RNA–Protein interactions for RNA: ENST00000219252.9

POLR2C-201, Transcript of RNA polymerase II subunit C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2C, Length 2,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2C-201ENST00000219252 NISCHQ9Y2I1 1504 aa40.02■■■■■ 4
POLR2C-201ENST00000219252 CCDC180Q9P1Z9 1646 aa34.38■■■■□ 3.09
POLR2C-201ENST00000219252 ZCCHC6Q5VYS8 1495 aaKnown RBP33.76■■■■□ 3
POLR2C-201ENST00000219252 SHROOM4Q9ULL8 1493 aa33.47■■■□□ 2.95
POLR2C-201ENST00000219252 DCAF8L2P0C7V8 631 aa33.06■■■□□ 2.88
POLR2C-201ENST00000219252 DCAF1Q9Y4B6 1507 aa32.94■■■□□ 2.86
POLR2C-201ENST00000219252 SUPT5HO00267 1087 aaKnown RBP32.52■■■□□ 2.8
POLR2C-201ENST00000219252 MYO15BQ96JP2 1530 aa32.23■■■□□ 2.75
POLR2C-201ENST00000219252 ABCC9O60706 1549 aa32.17■■■□□ 2.74
POLR2C-201ENST00000219252 SCRIBQ14160 1630 aa31.98■■■□□ 2.71
POLR2C-201ENST00000219252 NACADO15069 1562 aa31.89■■■□□ 2.7
POLR2C-201ENST00000219252 RB1CC1Q8TDY2 1594 aa31.47■■■□□ 2.63
POLR2C-201ENST00000219252 CHIC1Q5VXU3 224 aa31.44■■■□□ 2.62
POLR2C-201ENST00000219252 RSF1Q96T23 1441 aaPredicted RBP31.41■■■□□ 2.62
POLR2C-201ENST00000219252 CECR2Q9BXF3 1484 aa31.21■■■□□ 2.59
POLR2C-201ENST00000219252 MROH2BQ7Z745 1585 aa31.06■■■□□ 2.56
POLR2C-201ENST00000219252 UNC13AQ9UPW8 1703 aa31■■■□□ 2.55
POLR2C-201ENST00000219252 WIZO95785 1651 aa30.85■■■□□ 2.53
POLR2C-201ENST00000219252 BAZ1AQ9NRL2 1556 aaPredicted RBP30.78■■■□□ 2.52
POLR2C-201ENST00000219252 BICRAQ9NZM4 1560 aa30.67■■■□□ 2.5
POLR2C-201ENST00000219252 SMARCA4P51532 1647 aa30.61■■■□□ 2.49
POLR2C-201ENST00000219252 PABPN1Q86U42 306 aaKnown RBP eCLIP30.59■■■□□ 2.49
POLR2C-201ENST00000219252 TOP2AP11388 1531 aaKnown RBP30.41■■■□□ 2.46
POLR2C-201ENST00000219252 LOC105371045A0A1W2PR82 267 aa30.4■■■□□ 2.46
POLR2C-201ENST00000219252 TRIM41Q8WV44 630 aa30.38■■■□□ 2.45
POLR2C-201ENST00000219252 EIF4G1Q04637 1599 aaKnown RBP30.27■■■□□ 2.44
POLR2C-201ENST00000219252 CCDC88BA6NC98 1476 aa30.22■■■□□ 2.43
POLR2C-201ENST00000219252 SMARCA2P51531 1590 aa30.21■■■□□ 2.43
POLR2C-201ENST00000219252 PEG3Q9GZU2 1588 aa30.12■■■□□ 2.41
POLR2C-201ENST00000219252 FAM9AQ8IZU1 332 aaPredicted RBP30.03■■■□□ 2.4
POLR2C-201ENST00000219252 ATAD2BQ9ULI0 1458 aa29.95■■■□□ 2.39
POLR2C-201ENST00000219252 ABCC8Q09428 1581 aa29.9■■■□□ 2.38
POLR2C-201ENST00000219252 BAZ1BQ9UIG0 1483 aaKnown RBP29.8■■■□□ 2.36
POLR2C-201ENST00000219252 PCGF6Q9BYE7 350 aa29.73■■■□□ 2.35
POLR2C-201ENST00000219252 EHMT2Q96KQ7 1210 aa29.72■■■□□ 2.35
POLR2C-201ENST00000219252 NCAPD3P42695 1498 aa29.5■■■□□ 2.31
POLR2C-201ENST00000219252 SOGA1O94964 1423 aa29.5■■■□□ 2.31
POLR2C-201ENST00000219252 WRNQ14191 1432 aaPredicted RBP eCLIP29.5■■■□□ 2.31
POLR2C-201ENST00000219252 HMGXB3Q12766 1538 aa29.47■■■□□ 2.31
POLR2C-201ENST00000219252 SYNJ1O43426 1573 aa29.41■■■□□ 2.3
POLR2C-201ENST00000219252 RUSC2Q8N2Y8 1516 aa29.4■■■□□ 2.3
POLR2C-201ENST00000219252 HRCP23327 699 aa29.38■■■□□ 2.29
POLR2C-201ENST00000219252 TRIM26Q12899 539 aaPredicted RBP29.38■■■□□ 2.29
POLR2C-201ENST00000219252 EEA1Q15075 1411 aa29.31■■■□□ 2.28
POLR2C-201ENST00000219252 CSRNP3Q8WYN3 585 aa29.25■■■□□ 2.27
POLR2C-201ENST00000219252 TOP2BQ02880 1626 aa29.12■■■□□ 2.25
POLR2C-201ENST00000219252 TNIKQ9UKE5 1360 aa29.11■■■□□ 2.25
POLR2C-201ENST00000219252 CFTRP13569 1480 aa29.09■■■□□ 2.25
POLR2C-201ENST00000219252 CEP162Q5TB80 1403 aa29.08■■■□□ 2.25
POLR2C-201ENST00000219252 BIVM-ERCC5R4GMW8 1640 aa29.05■■■□□ 2.24
POLR2C-201ENST00000219252 GOLGA3Q08378 1498 aa29.05■■■□□ 2.24
POLR2C-201ENST00000219252 CC2D2AQ9P2K1 1620 aa29.04■■■□□ 2.24
POLR2C-201ENST00000219252 UBTFP17480 764 aaKnown RBP29■■■□□ 2.23
POLR2C-201ENST00000219252 PPARGC1BQ86YN6 1023 aaKnown RBP28.99■■■□□ 2.23
POLR2C-201ENST00000219252 CUX1P39880 1505 aa28.96■■■□□ 2.23
POLR2C-201ENST00000219252 KIF21BO75037 1637 aa28.96■■■□□ 2.23
POLR2C-201ENST00000219252 CEP164Q9UPV0 1460 aa28.95■■■□□ 2.23
POLR2C-201ENST00000219252 PRDM2Q13029 1718 aa28.85■■■□□ 2.21
POLR2C-201ENST00000219252 CADPSQ9ULU8 1353 aa28.85■■■□□ 2.21
POLR2C-201ENST00000219252 RAPGEF2Q9Y4G8 1499 aa28.83■■■□□ 2.21
POLR2C-201ENST00000219252 PRXQ9BXM0 1461 aa28.68■■■□□ 2.18
POLR2C-201ENST00000219252 CLIP1P30622 1438 aa28.67■■■□□ 2.18
POLR2C-201ENST00000219252 KIF27Q86VH2 1401 aa28.63■■■□□ 2.17
POLR2C-201ENST00000219252 TTBK1Q5TCY1 1321 aaPredicted RBP28.62■■■□□ 2.17
POLR2C-201ENST00000219252 ERICH3Q5RHP9 1530 aa28.61■■■□□ 2.17
POLR2C-201ENST00000219252 FANCD2Q9BXW9 1451 aa28.56■■■□□ 2.16
POLR2C-201ENST00000219252 NESP48681 1621 aa28.53■■■□□ 2.16
POLR2C-201ENST00000219252 FGD5Q6ZNL6 1462 aa28.52■■■□□ 2.16
POLR2C-201ENST00000219252 RANGAP1P46060 587 aaPredicted RBP28.5■■■□□ 2.15
POLR2C-201ENST00000219252 VPS8Q8N3P4 1428 aa28.5■■■□□ 2.15
POLR2C-201ENST00000219252 CUX2O14529 1486 aa28.48■■■□□ 2.15
POLR2C-201ENST00000219252 ZEB1P37275 1124 aaPredicted RBP28.44■■■□□ 2.14
POLR2C-201ENST00000219252 DNAJC5BQ9UF47 199 aa28.41■■■□□ 2.14
POLR2C-201ENST00000219252 IGF1RP08069 1367 aa28.4■■■□□ 2.14
POLR2C-201ENST00000219252 DNMBPQ6XZF7 1577 aa28.36■■■□□ 2.13
POLR2C-201ENST00000219252 TOPBP1Q92547 1522 aa28.33■■■□□ 2.13
POLR2C-201ENST00000219252 ARAP1Q96P48 1450 aa28.33■■■□□ 2.13
POLR2C-201ENST00000219252 LAMC3Q9Y6N6 1575 aa28.33■■■□□ 2.13
POLR2C-201ENST00000219252 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.29■■■□□ 2.12
POLR2C-201ENST00000219252 RAD54L2Q9Y4B4 1467 aa28.28■■■□□ 2.12
POLR2C-201ENST00000219252 POLA1P09884 1462 aaPredicted RBP28.27■■■□□ 2.12
POLR2C-201ENST00000219252 CARMIL1Q5VZK9 1371 aa28.24■■■□□ 2.11
POLR2C-201ENST00000219252 URB2Q14146 1524 aaKnown RBP28.21■■■□□ 2.11
POLR2C-201ENST00000219252 ABCA10Q8WWZ4 1543 aa28.21■■■□□ 2.11
POLR2C-201ENST00000219252 ARHGAP35Q9NRY4 1499 aa28.19■■■□□ 2.1
POLR2C-201ENST00000219252 APLP2Q06481 763 aa28.19■■■□□ 2.1
POLR2C-201ENST00000219252 CCER1Q8TC90 406 aaPredicted RBP28.15■■■□□ 2.1
POLR2C-201ENST00000219252 PDS5BQ9NTI5 1447 aa28.12■■■□□ 2.09
POLR2C-201ENST00000219252 KIF21AQ7Z4S6 1674 aa28.06■■■□□ 2.08
POLR2C-201ENST00000219252 WDR97A6NE52 1622 aa28.04■■■□□ 2.08
POLR2C-201ENST00000219252 KANK4Q5T7N3 995 aaPredicted RBP28.03■■■□□ 2.08
POLR2C-201ENST00000219252 HNRNPUL2Q1KMD3 747 aaKnown RBP27.98■■■□□ 2.07
POLR2C-201ENST00000219252 CUL7Q14999 1698 aa27.95■■■□□ 2.07
POLR2C-201ENST00000219252 TDRD9Q8NDG6 1382 aaKnown RBP27.94■■■□□ 2.06
POLR2C-201ENST00000219252 ABCA5Q8WWZ7 1642 aa27.92■■■□□ 2.06
POLR2C-201ENST00000219252 GAPVD1Q14C86 1478 aa27.85■■■□□ 2.05
POLR2C-201ENST00000219252 TARBP1Q13395 1621 aaKnown RBP27.83■■■□□ 2.05
POLR2C-201ENST00000219252 P3H3Q8IVL6 736 aa27.8■■■□□ 2.04
POLR2C-201ENST00000219252 CTTNBP2Q8WZ74 1663 aa27.79■■■□□ 2.04
POLR2C-201ENST00000219252 TIAM1Q13009 1591 aa27.77■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms