RNA–Protein interactions for RNA: ENSMUST00000202769.1

Trim54-202, Transcript of Tripartite motif-containing protein 54, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Trim54, Length 1,408 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54-202ENSMUST00000202769 Abcc1O35379 1528 aa27.9■■■□□ 2.06
Trim54-202ENSMUST00000202769 Arhgef5E9Q7D5 1581 aa27.85■■■□□ 2.05
Trim54-202ENSMUST00000202769 Zeb1Q64318 1117 aa27.84■■■□□ 2.05
Trim54-202ENSMUST00000202769 Gm156Q58A37 223 aa27.83■■■□□ 2.05
Trim54-202ENSMUST00000202769 Dnmt1P13864 1620 aaKnown RBP27.82■■■□□ 2.04
Trim54-202ENSMUST00000202769 Abca16E9PWJ7 1678 aa27.81■■■□□ 2.04
Trim54-202ENSMUST00000202769 CadpsQ80TJ1 1355 aa27.79■■■□□ 2.04
Trim54-202ENSMUST00000202769 Abcc2Q8VI47 1543 aa27.79■■■□□ 2.04
Trim54-202ENSMUST00000202769 Chd1P40201 1711 aa27.79■■■□□ 2.04
Trim54-202ENSMUST00000202769 TchhA0A0B4J1F9 1599 aa27.78■■■□□ 2.04
Trim54-202ENSMUST00000202769 Mroh2bQ7M6Y6 1581 aa27.78■■■□□ 2.04
Trim54-202ENSMUST00000202769 WizO88286 1684 aaKnown RBP27.76■■■□□ 2.03
Trim54-202ENSMUST00000202769 PxdnQ3UQ28 1475 aa27.75■■■□□ 2.03
Trim54-202ENSMUST00000202769 PtprtQ99M80 1454 aa27.75■■■□□ 2.03
Trim54-202ENSMUST00000202769 Ythdc2B2RR83 1445 aaKnown RBP27.75■■■□□ 2.03
Trim54-202ENSMUST00000202769 Adamts12Q811B3 1600 aa27.74■■■□□ 2.03
Trim54-202ENSMUST00000202769 Map3k4O08648 1597 aa27.74■■■□□ 2.03
Trim54-202ENSMUST00000202769 EprsQ8CGC7 1512 aaKnown RBP27.72■■■□□ 2.03
Trim54-202ENSMUST00000202769 BC005561E9Q5E2 1589 aa27.72■■■□□ 2.03
Trim54-202ENSMUST00000202769 Neo1P97798 1493 aa27.7■■■□□ 2.03
Trim54-202ENSMUST00000202769 Ttbk1Q6PCN3 1308 aa27.69■■■□□ 2.02
Trim54-202ENSMUST00000202769 Soga1E1U8D0 1418 aa27.68■■■□□ 2.02
Trim54-202ENSMUST00000202769 Arhgap27A2AB59 869 aa27.67■■■□□ 2.02
Trim54-202ENSMUST00000202769 Rapgef2Q8CHG7 1496 aa27.67■■■□□ 2.02
Trim54-202ENSMUST00000202769 Npm2Q80W85 207 aa27.66■■■□□ 2.02
Trim54-202ENSMUST00000202769 Pprc1Q6NZN1 1644 aa27.64■■■□□ 2.02
Trim54-202ENSMUST00000202769 Pcdh10E9PXQ7 1057 aa27.63■■■□□ 2.01
Trim54-202ENSMUST00000202769 Eif4g1Q6NZJ6 1600 aaKnown RBP27.6■■■□□ 2.01
Trim54-202ENSMUST00000202769 Gm14025A2AP89 1413 aa27.6■■■□□ 2.01
Trim54-202ENSMUST00000202769 Carmil1Q6EDY6 1374 aa27.57■■■□□ 2
Trim54-202ENSMUST00000202769 Slx4Q6P1D7 1565 aa27.55■■■□□ 2
Trim54-202ENSMUST00000202769 Map3k1P53349 1493 aa27.55■■■□□ 2
Trim54-202ENSMUST00000202769 Setbp1Q9Z180 1582 aa27.52■■■□□ 2
Trim54-202ENSMUST00000202769 Arhgap35Q91YM2 1499 aa27.52■■■□□ 2
Trim54-202ENSMUST00000202769 Arhgef12Q8R4H2 1543 aaKnown RBP27.49■■□□□ 1.99
Trim54-202ENSMUST00000202769 Rpap1Q80TE0 1409 aa27.48■■□□□ 1.99
Trim54-202ENSMUST00000202769 Gm7298A0A0N4SVU1 1476 aa27.47■■□□□ 1.99
Trim54-202ENSMUST00000202769 AI481877A2ALV5 1481 aa27.45■■□□□ 1.98
Trim54-202ENSMUST00000202769 Abca5Q8K448 1642 aa27.42■■□□□ 1.98
Trim54-202ENSMUST00000202769 Polr1aO35134 1717 aaKnown RBP27.4■■□□□ 1.98
Trim54-202ENSMUST00000202769 Gab3Q8BSM5 595 aa27.37■■□□□ 1.97
Trim54-202ENSMUST00000202769 Ak9G3UYQ4 1894 aa27.37■■□□□ 1.97
Trim54-202ENSMUST00000202769 Jph4Q80WT0 628 aa27.35■■□□□ 1.97
Trim54-202ENSMUST00000202769 HrcG5E8J6 738 aa27.3■■□□□ 1.96
Trim54-202ENSMUST00000202769 Cux1P53564 1515 aa27.29■■□□□ 1.96
Trim54-202ENSMUST00000202769 WrnO09053 1401 aa27.26■■□□□ 1.95
Trim54-202ENSMUST00000202769 Clip1Q922J3 1391 aa27.25■■□□□ 1.95
Trim54-202ENSMUST00000202769 Cep162Q6ZQ06 1403 aa27.25■■□□□ 1.95
Trim54-202ENSMUST00000202769 Ppp1r18Q8BQ30 594 aa27.24■■□□□ 1.95
Trim54-202ENSMUST00000202769 Rrbp1Q99PL5 1605 aaKnown RBP27.22■■□□□ 1.95
Trim54-202ENSMUST00000202769 Ifnlr1Q8CGK5 535 aa27.2■■□□□ 1.94
Trim54-202ENSMUST00000202769 Fyco1Q8VDC1 1437 aa27.17■■□□□ 1.94
Trim54-202ENSMUST00000202769 Fkbp15Q6P9Q6 1216 aaKnown RBP27.16■■□□□ 1.94
Trim54-202ENSMUST00000202769 Clasp1Q80TV8 1535 aaKnown RBP27.16■■□□□ 1.94
Trim54-202ENSMUST00000202769 Kdm5bQ80Y84 1544 aa27.16■■□□□ 1.94
Trim54-202ENSMUST00000202769 Lrrc9Q8CDN9 1456 aa27.12■■□□□ 1.93
Trim54-202ENSMUST00000202769 Igf1rQ60751 1373 aa27.11■■□□□ 1.93
Trim54-202ENSMUST00000202769 Ttc37F8VPK0 1563 aa27.09■■□□□ 1.93
Trim54-202ENSMUST00000202769 Myt1lP97500 1187 aa27.06■■□□□ 1.92
Trim54-202ENSMUST00000202769 AdgbG3UZ78 1657 aa27.04■■□□□ 1.92
Trim54-202ENSMUST00000202769 Znf608Q56A10 1511 aa27.03■■□□□ 1.92
Trim54-202ENSMUST00000202769 Mapkbp1Q6NS57 1503 aa27.03■■□□□ 1.92
Trim54-202ENSMUST00000202769 Arhgap31A6X8Z5 1425 aa27.03■■□□□ 1.92
Trim54-202ENSMUST00000202769 Arid3cA6PWV5 409 aa27.02■■□□□ 1.92
Trim54-202ENSMUST00000202769 Wdr7Q920I9 1489 aa27.01■■□□□ 1.91
Trim54-202ENSMUST00000202769 NhsB1AV60 1647 aa27.01■■□□□ 1.91
Trim54-202ENSMUST00000202769 Cul7Q8VE73 1689 aa27■■□□□ 1.91
Trim54-202ENSMUST00000202769 Ankrd26Q811D2 1581 aa27■■□□□ 1.91
Trim54-202ENSMUST00000202769 Ccdc141E9Q8Q6 1531 aa27■■□□□ 1.91
Trim54-202ENSMUST00000202769 Depdc5P61460 1591 aa26.97■■□□□ 1.91
Trim54-202ENSMUST00000202769 Zfyve16Q80U44 1528 aa26.92■■□□□ 1.9
Trim54-202ENSMUST00000202769 Mroh2aD3Z750 1679 aa26.89■■□□□ 1.89
Trim54-202ENSMUST00000202769 Atp10dQ8K2X1 1416 aa26.87■■□□□ 1.89
Trim54-202ENSMUST00000202769 Gcc2Q8CHG3 1679 aa26.85■■□□□ 1.89
Trim54-202ENSMUST00000202769 Rapgef6Q5NCJ1 1609 aa26.85■■□□□ 1.89
Trim54-202ENSMUST00000202769 Arhgef11Q68FM7 1552 aa26.83■■□□□ 1.89
Trim54-202ENSMUST00000202769 BlmO88700 1416 aa26.83■■□□□ 1.89
Trim54-202ENSMUST00000202769 Ncoa2Q61026 1462 aa26.81■■□□□ 1.88
Trim54-202ENSMUST00000202769 Aebp1Q640N1 1128 aa26.81■■□□□ 1.88
Trim54-202ENSMUST00000202769 Kiaa1210E9Q0C6 1637 aa26.8■■□□□ 1.88
Trim54-202ENSMUST00000202769 Fndc1E9Q043 1732 aa26.78■■□□□ 1.88
Trim54-202ENSMUST00000202769 Fancd2Q80V62 1450 aa26.78■■□□□ 1.88
Trim54-202ENSMUST00000202769 Erich3F6QRE9 1637 aa26.77■■□□□ 1.88
Trim54-202ENSMUST00000202769 AglF8VPN4 1532 aa26.77■■□□□ 1.88
Trim54-202ENSMUST00000202769 Kif27Q7M6Z4 1394 aa26.76■■□□□ 1.87
Trim54-202ENSMUST00000202769 Abca8bQ8K440 1620 aa26.75■■□□□ 1.87
Trim54-202ENSMUST00000202769 Lmo7E9PYF4 1699 aaKnown RBP26.75■■□□□ 1.87
Trim54-202ENSMUST00000202769 Arap1Q4LDD4 1452 aa26.74■■□□□ 1.87
Trim54-202ENSMUST00000202769 Setd5Q5XJV7 1441 aa26.71■■□□□ 1.87
Trim54-202ENSMUST00000202769 Magi1Q6RHR9 1471 aa26.69■■□□□ 1.86
Trim54-202ENSMUST00000202769 Pcf11G3X9Z4 1553 aa26.67■■□□□ 1.86
Trim54-202ENSMUST00000202769 Plekhg3Q4VAC9 1341 aa26.63■■□□□ 1.85
Trim54-202ENSMUST00000202769 Prex2Q3LAC4 1598 aa26.62■■□□□ 1.85
Trim54-202ENSMUST00000202769 Eea1Q8BL66 1411 aa26.62■■□□□ 1.85
Trim54-202ENSMUST00000202769 Alpk3Q924C5 1678 aa26.61■■□□□ 1.85
Trim54-202ENSMUST00000202769 A2mQ6GQT1 1474 aa26.57■■□□□ 1.84
Trim54-202ENSMUST00000202769 Ncoa3O09000 1398 aa26.56■■□□□ 1.84
Trim54-202ENSMUST00000202769 Dnajc5gQ8C632 165 aa26.56■■□□□ 1.84
Trim54-202ENSMUST00000202769 Ap3b1Q9Z1T1 1105 aa26.56■■□□□ 1.84
Trim54-202ENSMUST00000202769 Plppr3Q7TPB0 716 aa26.51■■□□□ 1.83
Retrieved 100 of 22,080 RNA–protein pairs in 30.6 ms