RNA–Protein interactions for RNA: ENST00000230461.10

TMEM30A-201, Transcript of transmembrane protein 30A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM30A, Length 4,594 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM30A-201ENST00000230461 ESF1Q9H501 851 aaKnown RBP22.04■■□□□ 1.12
TMEM30A-201ENST00000230461 CCNB3Q8WWL7 1395 aa22.02■■□□□ 1.12
TMEM30A-201ENST00000230461 KANK4Q5T7N3 995 aaPredicted RBP22■■□□□ 1.11
TMEM30A-201ENST00000230461 CHGAP10645 457 aaKnown RBP21.99■■□□□ 1.11
TMEM30A-201ENST00000230461 CFTRP13569 1480 aa21.98■■□□□ 1.11
TMEM30A-201ENST00000230461 CARMIL2Q6F5E8 1435 aa21.98■■□□□ 1.11
TMEM30A-201ENST00000230461 FGD5Q6ZNL6 1462 aa21.98■■□□□ 1.11
TMEM30A-201ENST00000230461 FMN1Q68DA7 1419 aa21.98■■□□□ 1.11
TMEM30A-201ENST00000230461 ACIN1Q9UKV3 1341 aaKnown RBP21.97■■□□□ 1.11
TMEM30A-201ENST00000230461 HMGXB3Q12766 1538 aa21.97■■□□□ 1.11
TMEM30A-201ENST00000230461 BCANQ96GW7 911 aa21.94■■□□□ 1.1
TMEM30A-201ENST00000230461 IGF1RP08069 1367 aa21.93■■□□□ 1.1
TMEM30A-201ENST00000230461 CC2D2AQ9P2K1 1620 aa21.93■■□□□ 1.1
TMEM30A-201ENST00000230461 STAG3Q9UJ98 1225 aa21.89■■□□□ 1.09
TMEM30A-201ENST00000230461 RAD54L2Q9Y4B4 1467 aa21.88■■□□□ 1.09
TMEM30A-201ENST00000230461 ERICH6Q7L0X2 663 aa21.88■■□□□ 1.09
TMEM30A-201ENST00000230461 FHOD3Q2V2M9 1422 aa21.88■■□□□ 1.09
TMEM30A-201ENST00000230461 DDX10Q13206 875 aaKnown RBP21.86■■□□□ 1.09
TMEM30A-201ENST00000230461 KDM2AQ9Y2K7 1162 aa21.85■■□□□ 1.09
TMEM30A-201ENST00000230461 JPH4Q96JJ6 628 aa21.85■■□□□ 1.09
TMEM30A-201ENST00000230461 GAPVD1Q14C86 1478 aa21.84■■□□□ 1.09
TMEM30A-201ENST00000230461 ARHGAP35Q9NRY4 1499 aa21.83■■□□□ 1.09
TMEM30A-201ENST00000230461 NESP48681 1621 aa21.81■■□□□ 1.08
TMEM30A-201ENST00000230461 CLSPNQ9HAW4 1339 aa21.8■■□□□ 1.08
TMEM30A-201ENST00000230461 SYNJ1O43426 1573 aa21.75■■□□□ 1.07
TMEM30A-201ENST00000230461 EIF4G2P78344 907 aaKnown RBP eCLIP21.73■■□□□ 1.07
TMEM30A-201ENST00000230461 PLPPR3Q6T4P5 718 aa21.72■■□□□ 1.07
TMEM30A-201ENST00000230461 SIN3AQ96ST3 1273 aa21.72■■□□□ 1.07
TMEM30A-201ENST00000230461 HIRIP3Q9BW71 556 aaPredicted RBP21.71■■□□□ 1.07
TMEM30A-201ENST00000230461 SETD5Q9C0A6 1442 aa21.69■■□□□ 1.06
TMEM30A-201ENST00000230461 RGL3Q3MIN7 710 aa21.69■■□□□ 1.06
TMEM30A-201ENST00000230461 AQRO60306 1485 aaKnown RBP eCLIP21.68■■□□□ 1.061e-6■■■■■ 30.6
TMEM30A-201ENST00000230461 UNC13AQ9UPW8 1703 aa21.67■■□□□ 1.06
TMEM30A-201ENST00000230461 PEG3Q9GZU2 1588 aa21.65■■□□□ 1.06
TMEM30A-201ENST00000230461 GTF3C3Q9Y5Q9 886 aa21.64■■□□□ 1.06
TMEM30A-201ENST00000230461 CUX1P39880 1505 aa21.63■■□□□ 1.05
TMEM30A-201ENST00000230461 TOP2BQ02880 1626 aa21.63■■□□□ 1.05
TMEM30A-201ENST00000230461 TOPBP1Q92547 1522 aa21.62■■□□□ 1.05
TMEM30A-201ENST00000230461 DNAJC5BQ9UF47 199 aa21.61■■□□□ 1.05
TMEM30A-201ENST00000230461 EFCAB2Q5VUJ9 269 aa21.6■■□□□ 1.05
TMEM30A-201ENST00000230461 MRC2Q9UBG0 1479 aa21.59■■□□□ 1.05
TMEM30A-201ENST00000230461 CCDC18Q5T9S5 1454 aa21.58■■□□□ 1.04
TMEM30A-201ENST00000230461 POLA1P09884 1462 aaPredicted RBP21.57■■□□□ 1.04
TMEM30A-201ENST00000230461 TIMELESSQ9UNS1 1208 aa21.57■■□□□ 1.04
TMEM30A-201ENST00000230461 PTPRGP23470 1445 aa21.57■■□□□ 1.04
TMEM30A-201ENST00000230461 GRIN2BQ13224 1484 aa21.57■■□□□ 1.04
TMEM30A-201ENST00000230461 RAB3GAP2Q9H2M9 1393 aa21.57■■□□□ 1.04
TMEM30A-201ENST00000230461 MIER1Q8N108 512 aa21.56■■□□□ 1.04
TMEM30A-201ENST00000230461 NEFMP07197 916 aa21.55■■□□□ 1.04
TMEM30A-201ENST00000230461 KIF21BO75037 1637 aa21.54■■□□□ 1.04
TMEM30A-201ENST00000230461 ERICH3Q5RHP9 1530 aa21.54■■□□□ 1.04
TMEM30A-201ENST00000230461 PRXQ9BXM0 1461 aa21.53■■□□□ 1.04
TMEM30A-201ENST00000230461 FAM9BQ8IZU0 186 aa21.51■■□□□ 1.03
TMEM30A-201ENST00000230461 ARID4BQ4LE39 1312 aaPredicted RBP21.51■■□□□ 1.03
TMEM30A-201ENST00000230461 HNRNPUQ00839 825 aaKnown RBP eCLIP21.5■■□□□ 1.03
TMEM30A-201ENST00000230461 TMC1Q8TDI8 760 aa21.5■■□□□ 1.03
TMEM30A-201ENST00000230461 CARD11Q9BXL7 1154 aa21.49■■□□□ 1.03
TMEM30A-201ENST00000230461 ANKRD30AQ9BXX3 1397 aa21.49■■□□□ 1.03
TMEM30A-201ENST00000230461 IFT140Q96RY7 1462 aa21.48■■□□□ 1.03
TMEM30A-201ENST00000230461 DNMBPQ6XZF7 1577 aa21.48■■□□□ 1.03
TMEM30A-201ENST00000230461 PKD2Q13563 968 aa21.46■■□□□ 1.03
TMEM30A-201ENST00000230461 OSCARQ8IYS5 282 aa21.46■■□□□ 1.03
TMEM30A-201ENST00000230461 PPP1R15AO75807 674 aaPredicted RBP21.46■■□□□ 1.03
TMEM30A-201ENST00000230461 RSPH4AQ5TD94 716 aa21.46■■□□□ 1.03
TMEM30A-201ENST00000230461 MRS2Q9HD23 443 aa21.46■■□□□ 1.03
TMEM30A-201ENST00000230461 HNRNPMP52272 730 aaKnown RBP eCLIP21.45■■□□□ 1.02
TMEM30A-201ENST00000230461 LAMC3Q9Y6N6 1575 aa21.45■■□□□ 1.02
TMEM30A-201ENST00000230461 KANK1Q14678 1352 aa21.44■■□□□ 1.02
TMEM30A-201ENST00000230461 MPHOSPH9Q99550 1183 aa21.44■■□□□ 1.02
TMEM30A-201ENST00000230461 SENP3Q9H4L4 574 aaPredicted RBP21.43■■□□□ 1.02
TMEM30A-201ENST00000230461 DAXXQ9UER7 740 aaPredicted RBP21.41■■□□□ 1.02
TMEM30A-201ENST00000230461 FOXD1Q16676 465 aa21.41■■□□□ 1.02
TMEM30A-201ENST00000230461 NUP155O75694 1391 aa21.41■■□□□ 1.02
TMEM30A-201ENST00000230461 DCAF11Q8TEB1 546 aa21.4■■□□□ 1.02
TMEM30A-201ENST00000230461 ARAP1Q96P48 1450 aa21.39■■□□□ 1.02
TMEM30A-201ENST00000230461 GGT6Q6P531 493 aa21.37■■□□□ 1.01
TMEM30A-201ENST00000230461 CDCA8Q53HL2 280 aa21.36■■□□□ 1.01
TMEM30A-201ENST00000230461 ABCA10Q8WWZ4 1543 aa21.35■■□□□ 1.01
TMEM30A-201ENST00000230461 TRHP20396 242 aaPredicted RBP21.35■■□□□ 1.01
TMEM30A-201ENST00000230461 CASKIN1Q8WXD9 1431 aa21.35■■□□□ 1.01
TMEM30A-201ENST00000230461 CANXP27824 592 aaKnown RBP21.34■■□□□ 1.01
TMEM30A-201ENST00000230461 SPAG9O60271 1321 aaKnown RBP21.34■■□□□ 1.01
TMEM30A-201ENST00000230461 SALL2Q9Y467 1007 aaPredicted RBP21.32■■□□□ 1
TMEM30A-201ENST00000230461 WDR43Q15061 677 aaKnown RBP eCLIP21.3■■□□□ 1
TMEM30A-201ENST00000230461 LRRC9Q6ZRR7 1453 aa21.29■■□□□ 1
TMEM30A-201ENST00000230461 MLECQ14165 292 aa21.29■■□□□ 1
TMEM30A-201ENST00000230461 SLC24A1O60721 1099 aa21.29■■□□□ 1
TMEM30A-201ENST00000230461 KIF3BO15066 747 aa21.29■■□□□ 1
TMEM30A-201ENST00000230461 CYB5RLQ6IPT4 315 aa21.28■■□□□ 1
TMEM30A-201ENST00000230461 PHLDB1Q86UU1 1377 aa21.27■■□□□ 1
TMEM30A-201ENST00000230461 SNAPC4Q5SXM2 1469 aa21.26■□□□□ 0.99
TMEM30A-201ENST00000230461 DHX57Q6P158 1386 aaKnown RBP21.26■□□□□ 0.99
TMEM30A-201ENST00000230461 FGD6Q6ZV73 1430 aa21.25■□□□□ 0.99
TMEM30A-201ENST00000230461 MYOM3Q5VTT5 1437 aa21.24■□□□□ 0.99
TMEM30A-201ENST00000230461 EFCAB5A4FU69 1503 aa21.24■□□□□ 0.99
TMEM30A-201ENST00000230461 KNSTRNQ9Y448 316 aa21.23■□□□□ 0.99
TMEM30A-201ENST00000230461 FYCO1Q9BQS8 1478 aa21.23■□□□□ 0.99
TMEM30A-201ENST00000230461 FKBP8Q14318 412 aa21.22■□□□□ 0.99
TMEM30A-201ENST00000230461 PRG4Q92954 1404 aaPredicted RBP21.21■□□□□ 0.99
TMEM30A-201ENST00000230461 URB2Q14146 1524 aaKnown RBP21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms