RNA–Protein interactions for RNA: ENST00000226798.8

FRG1-201, Transcript of FSHD region gene 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FRG1, Length 1,074 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRG1-201ENST00000226798 TOP2BQ02880 1626 aa21.04■□□□□ 0.96
FRG1-201ENST00000226798 ADRA2BP18089 450 aa21.04■□□□□ 0.96
FRG1-201ENST00000226798 NUP160Q12769 1436 aa21.04■□□□□ 0.96
FRG1-201ENST00000226798 SHROOM2Q13796 1616 aa21.02■□□□□ 0.96
FRG1-201ENST00000226798 FHAD1B1AJZ9 1412 aa20.95■□□□□ 0.95
FRG1-201ENST00000226798 ERICH3Q5RHP9 1530 aa20.95■□□□□ 0.94
FRG1-201ENST00000226798 SUPT5HO00267 1087 aaKnown RBP20.93■□□□□ 0.94
FRG1-201ENST00000226798 KIF13AQ9H1H9 1805 aa20.85■□□□□ 0.93
FRG1-201ENST00000226798 RUSC2Q8N2Y8 1516 aa20.82■□□□□ 0.92
FRG1-201ENST00000226798 PRG4Q92954 1404 aaPredicted RBP20.79■□□□□ 0.92
FRG1-201ENST00000226798 JPH4Q96JJ6 628 aa20.71■□□□□ 0.91
FRG1-201ENST00000226798 MAPKBP1O60336 1514 aa20.68■□□□□ 0.9
FRG1-201ENST00000226798 ADCY10Q96PN6 1610 aa20.67■□□□□ 0.9
FRG1-201ENST00000226798 ABCC10Q5T3U5 1492 aa20.66■□□□□ 0.9
FRG1-201ENST00000226798 DIP2BQ9P265 1576 aa20.64■□□□□ 0.9
FRG1-201ENST00000226798 CUL7Q14999 1698 aa20.64■□□□□ 0.89
FRG1-201ENST00000226798 KIAA0586Q9BVV6 1533 aa20.61■□□□□ 0.89
FRG1-201ENST00000226798 IGF1RP08069 1367 aa20.57■□□□□ 0.88
FRG1-201ENST00000226798 KIF27Q86VH2 1401 aa20.55■□□□□ 0.88
FRG1-201ENST00000226798 FAM69CQ0P6D2 419 aa20.55■□□□□ 0.88
FRG1-201ENST00000226798 NPM1P06748 294 aaKnown RBP eCLIP20.53■□□□□ 0.88
FRG1-201ENST00000226798 KDM6BO15054 1643 aa20.49■□□□□ 0.87
FRG1-201ENST00000226798 TSPOAP1O95153 1857 aa20.48■□□□□ 0.87
FRG1-201ENST00000226798 PTPRGP23470 1445 aa20.42■□□□□ 0.86
FRG1-201ENST00000226798 IQGAP2Q13576 1575 aa20.42■□□□□ 0.86
FRG1-201ENST00000226798 CARMIL1Q5VZK9 1371 aa20.41■□□□□ 0.86
FRG1-201ENST00000226798 ABCC2Q92887 1545 aa20.4■□□□□ 0.86
FRG1-201ENST00000226798 TNIKQ9UKE5 1360 aa20.38■□□□□ 0.85
FRG1-201ENST00000226798 PPRC1Q5VV67 1664 aaKnown RBP20.38■□□□□ 0.85
FRG1-201ENST00000226798 CARMIL2Q6F5E8 1435 aa20.37■□□□□ 0.85
FRG1-201ENST00000226798 GLI2P10070 1586 aa20.36■□□□□ 0.85
FRG1-201ENST00000226798 UHRF1BP1LA0JNW5 1464 aa20.35■□□□□ 0.85
FRG1-201ENST00000226798 DISP1Q96F81 1524 aa20.33■□□□□ 0.85
FRG1-201ENST00000226798 ASXL2Q76L83 1435 aa20.33■□□□□ 0.84
FRG1-201ENST00000226798 PLB1Q6P1J6 1458 aa20.32■□□□□ 0.84
FRG1-201ENST00000226798 KDM4FA0A1W2PPD8 638 aa20.32■□□□□ 0.84
FRG1-201ENST00000226798 UACAQ9BZF9 1416 aa20.28■□□□□ 0.84
FRG1-201ENST00000226798 UGGT2Q9NYU1 1516 aa20.28■□□□□ 0.84
FRG1-201ENST00000226798 TTBK1Q5TCY1 1321 aaPredicted RBP20.27■□□□□ 0.83
FRG1-201ENST00000226798 MAP3K4Q9Y6R4 1608 aa20.26■□□□□ 0.83
FRG1-201ENST00000226798 KDM5BQ9UGL1 1544 aa20.26■□□□□ 0.83
FRG1-201ENST00000226798 KIAA0556O60303 1618 aa20.24■□□□□ 0.83
FRG1-201ENST00000226798 ZCCHC11Q5TAX3 1644 aaKnown RBP20.24■□□□□ 0.83
FRG1-201ENST00000226798 RAPGEF2Q9Y4G8 1499 aa20.23■□□□□ 0.83
FRG1-201ENST00000226798 EPRSP07814 1512 aaKnown RBP20.22■□□□□ 0.83
FRG1-201ENST00000226798 CTTNBP2Q8WZ74 1663 aa20.18■□□□□ 0.82
FRG1-201ENST00000226798 COL17A1Q9UMD9 1497 aaPredicted RBP20.18■□□□□ 0.82
FRG1-201ENST00000226798 ADGRL1O94910 1474 aa20.16■□□□□ 0.82
FRG1-201ENST00000226798 TEX14Q8IWB6 1497 aa20.15■□□□□ 0.82
FRG1-201ENST00000226798 WDR7Q9Y4E6 1490 aa20.11■□□□□ 0.81
FRG1-201ENST00000226798 ABCA8O94911 1581 aa20.07■□□□□ 0.8
FRG1-201ENST00000226798 CFAP43Q8NDM7 1665 aa20.07■□□□□ 0.8
FRG1-201ENST00000226798 GOLGA3Q08378 1498 aa20.05■□□□□ 0.8
FRG1-201ENST00000226798 MAGI3Q5TCQ9 1506 aa20.02■□□□□ 0.8
FRG1-201ENST00000226798 PRXQ9BXM0 1461 aa20■□□□□ 0.79
FRG1-201ENST00000226798 HECW2Q9P2P5 1572 aa19.98■□□□□ 0.79
FRG1-201ENST00000226798 CD109Q6YHK3 1445 aa19.97■□□□□ 0.79
FRG1-201ENST00000226798 ILDR1Q86SU0 546 aaPredicted RBP19.91■□□□□ 0.78
FRG1-201ENST00000226798 KIF21BO75037 1637 aa19.9■□□□□ 0.78
FRG1-201ENST00000226798 ARAP3Q8WWN8 1544 aa19.88■□□□□ 0.77
FRG1-201ENST00000226798 KCNH8Q96L42 1107 aa19.88■□□□□ 0.77
FRG1-201ENST00000226798 ABCA9Q8IUA7 1624 aa19.87■□□□□ 0.77
FRG1-201ENST00000226798 SAMD9Q5K651 1589 aa19.87■□□□□ 0.77
FRG1-201ENST00000226798 ATP10BO94823 1461 aa19.85■□□□□ 0.77
FRG1-201ENST00000226798 RAPGEF6Q8TEU7 1601 aa19.8■□□□□ 0.76
FRG1-201ENST00000226798 PHLDB1Q86UU1 1377 aa19.77■□□□□ 0.76
FRG1-201ENST00000226798 ADAMTSL3P82987 1691 aa19.76■□□□□ 0.75
FRG1-201ENST00000226798 FRMPD1Q5SYB0 1578 aa19.75■□□□□ 0.75
FRG1-201ENST00000226798 ARID3CA6NKF2 412 aa19.75■□□□□ 0.75
FRG1-201ENST00000226798 NEO1Q92859 1461 aa19.74■□□□□ 0.75
FRG1-201ENST00000226798 P3H3Q8IVL6 736 aa19.74■□□□□ 0.75
FRG1-201ENST00000226798 FAM9AQ8IZU1 332 aaPredicted RBP19.72■□□□□ 0.75
FRG1-201ENST00000226798 NUP153P49790 1475 aaKnown RBP19.72■□□□□ 0.75
FRG1-201ENST00000226798 PTPRMP28827 1452 aa19.69■□□□□ 0.74
FRG1-201ENST00000226798 BCORL1Q5H9F3 1711 aa19.69■□□□□ 0.74
FRG1-201ENST00000226798 CSRNP3Q8WYN3 585 aa19.68■□□□□ 0.74
FRG1-201ENST00000226798 RAPGEF3O95398 923 aa19.66■□□□□ 0.74
FRG1-201ENST00000226798 ARHGEF40Q8TER5 1519 aa19.66■□□□□ 0.74
FRG1-201ENST00000226798 MADDQ8WXG6 1647 aa19.65■□□□□ 0.74
FRG1-201ENST00000226798 RICTORQ6R327 1708 aa19.65■□□□□ 0.74
FRG1-201ENST00000226798 EEA1Q15075 1411 aa19.63■□□□□ 0.73
FRG1-201ENST00000226798 FHOD3Q2V2M9 1422 aa19.63■□□□□ 0.73
FRG1-201ENST00000226798 CFAP74Q9C0B2 1584 aa19.61■□□□□ 0.73
FRG1-201ENST00000226798 PCF11O94913 1555 aaKnown RBP19.59■□□□□ 0.73
FRG1-201ENST00000226798 EFCAB5A4FU69 1503 aa19.59■□□□□ 0.73
FRG1-201ENST00000226798 TTC37Q6PGP7 1564 aa19.58■□□□□ 0.73
FRG1-201ENST00000226798 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.58■□□□□ 0.733e-10■■■□□ 17.2
FRG1-201ENST00000226798 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.58■□□□□ 0.72
FRG1-201ENST00000226798 HNRNPUL2Q1KMD3 747 aaKnown RBP19.58■□□□□ 0.72
FRG1-201ENST00000226798 ZMYM4Q5VZL5 1548 aa19.57■□□□□ 0.72
FRG1-201ENST00000226798 DENND4BO75064 1496 aaPredicted RBP19.57■□□□□ 0.72
FRG1-201ENST00000226798 RIMS1Q86UR5 1692 aaKnown RBP19.56■□□□□ 0.72
FRG1-201ENST00000226798 FANCAO15360 1455 aa19.56■□□□□ 0.72
FRG1-201ENST00000226798 LMTK3Q96Q04 1460 aa19.56■□□□□ 0.72
FRG1-201ENST00000226798 AKNAQ7Z591 1439 aa19.55■□□□□ 0.72
FRG1-201ENST00000226798 SIGLEC1Q9BZZ2 1709 aa19.54■□□□□ 0.72
FRG1-201ENST00000226798 PLEKHD1A6NEE1 506 aa19.51■□□□□ 0.71
FRG1-201ENST00000226798 ARID4BQ4LE39 1312 aaPredicted RBP19.51■□□□□ 0.71
FRG1-201ENST00000226798 RANGAP1P46060 587 aaPredicted RBP19.5■□□□□ 0.71
FRG1-201ENST00000226798 FBXO41Q8TF61 875 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms