RNA–Protein interactions for RNA: ENST00000230461.10

TMEM30A-201, Transcript of transmembrane protein 30A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM30A, Length 4,594 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM30A-201ENST00000230461 NISCHQ9Y2I1 1504 aa30.02■■■□□ 2.4
TMEM30A-201ENST00000230461 DCAF8L2P0C7V8 631 aa28.63■■■□□ 2.17
TMEM30A-201ENST00000230461 SHROOM4Q9ULL8 1493 aa27.16■■□□□ 1.94
TMEM30A-201ENST00000230461 SUPT5HO00267 1087 aaKnown RBP27.08■■□□□ 1.93
TMEM30A-201ENST00000230461 EHMT2Q96KQ7 1210 aa25.54■■□□□ 1.68
TMEM30A-201ENST00000230461 ABCC9O60706 1549 aa25.52■■□□□ 1.68
TMEM30A-201ENST00000230461 FAM9AQ8IZU1 332 aaPredicted RBP25.34■■□□□ 1.65
TMEM30A-201ENST00000230461 TRIM41Q8WV44 630 aa25.24■■□□□ 1.63
TMEM30A-201ENST00000230461 CCDC180Q9P1Z9 1646 aa25.08■■□□□ 1.61
TMEM30A-201ENST00000230461 ZCCHC6Q5VYS8 1495 aaKnown RBP24.95■■□□□ 1.58
TMEM30A-201ENST00000230461 APLP2Q06481 763 aa24.93■■□□□ 1.58
TMEM30A-201ENST00000230461 PABPN1Q86U42 306 aaKnown RBP eCLIP24.92■■□□□ 1.58
TMEM30A-201ENST00000230461 CHIC1Q5VXU3 224 aa24.72■■□□□ 1.55
TMEM30A-201ENST00000230461 UBTFP17480 764 aaKnown RBP24.66■■□□□ 1.54
TMEM30A-201ENST00000230461 RANGAP1P46060 587 aaPredicted RBP24.65■■□□□ 1.54
TMEM30A-201ENST00000230461 TTBK1Q5TCY1 1321 aaPredicted RBP24.56■■□□□ 1.52
TMEM30A-201ENST00000230461 PCGF6Q9BYE7 350 aa24.55■■□□□ 1.52
TMEM30A-201ENST00000230461 SCRIBQ14160 1630 aa24.46■■□□□ 1.51
TMEM30A-201ENST00000230461 LOC105371045A0A1W2PR82 267 aa24.31■■□□□ 1.48
TMEM30A-201ENST00000230461 ATP1B4Q9UN42 357 aaPredicted RBP24.3■■□□□ 1.48
TMEM30A-201ENST00000230461 RB1CC1Q8TDY2 1594 aa24.19■■□□□ 1.46
TMEM30A-201ENST00000230461 NACADO15069 1562 aa24.14■■□□□ 1.46
TMEM30A-201ENST00000230461 DCAF1Q9Y4B6 1507 aa24.07■■□□□ 1.44
TMEM30A-201ENST00000230461 PPARGC1BQ86YN6 1023 aaKnown RBP24.06■■□□□ 1.44
TMEM30A-201ENST00000230461 CCER1Q8TC90 406 aaPredicted RBP23.97■■□□□ 1.43
TMEM30A-201ENST00000230461 TRIM26Q12899 539 aaPredicted RBP23.93■■□□□ 1.42
TMEM30A-201ENST00000230461 ZEB1P37275 1124 aaPredicted RBP23.93■■□□□ 1.42
TMEM30A-201ENST00000230461 RSF1Q96T23 1441 aaPredicted RBP23.79■■□□□ 1.4
TMEM30A-201ENST00000230461 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.66■■□□□ 1.38
TMEM30A-201ENST00000230461 HNRNPUL2Q1KMD3 747 aaKnown RBP23.66■■□□□ 1.38
TMEM30A-201ENST00000230461 CSRNP3Q8WYN3 585 aa23.66■■□□□ 1.38
TMEM30A-201ENST00000230461 ITGAEP38570 1179 aa23.56■■□□□ 1.36
TMEM30A-201ENST00000230461 MYO15BQ96JP2 1530 aa23.54■■□□□ 1.36
TMEM30A-201ENST00000230461 CECR2Q9BXF3 1484 aa23.51■■□□□ 1.35
TMEM30A-201ENST00000230461 BAZ1AQ9NRL2 1556 aaPredicted RBP23.47■■□□□ 1.35
TMEM30A-201ENST00000230461 BAZ1BQ9UIG0 1483 aaKnown RBP23.38■■□□□ 1.33
TMEM30A-201ENST00000230461 HRCP23327 699 aa23.38■■□□□ 1.33
TMEM30A-201ENST00000230461 FBLN2P98095 1184 aa23.36■■□□□ 1.33
TMEM30A-201ENST00000230461 MROH2BQ7Z745 1585 aa23.22■■□□□ 1.31
TMEM30A-201ENST00000230461 P3H3Q8IVL6 736 aa23.21■■□□□ 1.31
TMEM30A-201ENST00000230461 MYT1LQ9UL68 1186 aa23.21■■□□□ 1.31
TMEM30A-201ENST00000230461 FAM50AQ14320 339 aaKnown RBP23.2■■□□□ 1.31
TMEM30A-201ENST00000230461 WRNQ14191 1432 aaPredicted RBP eCLIP23.13■■□□□ 1.296e-7■■■■■ 33.4
TMEM30A-201ENST00000230461 CENPBP07199 599 aaPredicted RBP23.07■■□□□ 1.28
TMEM30A-201ENST00000230461 PELP1Q8IZL8 1130 aaKnown RBP23.04■■□□□ 1.28
TMEM30A-201ENST00000230461 EEA1Q15075 1411 aa23.03■■□□□ 1.28
TMEM30A-201ENST00000230461 SMARCA2P51531 1590 aa22.95■■□□□ 1.26
TMEM30A-201ENST00000230461 ARID3CA6NKF2 412 aa22.95■■□□□ 1.26
TMEM30A-201ENST00000230461 CCDC88BA6NC98 1476 aa22.95■■□□□ 1.26
TMEM30A-201ENST00000230461 TRIM52Q96A61 297 aa22.88■■□□□ 1.25
TMEM30A-201ENST00000230461 CDK11AQ9UQ88 783 aaPredicted RBP22.86■■□□□ 1.25
TMEM30A-201ENST00000230461 KIF27Q86VH2 1401 aa22.85■■□□□ 1.25
TMEM30A-201ENST00000230461 WIZO95785 1651 aa22.84■■□□□ 1.25
TMEM30A-201ENST00000230461 CLIP1P30622 1438 aa22.84■■□□□ 1.25
TMEM30A-201ENST00000230461 GOLGA3Q08378 1498 aa22.82■■□□□ 1.24
TMEM30A-201ENST00000230461 TOP2AP11388 1531 aaKnown RBP22.81■■□□□ 1.24
TMEM30A-201ENST00000230461 CHMP7Q8WUX9 453 aaPredicted RBP22.79■■□□□ 1.24
TMEM30A-201ENST00000230461 YTHDC1Q96MU7 727 aaKnown RBP22.79■■□□□ 1.24
TMEM30A-201ENST00000230461 ATAD2BQ9ULI0 1458 aa22.77■■□□□ 1.24
TMEM30A-201ENST00000230461 SMARCA4P51532 1647 aa22.75■■□□□ 1.23
TMEM30A-201ENST00000230461 CEP162Q5TB80 1403 aa22.73■■□□□ 1.23
TMEM30A-201ENST00000230461 NEUROD1Q13562 356 aa22.72■■□□□ 1.23
TMEM30A-201ENST00000230461 POLR3GLQ9BT43 218 aa22.72■■□□□ 1.23
TMEM30A-201ENST00000230461 CEP164Q9UPV0 1460 aa22.71■■□□□ 1.23
TMEM30A-201ENST00000230461 TNIKQ9UKE5 1360 aa22.71■■□□□ 1.23
TMEM30A-201ENST00000230461 ZNF777Q9ULD5 760 aaPredicted RBP22.67■■□□□ 1.22
TMEM30A-201ENST00000230461 SOGA1O94964 1423 aa22.66■■□□□ 1.22
TMEM30A-201ENST00000230461 ERCC6Q03468 1493 aa22.64■■□□□ 1.21
TMEM30A-201ENST00000230461 ABCC8Q09428 1581 aa22.63■■□□□ 1.21
TMEM30A-201ENST00000230461 CADPSQ9ULU8 1353 aa22.59■■□□□ 1.21
TMEM30A-201ENST00000230461 CUX2O14529 1486 aa22.58■■□□□ 1.2
TMEM30A-201ENST00000230461 DIEXFQ68CQ4 756 aaKnown RBP22.57■■□□□ 1.2
TMEM30A-201ENST00000230461 PDS5BQ9NTI5 1447 aa22.56■■□□□ 1.2
TMEM30A-201ENST00000230461 MTUS2Q5JR59 1369 aa22.56■■□□□ 1.2
TMEM30A-201ENST00000230461 CARMIL1Q5VZK9 1371 aa22.52■■□□□ 1.2
TMEM30A-201ENST00000230461 NEFLP07196 543 aa22.5■■□□□ 1.19
TMEM30A-201ENST00000230461 NPM1P06748 294 aaKnown RBP eCLIP22.49■■□□□ 1.19
TMEM30A-201ENST00000230461 CNGB1Q14028 1251 aaPredicted RBP22.44■■□□□ 1.18
TMEM30A-201ENST00000230461 ZNF326Q5BKZ1 582 aaKnown RBP22.43■■□□□ 1.18
TMEM30A-201ENST00000230461 CHIC2Q9UKJ5 165 aa22.38■■□□□ 1.17
TMEM30A-201ENST00000230461 ZNF316A6NFI3 1004 aaPredicted RBP22.37■■□□□ 1.17
TMEM30A-201ENST00000230461 NCAPD3P42695 1498 aa22.37■■□□□ 1.17
TMEM30A-201ENST00000230461 TDRD9Q8NDG6 1382 aaKnown RBP22.34■■□□□ 1.17
TMEM30A-201ENST00000230461 EIF4G1Q04637 1599 aaKnown RBP22.32■■□□□ 1.16
TMEM30A-201ENST00000230461 PLEKHD1A6NEE1 506 aa22.31■■□□□ 1.16
TMEM30A-201ENST00000230461 TSPY4P0CV99 314 aa22.3■■□□□ 1.16
TMEM30A-201ENST00000230461 TSPY10P0CW01 314 aa22.3■■□□□ 1.16
TMEM30A-201ENST00000230461 SLC4A1APQ9BWU0 796 aaKnown RBP22.25■■□□□ 1.15
TMEM30A-201ENST00000230461 FHAD1B1AJZ9 1412 aa22.25■■□□□ 1.15
TMEM30A-201ENST00000230461 FANCD2Q9BXW9 1451 aa22.24■■□□□ 1.15
TMEM30A-201ENST00000230461 TONSLQ96HA7 1378 aa22.22■■□□□ 1.15
TMEM30A-201ENST00000230461 KCNH8Q96L42 1107 aa22.19■■□□□ 1.14
TMEM30A-201ENST00000230461 VPS8Q8N3P4 1428 aa22.18■■□□□ 1.14
TMEM30A-201ENST00000230461 ANP32CO43423 234 aa22.15■■□□□ 1.14
TMEM30A-201ENST00000230461 RRP7BPQ9NSQ0 103 aa22.15■■□□□ 1.14
TMEM30A-201ENST00000230461 CFDP1Q9UEE9 299 aaPredicted RBP22.13■■□□□ 1.13
TMEM30A-201ENST00000230461 RUSC2Q8N2Y8 1516 aa22.12■■□□□ 1.13
TMEM30A-201ENST00000230461 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.11■■□□□ 1.134e-7■□□□□ 8.8
TMEM30A-201ENST00000230461 RAPGEF2Q9Y4G8 1499 aa22.1■■□□□ 1.13
TMEM30A-201ENST00000230461 BICRAQ9NZM4 1560 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms