RNA–Protein interactions for RNA: ENST00000157812.6

PSMC4-201, Transcript of proteasome 26S subunit, ATPase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSMC4, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC4-201ENST00000157812 NISCHQ9Y2I1 1504 aa29.87■■■□□ 2.37
PSMC4-201ENST00000157812 CCDC180Q9P1Z9 1646 aa26.4■■□□□ 1.82
PSMC4-201ENST00000157812 ABCC9O60706 1549 aa25.25■■□□□ 1.63
PSMC4-201ENST00000157812 ZCCHC6Q5VYS8 1495 aaKnown RBP24.99■■□□□ 1.59
PSMC4-201ENST00000157812 DCAF8L2P0C7V8 631 aa24.78■■□□□ 1.56
PSMC4-201ENST00000157812 DCAF1Q9Y4B6 1507 aa24.74■■□□□ 1.55
PSMC4-201ENST00000157812 NACADO15069 1562 aa24.65■■□□□ 1.54
PSMC4-201ENST00000157812 MYO15BQ96JP2 1530 aa24.64■■□□□ 1.54
PSMC4-201ENST00000157812 RB1CC1Q8TDY2 1594 aa24.57■■□□□ 1.52
PSMC4-201ENST00000157812 SCRIBQ14160 1630 aa24.11■■□□□ 1.45
PSMC4-201ENST00000157812 UNC13AQ9UPW8 1703 aa24.1■■□□□ 1.45
PSMC4-201ENST00000157812 SHROOM4Q9ULL8 1493 aa23.93■■□□□ 1.42
PSMC4-201ENST00000157812 BICRAQ9NZM4 1560 aa23.76■■□□□ 1.39
PSMC4-201ENST00000157812 PABPN1Q86U42 306 aaKnown RBP eCLIP23.66■■□□□ 1.38
PSMC4-201ENST00000157812 CECR2Q9BXF3 1484 aa23.18■■□□□ 1.3
PSMC4-201ENST00000157812 BAZ1AQ9NRL2 1556 aaPredicted RBP23.15■■□□□ 1.3
PSMC4-201ENST00000157812 EIF4G1Q04637 1599 aaKnown RBP23.11■■□□□ 1.29
PSMC4-201ENST00000157812 SMARCA4P51532 1647 aa23.1■■□□□ 1.29
PSMC4-201ENST00000157812 SUPT5HO00267 1087 aaKnown RBP23.03■■□□□ 1.28
PSMC4-201ENST00000157812 MROH2BQ7Z745 1585 aa23.02■■□□□ 1.28
PSMC4-201ENST00000157812 RSF1Q96T23 1441 aaPredicted RBP22.93■■□□□ 1.26
PSMC4-201ENST00000157812 CC2D2AQ9P2K1 1620 aa22.9■■□□□ 1.26
PSMC4-201ENST00000157812 WIZO95785 1651 aa22.86■■□□□ 1.25
PSMC4-201ENST00000157812 SMARCA2P51531 1590 aa22.84■■□□□ 1.25
PSMC4-201ENST00000157812 PEG3Q9GZU2 1588 aa22.84■■□□□ 1.25
PSMC4-201ENST00000157812 ATAD2BQ9ULI0 1458 aa22.79■■□□□ 1.24
PSMC4-201ENST00000157812 NCAPD3P42695 1498 aa22.69■■□□□ 1.22
PSMC4-201ENST00000157812 BAZ1BQ9UIG0 1483 aaKnown RBP22.67■■□□□ 1.22
PSMC4-201ENST00000157812 HMGXB3Q12766 1538 aa22.67■■□□□ 1.22
PSMC4-201ENST00000157812 TOP2AP11388 1531 aaKnown RBP22.62■■□□□ 1.21
PSMC4-201ENST00000157812 DNAJC5BQ9UF47 199 aa22.61■■□□□ 1.21
PSMC4-201ENST00000157812 CHIC1Q5VXU3 224 aa22.44■■□□□ 1.18
PSMC4-201ENST00000157812 CCDC88BA6NC98 1476 aa22.33■■□□□ 1.17
PSMC4-201ENST00000157812 PRDM2Q13029 1718 aa22.09■■□□□ 1.13
PSMC4-201ENST00000157812 LAMC3Q9Y6N6 1575 aa22.07■■□□□ 1.12
PSMC4-201ENST00000157812 CADPSQ9ULU8 1353 aa22.06■■□□□ 1.12
PSMC4-201ENST00000157812 CFTRP13569 1480 aa22.04■■□□□ 1.12
PSMC4-201ENST00000157812 NESP48681 1621 aa22■■□□□ 1.11
PSMC4-201ENST00000157812 PDS5BQ9NTI5 1447 aa21.88■■□□□ 1.09
PSMC4-201ENST00000157812 KIF21AQ7Z4S6 1674 aa21.85■■□□□ 1.09
PSMC4-201ENST00000157812 FANCD2Q9BXW9 1451 aa21.83■■□□□ 1.09
PSMC4-201ENST00000157812 CEP164Q9UPV0 1460 aa21.78■■□□□ 1.08
PSMC4-201ENST00000157812 ERCC6Q03468 1493 aa21.76■■□□□ 1.07
PSMC4-201ENST00000157812 ABCC8Q09428 1581 aa21.7■■□□□ 1.07
PSMC4-201ENST00000157812 TRIM41Q8WV44 630 aa21.7■■□□□ 1.06
PSMC4-201ENST00000157812 WRNQ14191 1432 aaPredicted RBP eCLIP21.64■■□□□ 1.06
PSMC4-201ENST00000157812 MRC2Q9UBG0 1479 aa21.62■■□□□ 1.05
PSMC4-201ENST00000157812 DNMBPQ6XZF7 1577 aa21.59■■□□□ 1.05
PSMC4-201ENST00000157812 THOC2Q8NI27 1593 aaKnown RBP21.59■■□□□ 1.05
PSMC4-201ENST00000157812 BIVM-ERCC5R4GMW8 1640 aa21.58■■□□□ 1.05
PSMC4-201ENST00000157812 CUX1P39880 1505 aa21.58■■□□□ 1.04
PSMC4-201ENST00000157812 SYNJ1O43426 1573 aa21.57■■□□□ 1.04
PSMC4-201ENST00000157812 TOP2BQ02880 1626 aa21.57■■□□□ 1.04
PSMC4-201ENST00000157812 URB2Q14146 1524 aaKnown RBP21.57■■□□□ 1.04
PSMC4-201ENST00000157812 TOPBP1Q92547 1522 aa21.55■■□□□ 1.04
PSMC4-201ENST00000157812 WDR62O43379 1518 aa21.53■■□□□ 1.04
PSMC4-201ENST00000157812 LOC105371045A0A1W2PR82 267 aa21.49■■□□□ 1.03
PSMC4-201ENST00000157812 FGD5Q6ZNL6 1462 aa21.43■■□□□ 1.02
PSMC4-201ENST00000157812 POLA1P09884 1462 aaPredicted RBP21.39■■□□□ 1.01
PSMC4-201ENST00000157812 SOGA1O94964 1423 aa21.32■■□□□ 1
PSMC4-201ENST00000157812 CUX2O14529 1486 aa21.31■■□□□ 1
PSMC4-201ENST00000157812 TARBP1Q13395 1621 aaKnown RBP21.28■■□□□ 1
PSMC4-201ENST00000157812 IFT140Q96RY7 1462 aa21.28■■□□□ 1
PSMC4-201ENST00000157812 RAD54L2Q9Y4B4 1467 aa21.28■■□□□ 1
PSMC4-201ENST00000157812 WDR97A6NE52 1622 aa21.28■■□□□ 1
PSMC4-201ENST00000157812 EEA1Q15075 1411 aa21.24■□□□□ 0.99
PSMC4-201ENST00000157812 ABCA10Q8WWZ4 1543 aa21.24■□□□□ 0.99
PSMC4-201ENST00000157812 PCGF6Q9BYE7 350 aa21.21■□□□□ 0.99
PSMC4-201ENST00000157812 HRCP23327 699 aa21.19■□□□□ 0.98
PSMC4-201ENST00000157812 FAM9AQ8IZU1 332 aaPredicted RBP21.19■□□□□ 0.98
PSMC4-201ENST00000157812 TRIM26Q12899 539 aaPredicted RBP21.19■□□□□ 0.98
PSMC4-201ENST00000157812 KIF27Q86VH2 1401 aa21.16■□□□□ 0.98
PSMC4-201ENST00000157812 ABCA5Q8WWZ7 1642 aa21.14■□□□□ 0.97
PSMC4-201ENST00000157812 EIF4G3O43432 1585 aaKnown RBP21.12■□□□□ 0.97
PSMC4-201ENST00000157812 ZNF608Q9ULD9 1512 aaPredicted RBP21.12■□□□□ 0.97
PSMC4-201ENST00000157812 TDRD9Q8NDG6 1382 aaKnown RBP21.12■□□□□ 0.97
PSMC4-201ENST00000157812 PBRM1Q86U86 1689 aa21.11■□□□□ 0.97
PSMC4-201ENST00000157812 GAPVD1Q14C86 1478 aa21.09■□□□□ 0.97
PSMC4-201ENST00000157812 RUSC2Q8N2Y8 1516 aa21.09■□□□□ 0.97
PSMC4-201ENST00000157812 AQRO60306 1485 aaKnown RBP eCLIP21.07■□□□□ 0.963e-7■■■■□ 23.9
PSMC4-201ENST00000157812 ERICH3Q5RHP9 1530 aa21.02■□□□□ 0.96
PSMC4-201ENST00000157812 GRIN2BQ13224 1484 aa21.01■□□□□ 0.95
PSMC4-201ENST00000157812 CSRNP3Q8WYN3 585 aa20.98■□□□□ 0.95
PSMC4-201ENST00000157812 CUL7Q14999 1698 aa20.98■□□□□ 0.95
PSMC4-201ENST00000157812 IGF1RP08069 1367 aa20.96■□□□□ 0.95
PSMC4-201ENST00000157812 TNIKQ9UKE5 1360 aa20.94■□□□□ 0.94
PSMC4-201ENST00000157812 SNAPC4Q5SXM2 1469 aa20.91■□□□□ 0.94
PSMC4-201ENST00000157812 MAGI1Q96QZ7 1491 aaPredicted RBP20.91■□□□□ 0.94
PSMC4-201ENST00000157812 GOLGA3Q08378 1498 aa20.89■□□□□ 0.94
PSMC4-201ENST00000157812 ADAMTS12P58397 1594 aa20.89■□□□□ 0.94
PSMC4-201ENST00000157812 KIF21BO75037 1637 aa20.88■□□□□ 0.93
PSMC4-201ENST00000157812 CARMIL1Q5VZK9 1371 aa20.88■□□□□ 0.93
PSMC4-201ENST00000157812 FHAD1B1AJZ9 1412 aa20.86■□□□□ 0.93
PSMC4-201ENST00000157812 PRXQ9BXM0 1461 aa20.85■□□□□ 0.93
PSMC4-201ENST00000157812 RAPGEF2Q9Y4G8 1499 aa20.83■□□□□ 0.93
PSMC4-201ENST00000157812 CEP162Q5TB80 1403 aa20.83■□□□□ 0.93
PSMC4-201ENST00000157812 SYNJ2O15056 1496 aa20.81■□□□□ 0.92
PSMC4-201ENST00000157812 CHD1O14646 1710 aa20.8■□□□□ 0.92
PSMC4-201ENST00000157812 CHMP7Q8WUX9 453 aaPredicted RBP20.77■□□□□ 0.92
PSMC4-201ENST00000157812 EHMT2Q96KQ7 1210 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms