RNA–Protein interactions for RNA: ENST00000157812.6

PSMC4-201, Transcript of proteasome 26S subunit, ATPase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSMC4, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC4-201ENST00000157812 ZEB1P37275 1124 aaPredicted RBP20.76■□□□□ 0.91
PSMC4-201ENST00000157812 FBLN2P98095 1184 aa20.76■□□□□ 0.91
PSMC4-201ENST00000157812 GRIN2AQ12879 1464 aa20.75■□□□□ 0.91
PSMC4-201ENST00000157812 CTTNBP2Q8WZ74 1663 aa20.71■□□□□ 0.91
PSMC4-201ENST00000157812 UBTFP17480 764 aaKnown RBP20.69■□□□□ 0.9
PSMC4-201ENST00000157812 CEP170Q5SW79 1584 aa20.62■□□□□ 0.89
PSMC4-201ENST00000157812 NUP160Q12769 1436 aa20.6■□□□□ 0.89
PSMC4-201ENST00000157812 IQGAP2Q13576 1575 aa20.56■□□□□ 0.88
PSMC4-201ENST00000157812 KIAA0586Q9BVV6 1533 aa20.55■□□□□ 0.88
PSMC4-201ENST00000157812 CLIP1P30622 1438 aa20.54■□□□□ 0.88
PSMC4-201ENST00000157812 OSCARQ8IYS5 282 aa20.52■□□□□ 0.88
PSMC4-201ENST00000157812 CLASP1Q7Z460 1538 aa20.49■□□□□ 0.87
PSMC4-201ENST00000157812 VPS8Q8N3P4 1428 aa20.48■□□□□ 0.87
PSMC4-201ENST00000157812 RANGAP1P46060 587 aaPredicted RBP20.46■□□□□ 0.87
PSMC4-201ENST00000157812 SHROOM2Q13796 1616 aa20.43■□□□□ 0.86
PSMC4-201ENST00000157812 UGGT2Q9NYU1 1516 aa20.43■□□□□ 0.86
PSMC4-201ENST00000157812 PPARGC1BQ86YN6 1023 aaKnown RBP20.41■□□□□ 0.86
PSMC4-201ENST00000157812 JPH4Q96JJ6 628 aa20.41■□□□□ 0.86
PSMC4-201ENST00000157812 EFCAB5A4FU69 1503 aa20.41■□□□□ 0.86
PSMC4-201ENST00000157812 SAMD9Q5K651 1589 aa20.39■□□□□ 0.85
PSMC4-201ENST00000157812 CARMIL2Q6F5E8 1435 aa20.35■□□□□ 0.85
PSMC4-201ENST00000157812 KIAA0556O60303 1618 aa20.34■□□□□ 0.85
PSMC4-201ENST00000157812 ARHGAP35Q9NRY4 1499 aa20.34■□□□□ 0.85
PSMC4-201ENST00000157812 PRG4Q92954 1404 aaPredicted RBP20.33■□□□□ 0.85
PSMC4-201ENST00000157812 DISP1Q96F81 1524 aa20.32■□□□□ 0.84
PSMC4-201ENST00000157812 APLP2Q06481 763 aa20.29■□□□□ 0.84
PSMC4-201ENST00000157812 P3H3Q8IVL6 736 aa20.29■□□□□ 0.84
PSMC4-201ENST00000157812 FHOD3Q2V2M9 1422 aa20.26■□□□□ 0.83
PSMC4-201ENST00000157812 ARAP1Q96P48 1450 aa20.25■□□□□ 0.83
PSMC4-201ENST00000157812 ERCC6L2Q5T890 1561 aa20.25■□□□□ 0.83
PSMC4-201ENST00000157812 FMN1Q68DA7 1419 aa20.2■□□□□ 0.82
PSMC4-201ENST00000157812 CCER1Q8TC90 406 aaPredicted RBP20.2■□□□□ 0.82
PSMC4-201ENST00000157812 ARHGEF11O15085 1522 aa20.19■□□□□ 0.82
PSMC4-201ENST00000157812 TTBK1Q5TCY1 1321 aaPredicted RBP20.18■□□□□ 0.82
PSMC4-201ENST00000157812 RIMBP3CA6NJZ7 1639 aa20.17■□□□□ 0.82
PSMC4-201ENST00000157812 RIMBP3BA6NNM3 1639 aa20.17■□□□□ 0.82
PSMC4-201ENST00000157812 RIMBP3Q9UFD9 1639 aa20.17■□□□□ 0.82
PSMC4-201ENST00000157812 PTPRGP23470 1445 aa20.16■□□□□ 0.82
PSMC4-201ENST00000157812 RAPGEF6Q8TEU7 1601 aa20.12■□□□□ 0.81
PSMC4-201ENST00000157812 PCF11O94913 1555 aaKnown RBP20.11■□□□□ 0.81
PSMC4-201ENST00000157812 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.11■□□□□ 0.81
PSMC4-201ENST00000157812 MAP3K1Q13233 1512 aa20.1■□□□□ 0.81
PSMC4-201ENST00000157812 FYCO1Q9BQS8 1478 aa20.08■□□□□ 0.81
PSMC4-201ENST00000157812 HECW1Q76N89 1606 aa20.08■□□□□ 0.8
PSMC4-201ENST00000157812 CASKIN1Q8WXD9 1431 aa20.07■□□□□ 0.8
PSMC4-201ENST00000157812 ABCA8O94911 1581 aa20.07■□□□□ 0.8
PSMC4-201ENST00000157812 PLB1Q6P1J6 1458 aa20.06■□□□□ 0.8
PSMC4-201ENST00000157812 DNAJC5Q9H3Z4 198 aa20.05■□□□□ 0.8
PSMC4-201ENST00000157812 ATP1B4Q9UN42 357 aaPredicted RBP20.05■□□□□ 0.8
PSMC4-201ENST00000157812 UACAQ9BZF9 1416 aa20.04■□□□□ 0.8
PSMC4-201ENST00000157812 LRRIQ1Q96JM4 1722 aa20.02■□□□□ 0.8
PSMC4-201ENST00000157812 ABCC2Q92887 1545 aa20.01■□□□□ 0.79
PSMC4-201ENST00000157812 UHRF1BP1LA0JNW5 1464 aa19.99■□□□□ 0.79
PSMC4-201ENST00000157812 RRBP1Q9P2E9 1410 aaKnown RBP19.98■□□□□ 0.79
PSMC4-201ENST00000157812 ADCY10Q96PN6 1610 aa19.98■□□□□ 0.79
PSMC4-201ENST00000157812 NUP153P49790 1475 aaKnown RBP19.98■□□□□ 0.79
PSMC4-201ENST00000157812 CCDC18Q5T9S5 1454 aa19.98■□□□□ 0.79
PSMC4-201ENST00000157812 CYB5RLQ6IPT4 315 aa19.97■□□□□ 0.79
PSMC4-201ENST00000157812 CFAP43Q8NDM7 1665 aa19.97■□□□□ 0.79
PSMC4-201ENST00000157812 EPRSP07814 1512 aaKnown RBP19.95■□□□□ 0.78
PSMC4-201ENST00000157812 TIAM1Q13009 1591 aa19.94■□□□□ 0.78
PSMC4-201ENST00000157812 ZCCHC11Q5TAX3 1644 aaKnown RBP19.93■□□□□ 0.78
PSMC4-201ENST00000157812 ARID3CA6NKF2 412 aa19.91■□□□□ 0.78
PSMC4-201ENST00000157812 CDK13Q14004 1512 aaKnown RBP19.91■□□□□ 0.78
PSMC4-201ENST00000157812 HNRNPUL2Q1KMD3 747 aaKnown RBP19.91■□□□□ 0.78
PSMC4-201ENST00000157812 CLSPNQ9HAW4 1339 aa19.9■□□□□ 0.78
PSMC4-201ENST00000157812 KDM5BQ9UGL1 1544 aa19.89■□□□□ 0.77
PSMC4-201ENST00000157812 ATP10BO94823 1461 aa19.89■□□□□ 0.77
PSMC4-201ENST00000157812 NPM1P06748 294 aaKnown RBP eCLIP19.88■□□□□ 0.77
PSMC4-201ENST00000157812 KANK4Q5T7N3 995 aaPredicted RBP19.87■□□□□ 0.77
PSMC4-201ENST00000157812 CDK11AQ9UQ88 783 aaPredicted RBP19.87■□□□□ 0.77
PSMC4-201ENST00000157812 CCNB3Q8WWL7 1395 aa19.84■□□□□ 0.77
PSMC4-201ENST00000157812 LRRC9Q6ZRR7 1453 aa19.82■□□□□ 0.76
PSMC4-201ENST00000157812 MTUS2Q5JR59 1369 aa19.81■□□□□ 0.76
PSMC4-201ENST00000157812 EHBP1L1Q8N3D4 1523 aa19.8■□□□□ 0.76
PSMC4-201ENST00000157812 PLEKHD1A6NEE1 506 aa19.79■□□□□ 0.76
PSMC4-201ENST00000157812 SUPT6HQ7KZ85 1726 aaKnown RBP19.78■□□□□ 0.76
PSMC4-201ENST00000157812 MAGI3Q5TCQ9 1506 aa19.77■□□□□ 0.76
PSMC4-201ENST00000157812 TROQ12816 1431 aaPredicted RBP19.76■□□□□ 0.75
PSMC4-201ENST00000157812 MAPKBP1O60336 1514 aa19.74■□□□□ 0.75
PSMC4-201ENST00000157812 ASXL2Q76L83 1435 aa19.74■□□□□ 0.75
PSMC4-201ENST00000157812 KIF14Q15058 1648 aa19.73■□□□□ 0.75
PSMC4-201ENST00000157812 WDR7Q9Y4E6 1490 aa19.73■□□□□ 0.75
PSMC4-201ENST00000157812 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.7■□□□□ 0.74
PSMC4-201ENST00000157812 DHX57Q6P158 1386 aaKnown RBP19.68■□□□□ 0.74
PSMC4-201ENST00000157812 KCNH8Q96L42 1107 aa19.67■□□□□ 0.74
PSMC4-201ENST00000157812 NCOA2Q15596 1464 aa19.66■□□□□ 0.74
PSMC4-201ENST00000157812 ZNF316A6NFI3 1004 aaPredicted RBP19.65■□□□□ 0.74
PSMC4-201ENST00000157812 ITSN2Q9NZM3 1697 aa19.63■□□□□ 0.73
PSMC4-201ENST00000157812 MYO5CQ9NQX4 1742 aa19.63■□□□□ 0.73
PSMC4-201ENST00000157812 DIEXFQ68CQ4 756 aaKnown RBP19.61■□□□□ 0.73
PSMC4-201ENST00000157812 PHLDB1Q86UU1 1377 aa19.61■□□□□ 0.73
PSMC4-201ENST00000157812 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.61■□□□□ 0.73
PSMC4-201ENST00000157812 CDC42BPAQ5VT25 1732 aa19.61■□□□□ 0.73
PSMC4-201ENST00000157812 ABCA9Q8IUA7 1624 aa19.61■□□□□ 0.73
PSMC4-201ENST00000157812 TTC37Q6PGP7 1564 aa19.61■□□□□ 0.73
PSMC4-201ENST00000157812 ABCC10Q5T3U5 1492 aa19.59■□□□□ 0.73
PSMC4-201ENST00000157812 DIP2BQ9P265 1576 aa19.58■□□□□ 0.73
PSMC4-201ENST00000157812 KIF13AQ9H1H9 1805 aa19.58■□□□□ 0.72
PSMC4-201ENST00000157812 GLI2P10070 1586 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms