RNA–Protein interactions for RNA: ENST00000220913.9

CHRAC1-201, Transcript of chromatin accessibility complex subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRAC1, Length 2,488 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRAC1-201ENST00000220913 EFCAB5A4FU69 1503 aa27.86■■■□□ 2.05
CHRAC1-201ENST00000220913 MAP3K1Q13233 1512 aa27.86■■■□□ 2.05
CHRAC1-201ENST00000220913 RRBP1Q9P2E9 1410 aaKnown RBP27.85■■■□□ 2.05
CHRAC1-201ENST00000220913 P3H3Q8IVL6 736 aa27.83■■■□□ 2.05
CHRAC1-201ENST00000220913 PCF11O94913 1555 aaKnown RBP27.83■■■□□ 2.05
CHRAC1-201ENST00000220913 MRC2Q9UBG0 1479 aa27.82■■■□□ 2.04
CHRAC1-201ENST00000220913 FHOD3Q2V2M9 1422 aa27.82■■■□□ 2.04
CHRAC1-201ENST00000220913 CFAP43Q8NDM7 1665 aa27.77■■■□□ 2.04
CHRAC1-201ENST00000220913 LRRC9Q6ZRR7 1453 aa27.74■■■□□ 2.03
CHRAC1-201ENST00000220913 PBRM1Q86U86 1689 aa27.74■■■□□ 2.03
CHRAC1-201ENST00000220913 CCNB3Q8WWL7 1395 aa27.73■■■□□ 2.03
CHRAC1-201ENST00000220913 FYCO1Q9BQS8 1478 aa27.71■■■□□ 2.03
CHRAC1-201ENST00000220913 AQRO60306 1485 aaKnown RBP eCLIP27.67■■■□□ 2.02
CHRAC1-201ENST00000220913 CASKIN1Q8WXD9 1431 aa27.67■■■□□ 2.02
CHRAC1-201ENST00000220913 SAMD9Q5K651 1589 aa27.67■■■□□ 2.02
CHRAC1-201ENST00000220913 ATP1B4Q9UN42 357 aaPredicted RBP27.65■■■□□ 2.02
CHRAC1-201ENST00000220913 WDR62O43379 1518 aa27.63■■■□□ 2.01
CHRAC1-201ENST00000220913 FMN1Q68DA7 1419 aa27.63■■■□□ 2.01
CHRAC1-201ENST00000220913 ADAMTS12P58397 1594 aa27.61■■■□□ 2.01
CHRAC1-201ENST00000220913 SNAPC4Q5SXM2 1469 aa27.59■■■□□ 2.01
CHRAC1-201ENST00000220913 PHLDB1Q86UU1 1377 aa27.58■■■□□ 2.01
CHRAC1-201ENST00000220913 IFT140Q96RY7 1462 aa27.57■■■□□ 2
CHRAC1-201ENST00000220913 GRIN2BQ13224 1484 aa27.56■■■□□ 2
CHRAC1-201ENST00000220913 DHX57Q6P158 1386 aaKnown RBP27.54■■■□□ 2
CHRAC1-201ENST00000220913 ZNF608Q9ULD9 1512 aaPredicted RBP27.53■■■□□ 2
CHRAC1-201ENST00000220913 ITGAEP38570 1179 aa27.52■■■□□ 2
CHRAC1-201ENST00000220913 ERCC6Q03468 1493 aa27.49■■□□□ 1.99
CHRAC1-201ENST00000220913 IQGAP2Q13576 1575 aa27.47■■□□□ 1.99
CHRAC1-201ENST00000220913 LRRIQ1Q96JM4 1722 aa27.47■■□□□ 1.99
CHRAC1-201ENST00000220913 CLSPNQ9HAW4 1339 aa27.47■■□□□ 1.99
CHRAC1-201ENST00000220913 THOC2Q8NI27 1593 aaKnown RBP27.42■■□□□ 1.98
CHRAC1-201ENST00000220913 EIF4G3O43432 1585 aaKnown RBP27.41■■□□□ 1.98
CHRAC1-201ENST00000220913 FAM50AQ14320 339 aaKnown RBP27.4■■□□□ 1.98
CHRAC1-201ENST00000220913 ZNF316A6NFI3 1004 aaPredicted RBP27.39■■□□□ 1.98
CHRAC1-201ENST00000220913 DIEXFQ68CQ4 756 aaKnown RBP27.39■■□□□ 1.98
CHRAC1-201ENST00000220913 MTUS2Q5JR59 1369 aa27.37■■□□□ 1.97
CHRAC1-201ENST00000220913 RAB3GAP2Q9H2M9 1393 aa27.36■■□□□ 1.97
CHRAC1-201ENST00000220913 SETD5Q9C0A6 1442 aa27.31■■□□□ 1.96
CHRAC1-201ENST00000220913 UGGT2Q9NYU1 1516 aa27.3■■□□□ 1.96
CHRAC1-201ENST00000220913 FGD6Q6ZV73 1430 aa27.29■■□□□ 1.96
CHRAC1-201ENST00000220913 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.29■■□□□ 1.96
CHRAC1-201ENST00000220913 HECW1Q76N89 1606 aa27.29■■□□□ 1.96
CHRAC1-201ENST00000220913 EHBP1L1Q8N3D4 1523 aa27.28■■□□□ 1.96
CHRAC1-201ENST00000220913 GRIN2AQ12879 1464 aa27.27■■□□□ 1.96
CHRAC1-201ENST00000220913 CCDC18Q5T9S5 1454 aa27.27■■□□□ 1.96
CHRAC1-201ENST00000220913 SUPT6HQ7KZ85 1726 aaKnown RBP27.27■■□□□ 1.96
CHRAC1-201ENST00000220913 NCOA2Q15596 1464 aa27.26■■□□□ 1.95
CHRAC1-201ENST00000220913 KIAA0586Q9BVV6 1533 aa27.25■■□□□ 1.95
CHRAC1-201ENST00000220913 MAGI3Q5TCQ9 1506 aa27.22■■□□□ 1.95
CHRAC1-201ENST00000220913 MAGI1Q96QZ7 1491 aaPredicted RBP27.21■■□□□ 1.95
CHRAC1-201ENST00000220913 KIAA0556O60303 1618 aa27.19■■□□□ 1.94
CHRAC1-201ENST00000220913 MAPKBP1O60336 1514 aa27.19■■□□□ 1.94
CHRAC1-201ENST00000220913 MYOM3Q5VTT5 1437 aa27.19■■□□□ 1.94
CHRAC1-201ENST00000220913 EPRSP07814 1512 aaKnown RBP27.18■■□□□ 1.94
CHRAC1-201ENST00000220913 DISP1Q96F81 1524 aa27.16■■□□□ 1.94
CHRAC1-201ENST00000220913 ARHGEF11O15085 1522 aa27.15■■□□□ 1.94
CHRAC1-201ENST00000220913 CDK13Q14004 1512 aaKnown RBP27.14■■□□□ 1.94
CHRAC1-201ENST00000220913 SYNJ2O15056 1496 aa27.14■■□□□ 1.93
CHRAC1-201ENST00000220913 CEP170Q5SW79 1584 aa27.11■■□□□ 1.93
CHRAC1-201ENST00000220913 CHMP7Q8WUX9 453 aaPredicted RBP27.1■■□□□ 1.93
CHRAC1-201ENST00000220913 PTPN23Q9H3S7 1636 aa27.09■■□□□ 1.93
CHRAC1-201ENST00000220913 PTPRKQ15262 1439 aa27.07■■□□□ 1.92
CHRAC1-201ENST00000220913 ARID3CA6NKF2 412 aa27.05■■□□□ 1.92
CHRAC1-201ENST00000220913 FBLN2P98095 1184 aa27.02■■□□□ 1.92
CHRAC1-201ENST00000220913 RAPGEF6Q8TEU7 1601 aa27.02■■□□□ 1.92
CHRAC1-201ENST00000220913 SCAF1Q9H7N4 1312 aaKnown RBP27.01■■□□□ 1.91
CHRAC1-201ENST00000220913 HFM1A2PYH4 1435 aa27.01■■□□□ 1.91
CHRAC1-201ENST00000220913 NUP153P49790 1475 aaKnown RBP26.99■■□□□ 1.91
CHRAC1-201ENST00000220913 NUP160Q12769 1436 aa26.99■■□□□ 1.91
CHRAC1-201ENST00000220913 TCOF1Q13428 1488 aaKnown RBP26.99■■□□□ 1.91
CHRAC1-201ENST00000220913 NAIPQ13075 1403 aa26.93■■□□□ 1.9
CHRAC1-201ENST00000220913 MIA2Q96PC5 1412 aa26.91■■□□□ 1.9
CHRAC1-201ENST00000220913 SIN3AQ96ST3 1273 aa26.91■■□□□ 1.9
CHRAC1-201ENST00000220913 CARMIL2Q6F5E8 1435 aa26.88■■□□□ 1.89
CHRAC1-201ENST00000220913 JPH4Q96JJ6 628 aa26.87■■□□□ 1.89
CHRAC1-201ENST00000220913 UACAQ9BZF9 1416 aa26.87■■□□□ 1.89
CHRAC1-201ENST00000220913 NEUROD1Q13562 356 aa26.87■■□□□ 1.89
CHRAC1-201ENST00000220913 PLB1Q6P1J6 1458 aa26.87■■□□□ 1.89
CHRAC1-201ENST00000220913 MIER1Q8N108 512 aa26.86■■□□□ 1.89
CHRAC1-201ENST00000220913 GCC2Q8IWJ2 1684 aa26.84■■□□□ 1.89
CHRAC1-201ENST00000220913 CDK11AQ9UQ88 783 aaPredicted RBP26.82■■□□□ 1.88
CHRAC1-201ENST00000220913 CHIC2Q9UKJ5 165 aa26.8■■□□□ 1.88
CHRAC1-201ENST00000220913 RRP7BPQ9NSQ0 103 aa26.79■■□□□ 1.88
CHRAC1-201ENST00000220913 AKNAQ7Z591 1439 aa26.78■■□□□ 1.88
CHRAC1-201ENST00000220913 TROQ12816 1431 aaPredicted RBP26.77■■□□□ 1.88
CHRAC1-201ENST00000220913 TIMELESSQ9UNS1 1208 aa26.77■■□□□ 1.88
CHRAC1-201ENST00000220913 PRG4Q92954 1404 aaPredicted RBP26.77■■□□□ 1.88
CHRAC1-201ENST00000220913 ACIN1Q9UKV3 1341 aaKnown RBP26.76■■□□□ 1.87
CHRAC1-201ENST00000220913 CENPBP07199 599 aaPredicted RBP26.74■■□□□ 1.87
CHRAC1-201ENST00000220913 KDM6BO15054 1643 aa26.71■■□□□ 1.87
CHRAC1-201ENST00000220913 DNMT1P26358 1616 aaKnown RBP26.71■■□□□ 1.87
CHRAC1-201ENST00000220913 ABCA8O94911 1581 aa26.71■■□□□ 1.87
CHRAC1-201ENST00000220913 ADCY10Q96PN6 1610 aa26.71■■□□□ 1.87
CHRAC1-201ENST00000220913 DAPK1P53355 1430 aa26.71■■□□□ 1.87
CHRAC1-201ENST00000220913 KIF14Q15058 1648 aa26.7■■□□□ 1.86
CHRAC1-201ENST00000220913 CHD1O14646 1710 aa26.7■■□□□ 1.86
CHRAC1-201ENST00000220913 ITSN2Q9NZM3 1697 aa26.68■■□□□ 1.86
CHRAC1-201ENST00000220913 ZNF644Q9H582 1327 aaPredicted RBP26.67■■□□□ 1.86
CHRAC1-201ENST00000220913 ABCC5O15440 1437 aa26.66■■□□□ 1.86
CHRAC1-201ENST00000220913 TONSLQ96HA7 1378 aa26.65■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms