RNA–Protein interactions for RNA: ENST00000226798.8

FRG1-201, Transcript of FSHD region gene 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FRG1, Length 1,074 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRG1-201ENST00000226798 NISCHQ9Y2I1 1504 aa29.57■■■□□ 2.32
FRG1-201ENST00000226798 AEBP2Q6ZN18 517 aaPredicted RBP28.61■■■□□ 2.17
FRG1-201ENST00000226798 CHIC1Q5VXU3 224 aa27.04■■□□□ 1.92
FRG1-201ENST00000226798 ABCC9O60706 1549 aa26.78■■□□□ 1.88
FRG1-201ENST00000226798 CCDC180Q9P1Z9 1646 aa26.71■■□□□ 1.87
FRG1-201ENST00000226798 RB1CC1Q8TDY2 1594 aa25.46■■□□□ 1.67
FRG1-201ENST00000226798 DNAJC5BQ9UF47 199 aa25.27■■□□□ 1.64
FRG1-201ENST00000226798 NACADO15069 1562 aa25.24■■□□□ 1.63
FRG1-201ENST00000226798 UNC13AQ9UPW8 1703 aa24.97■■□□□ 1.59
FRG1-201ENST00000226798 MYO15BQ96JP2 1530 aa24.86■■□□□ 1.57
FRG1-201ENST00000226798 DCAF8L2P0C7V8 631 aa24.84■■□□□ 1.57
FRG1-201ENST00000226798 PABPN1Q86U42 306 aaKnown RBP eCLIP24.83■■□□□ 1.57
FRG1-201ENST00000226798 BICRAQ9NZM4 1560 aa24.76■■□□□ 1.55
FRG1-201ENST00000226798 SENP3Q9H4L4 574 aaPredicted RBP24.57■■□□□ 1.52
FRG1-201ENST00000226798 ZCCHC6Q5VYS8 1495 aaKnown RBP24.5■■□□□ 1.51
FRG1-201ENST00000226798 DCAF1Q9Y4B6 1507 aa24.46■■□□□ 1.51
FRG1-201ENST00000226798 SHROOM4Q9ULL8 1493 aa24.42■■□□□ 1.5
FRG1-201ENST00000226798 SCRIBQ14160 1630 aa24.25■■□□□ 1.47
FRG1-201ENST00000226798 CC2D2AQ9P2K1 1620 aa24.24■■□□□ 1.47
FRG1-201ENST00000226798 CECR2Q9BXF3 1484 aa24.16■■□□□ 1.46
FRG1-201ENST00000226798 EIF4G1Q04637 1599 aaKnown RBP24.15■■□□□ 1.46
FRG1-201ENST00000226798 PHF23Q9BUL5 403 aaPredicted RBP24.14■■□□□ 1.45
FRG1-201ENST00000226798 DNAJC5Q9H3Z4 198 aa23.36■■□□□ 1.33
FRG1-201ENST00000226798 NCAPD3P42695 1498 aa23.29■■□□□ 1.32
FRG1-201ENST00000226798 CUX2O14529 1486 aa23.22■■□□□ 1.31
FRG1-201ENST00000226798 ATAD2BQ9ULI0 1458 aa23.17■■□□□ 1.3
FRG1-201ENST00000226798 SMARCA4P51532 1647 aa23.15■■□□□ 1.3
FRG1-201ENST00000226798 HMGXB3Q12766 1538 aa23.14■■□□□ 1.3
FRG1-201ENST00000226798 ERCC6Q03468 1493 aa23.12■■□□□ 1.29
FRG1-201ENST00000226798 SMARCA2P51531 1590 aa23.12■■□□□ 1.29
FRG1-201ENST00000226798 BAZ1AQ9NRL2 1556 aaPredicted RBP22.97■■□□□ 1.27
FRG1-201ENST00000226798 NESP48681 1621 aa22.97■■□□□ 1.27
FRG1-201ENST00000226798 PEG3Q9GZU2 1588 aa22.96■■□□□ 1.27
FRG1-201ENST00000226798 BAZ1BQ9UIG0 1483 aaKnown RBP22.93■■□□□ 1.26
FRG1-201ENST00000226798 THOC2Q8NI27 1593 aaKnown RBP22.86■■□□□ 1.25
FRG1-201ENST00000226798 FOXD1Q16676 465 aa22.83■■□□□ 1.25
FRG1-201ENST00000226798 LAMC3Q9Y6N6 1575 aa22.82■■□□□ 1.24
FRG1-201ENST00000226798 MROH2BQ7Z745 1585 aa22.77■■□□□ 1.24
FRG1-201ENST00000226798 KIF21AQ7Z4S6 1674 aa22.74■■□□□ 1.23
FRG1-201ENST00000226798 PDS5BQ9NTI5 1447 aa22.63■■□□□ 1.21
FRG1-201ENST00000226798 CADPSQ9ULU8 1353 aa22.52■■□□□ 1.2
FRG1-201ENST00000226798 WIZO95785 1651 aa22.51■■□□□ 1.19
FRG1-201ENST00000226798 MRC2Q9UBG0 1479 aa22.48■■□□□ 1.19
FRG1-201ENST00000226798 WDR62O43379 1518 aa22.48■■□□□ 1.19
FRG1-201ENST00000226798 CEP164Q9UPV0 1460 aa22.34■■□□□ 1.17
FRG1-201ENST00000226798 FANCD2Q9BXW9 1451 aa22.29■■□□□ 1.16
FRG1-201ENST00000226798 CFTRP13569 1480 aa22.27■■□□□ 1.16
FRG1-201ENST00000226798 TOP2AP11388 1531 aaKnown RBP22.22■■□□□ 1.15
FRG1-201ENST00000226798 RSF1Q96T23 1441 aaPredicted RBP22.21■■□□□ 1.15
FRG1-201ENST00000226798 TRIM41Q8WV44 630 aa22.18■■□□□ 1.14
FRG1-201ENST00000226798 URB2Q14146 1524 aaKnown RBP22.15■■□□□ 1.14
FRG1-201ENST00000226798 PRDM2Q13029 1718 aa22.14■■□□□ 1.13
FRG1-201ENST00000226798 OSCARQ8IYS5 282 aa22.01■■□□□ 1.11
FRG1-201ENST00000226798 CCDC88BA6NC98 1476 aa21.92■■□□□ 1.1
FRG1-201ENST00000226798 IFT140Q96RY7 1462 aa21.9■■□□□ 1.1
FRG1-201ENST00000226798 ZNF608Q9ULD9 1512 aaPredicted RBP21.89■■□□□ 1.09
FRG1-201ENST00000226798 RIMBP3CA6NJZ7 1639 aa21.87■■□□□ 1.09
FRG1-201ENST00000226798 RIMBP3BA6NNM3 1639 aa21.87■■□□□ 1.09
FRG1-201ENST00000226798 RIMBP3Q9UFD9 1639 aa21.87■■□□□ 1.09
FRG1-201ENST00000226798 TOPBP1Q92547 1522 aa21.86■■□□□ 1.09
FRG1-201ENST00000226798 EIF4G3O43432 1585 aaKnown RBP21.82■■□□□ 1.08
FRG1-201ENST00000226798 DNMBPQ6XZF7 1577 aa21.79■■□□□ 1.08
FRG1-201ENST00000226798 ABCC8Q09428 1581 aa21.78■■□□□ 1.08
FRG1-201ENST00000226798 ARHGEF11O15085 1522 aa21.76■■□□□ 1.07
FRG1-201ENST00000226798 TARBP1Q13395 1621 aaKnown RBP21.73■■□□□ 1.07
FRG1-201ENST00000226798 CHD1O14646 1710 aa21.7■■□□□ 1.06
FRG1-201ENST00000226798 AQRO60306 1485 aaKnown RBP eCLIP21.63■■□□□ 1.05
FRG1-201ENST00000226798 POLA1P09884 1462 aaPredicted RBP21.63■■□□□ 1.05
FRG1-201ENST00000226798 MSH5O43196 834 aa21.58■■□□□ 1.05
FRG1-201ENST00000226798 PLPPR3Q6T4P5 718 aa21.54■■□□□ 1.04
FRG1-201ENST00000226798 ARAP1Q96P48 1450 aa21.53■■□□□ 1.04
FRG1-201ENST00000226798 RAD54L2Q9Y4B4 1467 aa21.52■■□□□ 1.03
FRG1-201ENST00000226798 WDR97A6NE52 1622 aa21.51■■□□□ 1.03
FRG1-201ENST00000226798 CYB5RLQ6IPT4 315 aa21.49■■□□□ 1.03
FRG1-201ENST00000226798 SOGA1O94964 1423 aa21.46■■□□□ 1.03
FRG1-201ENST00000226798 FGD5Q6ZNL6 1462 aa21.45■■□□□ 1.03
FRG1-201ENST00000226798 CLASP1Q7Z460 1538 aa21.45■■□□□ 1.02
FRG1-201ENST00000226798 TDRD9Q8NDG6 1382 aaKnown RBP21.44■■□□□ 1.02
FRG1-201ENST00000226798 SNAPC4Q5SXM2 1469 aa21.44■■□□□ 1.02
FRG1-201ENST00000226798 FBLN2P98095 1184 aa21.43■■□□□ 1.02
FRG1-201ENST00000226798 CUX1P39880 1505 aa21.43■■□□□ 1.02
FRG1-201ENST00000226798 MAGI1Q96QZ7 1491 aaPredicted RBP21.39■■□□□ 1.02
FRG1-201ENST00000226798 SYNJ1O43426 1573 aa21.37■■□□□ 1.01
FRG1-201ENST00000226798 GRIN2BQ13224 1484 aa21.34■■□□□ 1.01
FRG1-201ENST00000226798 POTEDQ86YR6 584 aa21.33■■□□□ 1.01
FRG1-201ENST00000226798 PBRM1Q86U86 1689 aa21.32■■□□□ 1
FRG1-201ENST00000226798 SYNJ2O15056 1496 aa21.32■■□□□ 1
FRG1-201ENST00000226798 PIAS4Q8N2W9 510 aaPredicted RBP21.31■■□□□ 1
FRG1-201ENST00000226798 TRHP20396 242 aaPredicted RBP21.29■■□□□ 1
FRG1-201ENST00000226798 CHMP7Q8WUX9 453 aaPredicted RBP21.27■■□□□ 1
FRG1-201ENST00000226798 ABCA5Q8WWZ7 1642 aa21.26■□□□□ 0.99
FRG1-201ENST00000226798 GAPVD1Q14C86 1478 aa21.24■□□□□ 0.99
FRG1-201ENST00000226798 ABCA10Q8WWZ4 1543 aa21.22■□□□□ 0.99
FRG1-201ENST00000226798 PPP6R1Q9UPN7 881 aa21.12■□□□□ 0.97
FRG1-201ENST00000226798 ADAMTS12P58397 1594 aa21.1■□□□□ 0.97
FRG1-201ENST00000226798 GRIN2AQ12879 1464 aa21.09■□□□□ 0.97
FRG1-201ENST00000226798 BIVM-ERCC5R4GMW8 1640 aa21.07■□□□□ 0.96
FRG1-201ENST00000226798 ERCC6L2Q5T890 1561 aa21.06■□□□□ 0.96
FRG1-201ENST00000226798 CEP170Q5SW79 1584 aa21.05■□□□□ 0.96
FRG1-201ENST00000226798 WRNQ14191 1432 aaPredicted RBP eCLIP21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms