RNA–Protein interactions for RNA: ENST00000219252.9

POLR2C-201, Transcript of RNA polymerase II subunit C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2C, Length 2,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2C-201ENST00000219252 RRBP1Q9P2E9 1410 aaKnown RBP27.76■■■□□ 2.03
POLR2C-201ENST00000219252 FHOD3Q2V2M9 1422 aa27.75■■■□□ 2.03
POLR2C-201ENST00000219252 MRC2Q9UBG0 1479 aa27.75■■■□□ 2.03
POLR2C-201ENST00000219252 MAP3K1Q13233 1512 aa27.75■■■□□ 2.03
POLR2C-201ENST00000219252 FHAD1B1AJZ9 1412 aa27.73■■■□□ 2.03
POLR2C-201ENST00000219252 PCF11O94913 1555 aaKnown RBP27.73■■■□□ 2.03
POLR2C-201ENST00000219252 EFCAB5A4FU69 1503 aa27.72■■■□□ 2.03
POLR2C-201ENST00000219252 LRRC9Q6ZRR7 1453 aa27.66■■■□□ 2.02
POLR2C-201ENST00000219252 CCNB3Q8WWL7 1395 aa27.63■■■□□ 2.01
POLR2C-201ENST00000219252 AQRO60306 1485 aaKnown RBP eCLIP27.63■■■□□ 2.011e-6■■■□□ 18.4
POLR2C-201ENST00000219252 CFAP43Q8NDM7 1665 aa27.62■■■□□ 2.01
POLR2C-201ENST00000219252 PBRM1Q86U86 1689 aa27.61■■■□□ 2.01
POLR2C-201ENST00000219252 FYCO1Q9BQS8 1478 aa27.59■■■□□ 2.01
POLR2C-201ENST00000219252 CASKIN1Q8WXD9 1431 aa27.58■■■□□ 2.01
POLR2C-201ENST00000219252 SAMD9Q5K651 1589 aa27.57■■■□□ 2
POLR2C-201ENST00000219252 WDR62O43379 1518 aa27.57■■■□□ 2
POLR2C-201ENST00000219252 ATP1B4Q9UN42 357 aaPredicted RBP27.56■■■□□ 2
POLR2C-201ENST00000219252 PHLDB1Q86UU1 1377 aa27.54■■■□□ 2
POLR2C-201ENST00000219252 SNAPC4Q5SXM2 1469 aa27.52■■■□□ 2
POLR2C-201ENST00000219252 FMN1Q68DA7 1419 aa27.52■■■□□ 2
POLR2C-201ENST00000219252 ZNF608Q9ULD9 1512 aaPredicted RBP27.52■■■□□ 2
POLR2C-201ENST00000219252 ADAMTS12P58397 1594 aa27.51■■□□□ 1.99
POLR2C-201ENST00000219252 IFT140Q96RY7 1462 aa27.5■■□□□ 1.99
POLR2C-201ENST00000219252 GRIN2BQ13224 1484 aa27.48■■□□□ 1.99
POLR2C-201ENST00000219252 DHX57Q6P158 1386 aaKnown RBP27.47■■□□□ 1.99
POLR2C-201ENST00000219252 ITGAEP38570 1179 aa27.45■■□□□ 1.98
POLR2C-201ENST00000219252 ERCC6Q03468 1493 aa27.41■■□□□ 1.98
POLR2C-201ENST00000219252 LRRIQ1Q96JM4 1722 aa27.39■■□□□ 1.97
POLR2C-201ENST00000219252 IQGAP2Q13576 1575 aa27.37■■□□□ 1.97
POLR2C-201ENST00000219252 THOC2Q8NI27 1593 aaKnown RBP27.36■■□□□ 1.97
POLR2C-201ENST00000219252 CLSPNQ9HAW4 1339 aa27.33■■□□□ 1.97
POLR2C-201ENST00000219252 EIF4G3O43432 1585 aaKnown RBP27.33■■□□□ 1.97
POLR2C-201ENST00000219252 FAM50AQ14320 339 aaKnown RBP27.31■■□□□ 1.96
POLR2C-201ENST00000219252 RAB3GAP2Q9H2M9 1393 aa27.28■■□□□ 1.96
POLR2C-201ENST00000219252 ZNF316A6NFI3 1004 aaPredicted RBP27.27■■□□□ 1.96
POLR2C-201ENST00000219252 MTUS2Q5JR59 1369 aa27.26■■□□□ 1.95
POLR2C-201ENST00000219252 DIEXFQ68CQ4 756 aaKnown RBP27.26■■□□□ 1.95
POLR2C-201ENST00000219252 UGGT2Q9NYU1 1516 aa27.22■■□□□ 1.95
POLR2C-201ENST00000219252 SETD5Q9C0A6 1442 aa27.21■■□□□ 1.95
POLR2C-201ENST00000219252 GRIN2AQ12879 1464 aa27.21■■□□□ 1.95
POLR2C-201ENST00000219252 FGD6Q6ZV73 1430 aa27.2■■□□□ 1.95
POLR2C-201ENST00000219252 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.2■■□□□ 1.94
POLR2C-201ENST00000219252 MAGI3Q5TCQ9 1506 aa27.19■■□□□ 1.94
POLR2C-201ENST00000219252 KIAA0586Q9BVV6 1533 aa27.18■■□□□ 1.94
POLR2C-201ENST00000219252 NCOA2Q15596 1464 aa27.17■■□□□ 1.94
POLR2C-201ENST00000219252 EHBP1L1Q8N3D4 1523 aa27.16■■□□□ 1.94
POLR2C-201ENST00000219252 HECW1Q76N89 1606 aa27.15■■□□□ 1.94
POLR2C-201ENST00000219252 CCDC18Q5T9S5 1454 aa27.14■■□□□ 1.93
POLR2C-201ENST00000219252 MAGI1Q96QZ7 1491 aaPredicted RBP27.13■■□□□ 1.93
POLR2C-201ENST00000219252 DISP1Q96F81 1524 aa27.13■■□□□ 1.93
POLR2C-201ENST00000219252 MAPKBP1O60336 1514 aa27.12■■□□□ 1.93
POLR2C-201ENST00000219252 SUPT6HQ7KZ85 1726 aaKnown RBP27.11■■□□□ 1.93
POLR2C-201ENST00000219252 EPRSP07814 1512 aaKnown RBP27.11■■□□□ 1.93
POLR2C-201ENST00000219252 KIAA0556O60303 1618 aa27.1■■□□□ 1.93
POLR2C-201ENST00000219252 MYOM3Q5VTT5 1437 aa27.09■■□□□ 1.93
POLR2C-201ENST00000219252 ARHGEF11O15085 1522 aa27.09■■□□□ 1.93
POLR2C-201ENST00000219252 CDK13Q14004 1512 aaKnown RBP27.08■■□□□ 1.93
POLR2C-201ENST00000219252 SYNJ2O15056 1496 aa27.07■■□□□ 1.92
POLR2C-201ENST00000219252 CEP170Q5SW79 1584 aa27.05■■□□□ 1.92
POLR2C-201ENST00000219252 PTPRKQ15262 1439 aa27.05■■□□□ 1.92
POLR2C-201ENST00000219252 CHMP7Q8WUX9 453 aaPredicted RBP27.04■■□□□ 1.92
POLR2C-201ENST00000219252 ARID3CA6NKF2 412 aa27.02■■□□□ 1.92
POLR2C-201ENST00000219252 FBLN2P98095 1184 aa26.97■■□□□ 1.91
POLR2C-201ENST00000219252 PTPN23Q9H3S7 1636 aa26.97■■□□□ 1.91
POLR2C-201ENST00000219252 NUP153P49790 1475 aaKnown RBP26.94■■□□□ 1.9
POLR2C-201ENST00000219252 NUP160Q12769 1436 aa26.94■■□□□ 1.9
POLR2C-201ENST00000219252 HFM1A2PYH4 1435 aa26.92■■□□□ 1.9
POLR2C-201ENST00000219252 RAPGEF6Q8TEU7 1601 aa26.91■■□□□ 1.9
POLR2C-201ENST00000219252 TCOF1Q13428 1488 aaKnown RBP26.9■■□□□ 1.9
POLR2C-201ENST00000219252 SIN3AQ96ST3 1273 aa26.86■■□□□ 1.89
POLR2C-201ENST00000219252 NAIPQ13075 1403 aa26.86■■□□□ 1.89
POLR2C-201ENST00000219252 JPH4Q96JJ6 628 aa26.84■■□□□ 1.89
POLR2C-201ENST00000219252 PLB1Q6P1J6 1458 aa26.82■■□□□ 1.88
POLR2C-201ENST00000219252 MIA2Q96PC5 1412 aa26.82■■□□□ 1.88
POLR2C-201ENST00000219252 MIER1Q8N108 512 aa26.79■■□□□ 1.88
POLR2C-201ENST00000219252 NEUROD1Q13562 356 aa26.78■■□□□ 1.88
POLR2C-201ENST00000219252 CARMIL2Q6F5E8 1435 aa26.77■■□□□ 1.88
POLR2C-201ENST00000219252 UACAQ9BZF9 1416 aa26.76■■□□□ 1.87
POLR2C-201ENST00000219252 CHIC2Q9UKJ5 165 aa26.75■■□□□ 1.87
POLR2C-201ENST00000219252 RRP7BPQ9NSQ0 103 aa26.74■■□□□ 1.87
POLR2C-201ENST00000219252 PRG4Q92954 1404 aaPredicted RBP26.72■■□□□ 1.87
POLR2C-201ENST00000219252 CDK11AQ9UQ88 783 aaPredicted RBP26.7■■□□□ 1.86
POLR2C-201ENST00000219252 TROQ12816 1431 aaPredicted RBP26.69■■□□□ 1.86
POLR2C-201ENST00000219252 GCC2Q8IWJ2 1684 aa26.69■■□□□ 1.86
POLR2C-201ENST00000219252 AKNAQ7Z591 1439 aa26.68■■□□□ 1.86
POLR2C-201ENST00000219252 KDM6BO15054 1643 aa26.66■■□□□ 1.86
POLR2C-201ENST00000219252 ZNF644Q9H582 1327 aaPredicted RBP26.66■■□□□ 1.86
POLR2C-201ENST00000219252 TIMELESSQ9UNS1 1208 aa26.65■■□□□ 1.86
POLR2C-201ENST00000219252 ABCA8O94911 1581 aa26.65■■□□□ 1.86
POLR2C-201ENST00000219252 SCAF1Q9H7N4 1312 aaKnown RBP26.64■■□□□ 1.86
POLR2C-201ENST00000219252 DAPK1P53355 1430 aa26.63■■□□□ 1.85
POLR2C-201ENST00000219252 ACIN1Q9UKV3 1341 aaKnown RBP26.62■■□□□ 1.85
POLR2C-201ENST00000219252 KIF14Q15058 1648 aa26.62■■□□□ 1.85
POLR2C-201ENST00000219252 ABCC5O15440 1437 aa26.6■■□□□ 1.85
POLR2C-201ENST00000219252 DNMT1P26358 1616 aaKnown RBP26.6■■□□□ 1.85
POLR2C-201ENST00000219252 CHD1O14646 1710 aa26.6■■□□□ 1.85
POLR2C-201ENST00000219252 ADCY10Q96PN6 1610 aa26.59■■□□□ 1.85
POLR2C-201ENST00000219252 DENND4BO75064 1496 aaPredicted RBP26.58■■□□□ 1.85
POLR2C-201ENST00000219252 PPP1R15AO75807 674 aaPredicted RBP26.58■■□□□ 1.84
POLR2C-201ENST00000219252 GPATCH8Q9UKJ3 1502 aaKnown RBP26.56■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms