RNA–Protein interactions for RNA: ENST00000216106.5

HMGXB4-201, Transcript of HMG-box containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGXB4, Length 4,047 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-201ENST00000216106 FHOD3Q2V2M9 1422 aa12.02□□□□□ -0.48
HMGXB4-201ENST00000216106 MRC2Q9UBG0 1479 aa12.02□□□□□ -0.49
HMGXB4-201ENST00000216106 PCF11O94913 1555 aaKnown RBP12.02□□□□□ -0.49
HMGXB4-201ENST00000216106 FHAD1B1AJZ9 1412 aa12.01□□□□□ -0.49
HMGXB4-201ENST00000216106 EFCAB5A4FU69 1503 aa12.01□□□□□ -0.49
HMGXB4-201ENST00000216106 PBRM1Q86U86 1689 aa12□□□□□ -0.49
HMGXB4-201ENST00000216106 RRBP1Q9P2E9 1410 aaKnown RBP11.99□□□□□ -0.49
HMGXB4-201ENST00000216106 MAP3K1Q13233 1512 aa11.98□□□□□ -0.49
HMGXB4-201ENST00000216106 CFAP43Q8NDM7 1665 aa11.98□□□□□ -0.49
HMGXB4-201ENST00000216106 ATP1B4Q9UN42 357 aaPredicted RBP11.97□□□□□ -0.49
HMGXB4-201ENST00000216106 AQRO60306 1485 aaKnown RBP eCLIP11.97□□□□□ -0.492e-6■■■■■ 29.3
HMGXB4-201ENST00000216106 LRRC9Q6ZRR7 1453 aa11.97□□□□□ -0.49
HMGXB4-201ENST00000216106 CCNB3Q8WWL7 1395 aa11.95□□□□□ -0.5
HMGXB4-201ENST00000216106 FYCO1Q9BQS8 1478 aa11.95□□□□□ -0.5
HMGXB4-201ENST00000216106 WDR62O43379 1518 aa11.94□□□□□ -0.5
HMGXB4-201ENST00000216106 SAMD9Q5K651 1589 aa11.94□□□□□ -0.5
HMGXB4-201ENST00000216106 CASKIN1Q8WXD9 1431 aa11.93□□□□□ -0.5
HMGXB4-201ENST00000216106 ADAMTS12P58397 1594 aa11.92□□□□□ -0.5
HMGXB4-201ENST00000216106 FMN1Q68DA7 1419 aa11.92□□□□□ -0.5
HMGXB4-201ENST00000216106 ZNF608Q9ULD9 1512 aaPredicted RBP11.92□□□□□ -0.5
HMGXB4-201ENST00000216106 ERCC6Q03468 1493 aa11.91□□□□□ -0.5
HMGXB4-201ENST00000216106 ITGAEP38570 1179 aa11.91□□□□□ -0.5
HMGXB4-201ENST00000216106 IFT140Q96RY7 1462 aa11.91□□□□□ -0.5
HMGXB4-201ENST00000216106 PHLDB1Q86UU1 1377 aa11.91□□□□□ -0.5
HMGXB4-201ENST00000216106 SNAPC4Q5SXM2 1469 aa11.9□□□□□ -0.5
HMGXB4-201ENST00000216106 GRIN2BQ13224 1484 aa11.9□□□□□ -0.5
HMGXB4-201ENST00000216106 LRRIQ1Q96JM4 1722 aa11.88□□□□□ -0.51
HMGXB4-201ENST00000216106 IQGAP2Q13576 1575 aa11.87□□□□□ -0.51
HMGXB4-201ENST00000216106 DHX57Q6P158 1386 aaKnown RBP11.86□□□□□ -0.51
HMGXB4-201ENST00000216106 THOC2Q8NI27 1593 aaKnown RBP11.86□□□□□ -0.51
HMGXB4-201ENST00000216106 EIF4G3O43432 1585 aaKnown RBP11.86□□□□□ -0.51
HMGXB4-201ENST00000216106 FAM50AQ14320 339 aaKnown RBP11.84□□□□□ -0.51
HMGXB4-201ENST00000216106 MTUS2Q5JR59 1369 aa11.82□□□□□ -0.52
HMGXB4-201ENST00000216106 CLSPNQ9HAW4 1339 aa11.8□□□□□ -0.52
HMGXB4-201ENST00000216106 RAB3GAP2Q9H2M9 1393 aa11.8□□□□□ -0.52
HMGXB4-201ENST00000216106 DIEXFQ68CQ4 756 aaKnown RBP11.8□□□□□ -0.52
HMGXB4-201ENST00000216106 ZNF316A6NFI3 1004 aaPredicted RBP11.78□□□□□ -0.52
HMGXB4-201ENST00000216106 GRIN2AQ12879 1464 aa11.78□□□□□ -0.52
HMGXB4-201ENST00000216106 UGGT2Q9NYU1 1516 aa11.78□□□□□ -0.52
HMGXB4-201ENST00000216106 HECW1Q76N89 1606 aa11.78□□□□□ -0.52
HMGXB4-201ENST00000216106 FGD6Q6ZV73 1430 aa11.77□□□□□ -0.53
HMGXB4-201ENST00000216106 EHBP1L1Q8N3D4 1523 aa11.77□□□□□ -0.53
HMGXB4-201ENST00000216106 SUPT6HQ7KZ85 1726 aaKnown RBP11.77□□□□□ -0.53
HMGXB4-201ENST00000216106 SETD5Q9C0A6 1442 aa11.77□□□□□ -0.53
HMGXB4-201ENST00000216106 KIAA0586Q9BVV6 1533 aa11.76□□□□□ -0.53
HMGXB4-201ENST00000216106 NCOA2Q15596 1464 aa11.76□□□□□ -0.53
HMGXB4-201ENST00000216106 MAGI3Q5TCQ9 1506 aa11.76□□□□□ -0.53
HMGXB4-201ENST00000216106 CCDC18Q5T9S5 1454 aa11.76□□□□□ -0.53
HMGXB4-201ENST00000216106 MAGI1Q96QZ7 1491 aaPredicted RBP11.75□□□□□ -0.53
HMGXB4-201ENST00000216106 KIAA0556O60303 1618 aa11.74□□□□□ -0.53
HMGXB4-201ENST00000216106 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.74□□□□□ -0.53
HMGXB4-201ENST00000216106 EPRSP07814 1512 aaKnown RBP11.74□□□□□ -0.53
HMGXB4-201ENST00000216106 CDK13Q14004 1512 aaKnown RBP11.74□□□□□ -0.53
HMGXB4-201ENST00000216106 DISP1Q96F81 1524 aa11.74□□□□□ -0.53
HMGXB4-201ENST00000216106 ARID3CA6NKF2 412 aa11.73□□□□□ -0.53
HMGXB4-201ENST00000216106 MYOM3Q5VTT5 1437 aa11.73□□□□□ -0.53
HMGXB4-201ENST00000216106 SYNJ2O15056 1496 aa11.72□□□□□ -0.53
HMGXB4-201ENST00000216106 CHMP7Q8WUX9 453 aaPredicted RBP11.72□□□□□ -0.53
HMGXB4-201ENST00000216106 CEP170Q5SW79 1584 aa11.72□□□□□ -0.53
HMGXB4-201ENST00000216106 FBLN2P98095 1184 aa11.72□□□□□ -0.53
HMGXB4-201ENST00000216106 MAPKBP1O60336 1514 aa11.72□□□□□ -0.53
HMGXB4-201ENST00000216106 ARHGEF11O15085 1522 aa11.7□□□□□ -0.54
HMGXB4-201ENST00000216106 PTPN23Q9H3S7 1636 aa11.69□□□□□ -0.54
HMGXB4-201ENST00000216106 PTPRKQ15262 1439 aa11.68□□□□□ -0.54
HMGXB4-201ENST00000216106 RAPGEF6Q8TEU7 1601 aa11.67□□□□□ -0.54
HMGXB4-201ENST00000216106 NUP153P49790 1475 aaKnown RBP11.66□□□□□ -0.54
HMGXB4-201ENST00000216106 NUP160Q12769 1436 aa11.65□□□□□ -0.54
HMGXB4-201ENST00000216106 HFM1A2PYH4 1435 aa11.64□□□□□ -0.55
HMGXB4-201ENST00000216106 TCOF1Q13428 1488 aaKnown RBP11.62□□□□□ -0.55
HMGXB4-201ENST00000216106 PLB1Q6P1J6 1458 aa11.62□□□□□ -0.55
HMGXB4-201ENST00000216106 JPH4Q96JJ6 628 aa11.62□□□□□ -0.55
HMGXB4-201ENST00000216106 SIN3AQ96ST3 1273 aa11.62□□□□□ -0.55
HMGXB4-201ENST00000216106 NAIPQ13075 1403 aa11.61□□□□□ -0.55
HMGXB4-201ENST00000216106 NEUROD1Q13562 356 aa11.61□□□□□ -0.55
HMGXB4-201ENST00000216106 CARMIL2Q6F5E8 1435 aa11.61□□□□□ -0.55
HMGXB4-201ENST00000216106 MIA2Q96PC5 1412 aa11.6□□□□□ -0.55
HMGXB4-201ENST00000216106 CHIC2Q9UKJ5 165 aa11.59□□□□□ -0.55
HMGXB4-201ENST00000216106 UACAQ9BZF9 1416 aa11.58□□□□□ -0.56
HMGXB4-201ENST00000216106 RRP7BPQ9NSQ0 103 aa11.58□□□□□ -0.56
HMGXB4-201ENST00000216106 GCC2Q8IWJ2 1684 aa11.57□□□□□ -0.56
HMGXB4-201ENST00000216106 MIER1Q8N108 512 aa11.57□□□□□ -0.56
HMGXB4-201ENST00000216106 CDK11AQ9UQ88 783 aaPredicted RBP11.57□□□□□ -0.56
HMGXB4-201ENST00000216106 PRG4Q92954 1404 aaPredicted RBP11.57□□□□□ -0.56
HMGXB4-201ENST00000216106 CHD1O14646 1710 aa11.56□□□□□ -0.56
HMGXB4-201ENST00000216106 TROQ12816 1431 aaPredicted RBP11.55□□□□□ -0.56
HMGXB4-201ENST00000216106 KIF14Q15058 1648 aa11.54□□□□□ -0.56
HMGXB4-201ENST00000216106 KDM6BO15054 1643 aa11.54□□□□□ -0.56
HMGXB4-201ENST00000216106 ZNF644Q9H582 1327 aaPredicted RBP11.53□□□□□ -0.56
HMGXB4-201ENST00000216106 ABCA8O94911 1581 aa11.53□□□□□ -0.56
HMGXB4-201ENST00000216106 AKNAQ7Z591 1439 aa11.53□□□□□ -0.56
HMGXB4-201ENST00000216106 DAPK1P53355 1430 aa11.52□□□□□ -0.56
HMGXB4-201ENST00000216106 DNMT1P26358 1616 aaKnown RBP11.52□□□□□ -0.56
HMGXB4-201ENST00000216106 ADCY10Q96PN6 1610 aa11.52□□□□□ -0.57
HMGXB4-201ENST00000216106 ITSN2Q9NZM3 1697 aa11.52□□□□□ -0.57
HMGXB4-201ENST00000216106 ABCC5O15440 1437 aa11.5□□□□□ -0.57
HMGXB4-201ENST00000216106 YTHDC1Q96MU7 727 aaKnown RBP11.5□□□□□ -0.57
HMGXB4-201ENST00000216106 TIMELESSQ9UNS1 1208 aa11.5□□□□□ -0.57
HMGXB4-201ENST00000216106 SCAF1Q9H7N4 1312 aaKnown RBP11.5□□□□□ -0.57
HMGXB4-201ENST00000216106 ACIN1Q9UKV3 1341 aaKnown RBP11.5□□□□□ -0.57
HMGXB4-201ENST00000216106 CAMSAP2Q08AD1 1489 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms