RNA–Protein interactions for RNA: ENSMUST00000167755.2

Trim9-203, Transcript of E3 ubiquitin-protein ligase TRIM9, mousemouse

TSL 1 (best) BASIC

Gene Trim9, Length 4,559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9-203ENSMUST00000167755 Rapgef2Q8CHG7 1496 aa12.9□□□□□ -0.35
Trim9-203ENSMUST00000167755 Fmn1Q05860 1466 aa12.89□□□□□ -0.35
Trim9-203ENSMUST00000167755 Eif5bQ05D44 1216 aaKnown RBP12.88□□□□□ -0.35
Trim9-203ENSMUST00000167755 Arid3cA6PWV5 409 aa12.84□□□□□ -0.35
Trim9-203ENSMUST00000167755 NeflP08551 543 aa12.84□□□□□ -0.35
Trim9-203ENSMUST00000167755 Eea1Q8BL66 1411 aa12.83□□□□□ -0.36
Trim9-203ENSMUST00000167755 Cux2P70298 1426 aa12.83□□□□□ -0.36
Trim9-203ENSMUST00000167755 Smarca4Q3TKT4 1613 aaKnown RBP12.82□□□□□ -0.36
Trim9-203ENSMUST00000167755 P3h3Q8CG70 732 aa12.82□□□□□ -0.36
Trim9-203ENSMUST00000167755 Tnnt3Q9QZ47 272 aa12.82□□□□□ -0.36
Trim9-203ENSMUST00000167755 Phldb1Q6PDH0 1371 aaKnown RBP12.82□□□□□ -0.36
Trim9-203ENSMUST00000167755 Ppp1r18Q8BQ30 594 aa12.81□□□□□ -0.36
Trim9-203ENSMUST00000167755 BicraF8VPZ9 1578 aa12.8□□□□□ -0.36
Trim9-203ENSMUST00000167755 Cttnbp2B9EJA2 1648 aa12.79□□□□□ -0.36
Trim9-203ENSMUST00000167755 Atad2bE9Q166 1460 aaKnown RBP12.78□□□□□ -0.36
Trim9-203ENSMUST00000167755 Cc2d2aQ8CFW7 1633 aa12.78□□□□□ -0.36
Trim9-203ENSMUST00000167755 AknaQ80VW7 1404 aa12.77□□□□□ -0.36
Trim9-203ENSMUST00000167755 MyclP10166 368 aa12.77□□□□□ -0.37
Trim9-203ENSMUST00000167755 Clstn2Q9ER65 966 aa12.75□□□□□ -0.37
Trim9-203ENSMUST00000167755 Amer1Q7TS75 1132 aa12.74□□□□□ -0.37
Trim9-203ENSMUST00000167755 Hdac5Q9Z2V6 1113 aa12.73□□□□□ -0.37
Trim9-203ENSMUST00000167755 Rrp7aQ9D1C9 280 aaKnown RBP12.72□□□□□ -0.37
Trim9-203ENSMUST00000167755 Ccer2J3QPU5 274 aa12.72□□□□□ -0.37
Trim9-203ENSMUST00000167755 DiexfQ8BTT6 772 aaKnown RBP12.71□□□□□ -0.38
Trim9-203ENSMUST00000167755 Iqgap2Q3UQ44 1575 aa12.71□□□□□ -0.38
Trim9-203ENSMUST00000167755 Rgl3Q3UYI5 709 aa12.67□□□□□ -0.38
Trim9-203ENSMUST00000167755 Nlrp6Q91WS2 869 aa12.67□□□□□ -0.38
Trim9-203ENSMUST00000167755 Hspa5P20029 655 aaKnown RBP12.67□□□□□ -0.38
Trim9-203ENSMUST00000167755 Kdm2aP59997 1161 aa12.64□□□□□ -0.39
Trim9-203ENSMUST00000167755 Baz1bQ9Z277 1479 aa12.64□□□□□ -0.39
Trim9-203ENSMUST00000167755 Aebp1Q640N1 1128 aa12.62□□□□□ -0.39
Trim9-203ENSMUST00000167755 Rpap1Q80TE0 1409 aa12.62□□□□□ -0.39
Trim9-203ENSMUST00000167755 Kif27Q7M6Z4 1394 aa12.61□□□□□ -0.39
Trim9-203ENSMUST00000167755 Grwd1Q810D6 446 aaKnown RBP12.6□□□□□ -0.39
Trim9-203ENSMUST00000167755 Top2aQ01320 1528 aaKnown RBP12.58□□□□□ -0.39
Trim9-203ENSMUST00000167755 LrpprcQ6PB66 1392 aaKnown RBP12.58□□□□□ -0.4
Trim9-203ENSMUST00000167755 Dhx29Q6PGC1 1365 aaKnown RBP12.57□□□□□ -0.4
Trim9-203ENSMUST00000167755 Stk24Q99KH8 431 aa12.57□□□□□ -0.4
Trim9-203ENSMUST00000167755 Pabpn1Q8CCS6 302 aaKnown RBP12.57□□□□□ -0.4
Trim9-203ENSMUST00000167755 Polr3glQ8R0C0 218 aa12.57□□□□□ -0.4
Trim9-203ENSMUST00000167755 Mroh3A0A1D5RM54 893 aa12.56□□□□□ -0.4
Trim9-203ENSMUST00000167755 MlecQ6ZQI3 291 aaKnown RBP12.56□□□□□ -0.4
Trim9-203ENSMUST00000167755 PtprkP35822 1457 aa12.56□□□□□ -0.4
Trim9-203ENSMUST00000167755 Sin3aQ60520 1274 aaKnown RBP12.56□□□□□ -0.4
Trim9-203ENSMUST00000167755 Mtus2Q3UHD3 1353 aa12.55□□□□□ -0.4
Trim9-203ENSMUST00000167755 Top2bQ64511 1612 aa12.55□□□□□ -0.4
Trim9-203ENSMUST00000167755 Rangap1P46061 589 aaKnown RBP12.54□□□□□ -0.4
Trim9-203ENSMUST00000167755 Mrs2Q5NCE8 434 aa12.53□□□□□ -0.4
Trim9-203ENSMUST00000167755 Rtl5Q5DTT4 599 aa12.52□□□□□ -0.4
Trim9-203ENSMUST00000167755 Dnajc5bQ9CQ94 199 aa12.52□□□□□ -0.4
Trim9-203ENSMUST00000167755 SafbD3YXK2 937 aaKnown RBP12.52□□□□□ -0.4
Trim9-203ENSMUST00000167755 Lemd3Q9WU40 921 aa12.52□□□□□ -0.41
Trim9-203ENSMUST00000167755 Anp32aO35381 247 aa12.5□□□□□ -0.41
Trim9-203ENSMUST00000167755 Arhgap35Q91YM2 1499 aa12.5□□□□□ -0.41
Trim9-203ENSMUST00000167755 Srpk2O54781 681 aaKnown RBP12.48□□□□□ -0.41
Trim9-203ENSMUST00000167755 NgefQ8CHT1 710 aa12.48□□□□□ -0.41
Trim9-203ENSMUST00000167755 Gm20521D3Z5F7 333 aa12.47□□□□□ -0.41
Trim9-203ENSMUST00000167755 Frmpd1A2AKB4 1549 aa12.47□□□□□ -0.41
Trim9-203ENSMUST00000167755 Cabp1Q9JLK7 227 aa12.46□□□□□ -0.42
Trim9-203ENSMUST00000167755 Arap1Q4LDD4 1452 aa12.45□□□□□ -0.42
Trim9-203ENSMUST00000167755 Map4P27546 1125 aaKnown RBP12.44□□□□□ -0.42
Trim9-203ENSMUST00000167755 4930567H17RikQ3V0K5 233 aa12.44□□□□□ -0.42
Trim9-203ENSMUST00000167755 IqubQ8CDK3 788 aa12.44□□□□□ -0.42
Trim9-203ENSMUST00000167755 4933416C03RikQ3V063 378 aa12.43□□□□□ -0.42
Trim9-203ENSMUST00000167755 Carmil1Q6EDY6 1374 aa12.42□□□□□ -0.42
Trim9-203ENSMUST00000167755 Calr4Q3TQS0 420 aa12.42□□□□□ -0.42
Trim9-203ENSMUST00000167755 Rad21Q61550 635 aaKnown RBP12.42□□□□□ -0.42
Trim9-203ENSMUST00000167755 Shroom4Q1W617 1475 aa12.42□□□□□ -0.42
Trim9-203ENSMUST00000167755 CntlnA2AM05 1397 aa12.41□□□□□ -0.42
Trim9-203ENSMUST00000167755 Arid4bA2CG63 1314 aaKnown RBP12.4□□□□□ -0.42
Trim9-203ENSMUST00000167755 Fyco1Q8VDC1 1437 aa12.4□□□□□ -0.42
Trim9-203ENSMUST00000167755 Fam71e1A1L3C1 212 aa12.4□□□□□ -0.42
Trim9-203ENSMUST00000167755 Kif3bQ61771 747 aa12.4□□□□□ -0.42
Trim9-203ENSMUST00000167755 Exosc9Q9JHI7 438 aaKnown RBP12.4□□□□□ -0.43
Trim9-203ENSMUST00000167755 Mia2Q91ZV0 1396 aa12.39□□□□□ -0.43
Trim9-203ENSMUST00000167755 Rad54l2Q99NG0 1466 aa12.38□□□□□ -0.43
Trim9-203ENSMUST00000167755 Wwc2Q6NXJ0 1187 aa12.38□□□□□ -0.43
Trim9-203ENSMUST00000167755 Pkd2O35245 966 aa12.38□□□□□ -0.43
Trim9-203ENSMUST00000167755 Trak1Q6PD31 939 aa12.38□□□□□ -0.43
Trim9-203ENSMUST00000167755 Sart1Q9Z315 806 aaKnown RBP12.38□□□□□ -0.43
Trim9-203ENSMUST00000167755 Ccnb3Q810T2 1396 aa12.37□□□□□ -0.43
Trim9-203ENSMUST00000167755 Jph4Q80WT0 628 aa12.37□□□□□ -0.43
Trim9-203ENSMUST00000167755 Ppp4r2Q0VGB7 417 aa12.36□□□□□ -0.43
Trim9-203ENSMUST00000167755 Card11Q8CIS0 1159 aa12.36□□□□□ -0.43
Trim9-203ENSMUST00000167755 Irx6Q9ER75 438 aa12.36□□□□□ -0.43
Trim9-203ENSMUST00000167755 Soga1E1U8D0 1418 aa12.36□□□□□ -0.43
Trim9-203ENSMUST00000167755 WrnO09053 1401 aa12.36□□□□□ -0.43
Trim9-203ENSMUST00000167755 Stag3O70576 1240 aa12.36□□□□□ -0.43
Trim9-203ENSMUST00000167755 Mphosph9A6H5Y1 991 aa12.36□□□□□ -0.43
Trim9-203ENSMUST00000167755 Naip1Q9QWK5 1403 aa12.36□□□□□ -0.43
Trim9-203ENSMUST00000167755 Ncapd3Q6ZQK0 1506 aa12.35□□□□□ -0.43
Trim9-203ENSMUST00000167755 Stk26Q99JT2 416 aa12.35□□□□□ -0.43
Trim9-203ENSMUST00000167755 Cnga1P29974 684 aa12.34□□□□□ -0.43
Trim9-203ENSMUST00000167755 Urb2E9Q7L1 1524 aaKnown RBP12.34□□□□□ -0.43
Trim9-203ENSMUST00000167755 Txndc2Q6P902 515 aa12.32□□□□□ -0.44
Trim9-203ENSMUST00000167755 Grin2bQ01097 1482 aa12.31□□□□□ -0.44
Trim9-203ENSMUST00000167755 Wdr62Q3U3T8 1523 aa12.3□□□□□ -0.44
Trim9-203ENSMUST00000167755 Duox2A2AQ99 1517 aa12.29□□□□□ -0.44
Trim9-203ENSMUST00000167755 Trim26Q99PN3 545 aa12.29□□□□□ -0.44
Trim9-203ENSMUST00000167755 AqrQ8CFQ3 1481 aaKnown RBP12.29□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 379.4 ms