□□□ 0.9
SLIRP-201ENST00000238688 VPS8Q8N3P4 1428 aa20.67■□□□□ 0.9
SLIRP-201ENST00000238688 ARHGAP35Q9NRY4 1499 aa20.64■□□□□ 0.89
SLIRP-201ENST00000238688 ARAP3Q8WWN8 1544 aa20.63■□□□□ 0.89
SLIRP-201ENST00000238688 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.61■□□□□ 0.89
SLIRP-201ENST00000238688 HNRNPUL2Q1KMD3 747 aaKnown RBP20.61■□□□□ 0.89
SLIRP-201ENST00000238688 ADGRL1O94910 1474 aa20.6■□□□□ 0.89
SLIRP-201ENST00000238688 CDK13Q14004 1512 aaKnown RBP20.58■□□□□ 0.88
SLIRP-201ENST00000238688 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.55■□□□□ 0.88
SLIRP-201ENST00000238688 PLEKHD1A6NEE1 506 aa20.55■□□□□ 0.88
SLIRP-201ENST00000238688 NEO1Q92859 1461 aa20.55■□□□□ 0.88
SLIRP-201ENST00000238688 PHLDB1Q86UU1 1377 aa20.54■□□□□ 0.88
SLIRP-201ENST00000238688 LRRIQ1Q96JM4 1722 aa20.53■□□□□ 0.88
SLIRP-201ENST00000238688 TRIM26Q12899 539 aaPredicted RBP20.53■□□□□ 0.88
SLIRP-201ENST00000238688 TTC37Q6PGP7 1564 aa20.53■□□□□ 0.88
SLIRP-201ENST00000238688 FMN1Q68DA7 1419 aa20.53■□□□□ 0.88
SLIRP-201ENST00000238688 FRMPD1Q5SYB0 1578 aa20.52■□□□□ 0.88
SLIRP-201ENST00000238688 HECW1Q76N89 1606 aa20.51■□□□□ 0.87
SLIRP-201ENST00000238688 RAPGEF3O95398 923 aa20.48■□□□□ 0.87
SLIRP-201ENST00000238688 MAP3K1Q13233 1512 aa20.48■□□□□ 0.87
SLIRP-201ENST00000238688 RICTORQ6R327 1708 aa20.46■□□□□ 0.87
SLIRP-201ENST00000238688 AKNAQ7Z591 1439 aa20.44■□□□□ 0.86
SLIRP-201ENST00000238688 FANCAO15360 1455 aa20.43■□□□□ 0.86
SLIRP-201ENST00000238688 APLP2Q06481 763 aa20.42■□□□□ 0.86
SLIRP-201ENST00000238688 KIF14Q15058 1648 aa20.42■□□□□ 0.86
SLIRP-201ENST00000238688 ATP1B4Q9UN42 357 aaPredicted RBP20.41■□□□□ 0.86
SLIRP-201ENST00000238688 CFAP74Q9C0B2 1584 aa20.41■□□□□ 0.86
SLIRP-201ENST00000238688 PCF11O94913 1555 aaKnown RBP20.39■□□□□ 0.85
SLIRP-201ENST00000238688 PLCH2O75038 1416 aa20.39■□□□□ 0.85
SLIRP-201ENST00000238688 DENND4BO75064 1496 aaPredicted RBP20.38■□□□□ 0.85
SLIRP-201ENST00000238688 MYO5CQ9NQX4 1742 aa20.38■□□□□ 0.85
SLIRP-201ENST00000238688 TROQ12816 1431 aaPredicted RBP20.37■□□□□ 0.85
SLIRP-201ENST00000238688 CASKIN1Q8WXD9 1431 aa20.37■□□□□ 0.85
SLIRP-201ENST00000238688 FYCO1Q9BQS8 1478 aa20.37■□□□□ 0.85
SLIRP-201ENST00000238688 ADAMTSL3P82987 1691 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms