RNA–Protein interactions for RNA: ENSMUST00000167755.2

Trim9-203, Transcript of E3 ubiquitin-protein ligase TRIM9, mousemouse

TSL 1 (best) BASIC

Gene Trim9, Length 4,559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9-203ENSMUST00000167755 Rhox8Q6VSS7 320 aa17.05■□□□□ 0.32
Trim9-203ENSMUST00000167755 NischQ80TM9 1593 aa15.99■□□□□ 0.15
Trim9-203ENSMUST00000167755 Ccdc136Q3TVA9 1136 aa15.37■□□□□ 0.05
Trim9-203ENSMUST00000167755 Esf1Q3V1V3 845 aaKnown RBP15.21■□□□□ 0.03
Trim9-203ENSMUST00000167755 Abcc9P70170 1546 aa15.18■□□□□ 0.02
Trim9-203ENSMUST00000167755 Ehmt2Q9Z148 1263 aaKnown RBP15.17■□□□□ 0.02
Trim9-203ENSMUST00000167755 Cngb1E1AZ71 1325 aa15.04■□□□□ -0
Trim9-203ENSMUST00000167755 Rpgrip1Q9EPQ2 1331 aa15.02■□□□□ -0
Trim9-203ENSMUST00000167755 Abcc8B2RUS7 1588 aa14.89□□□□□ -0.03
Trim9-203ENSMUST00000167755 Trim41Q5NCC3 630 aa14.83□□□□□ -0.03
Trim9-203ENSMUST00000167755 Gab3Q8BSM5 595 aa14.78□□□□□ -0.04
Trim9-203ENSMUST00000167755 Zeb1Q64318 1117 aa14.77□□□□□ -0.04
Trim9-203ENSMUST00000167755 Rtl1Q7M732 1744 aa14.76□□□□□ -0.05
Trim9-203ENSMUST00000167755 Gm35339A0A140LHH9 1649 aa14.69□□□□□ -0.06
Trim9-203ENSMUST00000167755 Ccdc180J3QNE4 1664 aa14.64□□□□□ -0.07
Trim9-203ENSMUST00000167755 Npm2Q80W85 207 aa14.64□□□□□ -0.07
Trim9-203ENSMUST00000167755 Myt1lP97500 1187 aa14.56□□□□□ -0.08
Trim9-203ENSMUST00000167755 Il27Q8K3I6 234 aa14.51□□□□□ -0.09
Trim9-203ENSMUST00000167755 Ube2uB1AUC4 352 aa14.42□□□□□ -0.1
Trim9-203ENSMUST00000167755 Zcchc6Q5BLK4 1491 aaKnown RBP14.39□□□□□ -0.11
Trim9-203ENSMUST00000167755 Acin1Q9JIX8 1338 aaKnown RBP14.34□□□□□ -0.11
Trim9-203ENSMUST00000167755 HrcG5E8J6 738 aa14.21□□□□□ -0.14
Trim9-203ENSMUST00000167755 Rb1cc1Q9ESK9 1588 aa14.04□□□□□ -0.16
Trim9-203ENSMUST00000167755 UbtfP25976 765 aaKnown RBP14□□□□□ -0.17
Trim9-203ENSMUST00000167755 Npm1Q61937 292 aaKnown RBP13.96□□□□□ -0.17
Trim9-203ENSMUST00000167755 Wdr66E9Q743 1299 aa13.95□□□□□ -0.18
Trim9-203ENSMUST00000167755 Ap3b1Q9Z1T1 1105 aa13.93□□□□□ -0.18
Trim9-203ENSMUST00000167755 Dcaf1Q80TR8 1506 aa13.93□□□□□ -0.18
Trim9-203ENSMUST00000167755 Las1lA2BE28 776 aaKnown RBP13.93□□□□□ -0.18
Trim9-203ENSMUST00000167755 Pcgf6Q99NA9 353 aa13.91□□□□□ -0.18
Trim9-203ENSMUST00000167755 Chic1Q8CBW7 227 aa13.86□□□□□ -0.19
Trim9-203ENSMUST00000167755 Ubl4bQ9CQ84 188 aa13.78□□□□□ -0.2
Trim9-203ENSMUST00000167755 Kdm5dQ62240 1548 aa13.77□□□□□ -0.21
Trim9-203ENSMUST00000167755 Ifnlr1Q8CGK5 535 aa13.74□□□□□ -0.21
Trim9-203ENSMUST00000167755 Baz1aO88379 1555 aa13.73□□□□□ -0.21
Trim9-203ENSMUST00000167755 Ppargc1bQ8VHJ7 1014 aa13.72□□□□□ -0.21
Trim9-203ENSMUST00000167755 NacadQ5SWP3 1504 aa13.71□□□□□ -0.21
Trim9-203ENSMUST00000167755 Supt5hO55201 1082 aaKnown RBP13.71□□□□□ -0.21
Trim9-203ENSMUST00000167755 Fam50aQ9WV03 339 aaKnown RBP13.7□□□□□ -0.22
Trim9-203ENSMUST00000167755 ScribQ80U72 1612 aa13.66□□□□□ -0.22
Trim9-203ENSMUST00000167755 Mier1Q5UAK0 511 aa13.64□□□□□ -0.23
Trim9-203ENSMUST00000167755 NefmP08553 848 aa13.63□□□□□ -0.23
Trim9-203ENSMUST00000167755 Lmod2Q3UHZ5 550 aa13.61□□□□□ -0.23
Trim9-203ENSMUST00000167755 Cep164Q5DU05 1446 aa13.61□□□□□ -0.23
Trim9-203ENSMUST00000167755 Fkbp15Q6P9Q6 1216 aaKnown RBP13.59□□□□□ -0.23
Trim9-203ENSMUST00000167755 Brd4Q9ESU6 1400 aaKnown RBP13.58□□□□□ -0.24
Trim9-203ENSMUST00000167755 Zbtb7cQ8VCZ7 619 aa13.57□□□□□ -0.24
Trim9-203ENSMUST00000167755 Neurod1Q60867 357 aa13.53□□□□□ -0.24
Trim9-203ENSMUST00000167755 Pelp1Q9DBD5 1123 aaKnown RBP13.52□□□□□ -0.24
Trim9-203ENSMUST00000167755 Plekhg3Q4VAC9 1341 aa13.52□□□□□ -0.24
Trim9-203ENSMUST00000167755 Plppr3Q7TPB0 716 aa13.49□□□□□ -0.25
Trim9-203ENSMUST00000167755 Slc24a1Q91WD8 1130 aa13.48□□□□□ -0.25
Trim9-203ENSMUST00000167755 Rsf1E9PWW9 1441 aaKnown RBP13.47□□□□□ -0.25
Trim9-203ENSMUST00000167755 Hnrnpul2Q00PI9 745 aaKnown RBP13.41□□□□□ -0.26
Trim9-203ENSMUST00000167755 Os9Q8K2C7 672 aa13.41□□□□□ -0.26
Trim9-203ENSMUST00000167755 Ttbk1Q6PCN3 1308 aa13.38□□□□□ -0.27
Trim9-203ENSMUST00000167755 Ccdc88bQ4QRL3 1481 aa13.36□□□□□ -0.27
Trim9-203ENSMUST00000167755 Golga3P55937 1487 aa13.35□□□□□ -0.27
Trim9-203ENSMUST00000167755 Cecr2E9Q2Z1 1453 aa13.33□□□□□ -0.28
Trim9-203ENSMUST00000167755 Gm13697A2AK42 830 aa13.33□□□□□ -0.28
Trim9-203ENSMUST00000167755 NclP09405 707 aaKnown RBP13.31□□□□□ -0.28
Trim9-203ENSMUST00000167755 Eid3Q3V124 375 aa13.31□□□□□ -0.28
Trim9-203ENSMUST00000167755 Sall2Q9QX96 1004 aa13.31□□□□□ -0.28
Trim9-203ENSMUST00000167755 Sycp2Q9CUU3 1500 aa13.3□□□□□ -0.28
Trim9-203ENSMUST00000167755 Kif15Q6P9L6 1387 aa13.29□□□□□ -0.28
Trim9-203ENSMUST00000167755 TonslQ6NZL6 1363 aa13.26□□□□□ -0.29
Trim9-203ENSMUST00000167755 Smarca2Q6DIC0 1577 aa13.24□□□□□ -0.29
Trim9-203ENSMUST00000167755 Clip1Q922J3 1391 aa13.24□□□□□ -0.29
Trim9-203ENSMUST00000167755 Cdk11bP24788 784 aaKnown RBP13.22□□□□□ -0.29
Trim9-203ENSMUST00000167755 Ercc6F8VPZ5 1481 aa13.21□□□□□ -0.29
Trim9-203ENSMUST00000167755 Nop58Q6DFW4 536 aaKnown RBP13.21□□□□□ -0.29
Trim9-203ENSMUST00000167755 Mapk8ip2Q9ERE9 830 aa13.21□□□□□ -0.29
Trim9-203ENSMUST00000167755 Anp32bQ9EST5 272 aaKnown RBP13.21□□□□□ -0.29
Trim9-203ENSMUST00000167755 Erich6D3Z6S9 713 aa13.2□□□□□ -0.3
Trim9-203ENSMUST00000167755 Myt1Q8CFC2 1127 aa13.17□□□□□ -0.3
Trim9-203ENSMUST00000167755 Zbtb4Q5F293 982 aa13.17□□□□□ -0.3
Trim9-203ENSMUST00000167755 Stra8P70278 393 aa13.16□□□□□ -0.3
Trim9-203ENSMUST00000167755 CenpbP27790 599 aa13.15□□□□□ -0.3
Trim9-203ENSMUST00000167755 Atp1b4Q99ME6 356 aa13.14□□□□□ -0.31
Trim9-203ENSMUST00000167755 Aebp2Q9Z248 504 aaKnown RBP13.12□□□□□ -0.31
Trim9-203ENSMUST00000167755 Synj1Q8CHC4 1574 aa13.11□□□□□ -0.31
Trim9-203ENSMUST00000167755 Anks4bQ8K3X6 423 aa13.11□□□□□ -0.31
Trim9-203ENSMUST00000167755 Crybg2B7ZCC2 1516 aa13.1□□□□□ -0.31
Trim9-203ENSMUST00000167755 Pds5bQ4VA53 1446 aaKnown RBP13.1□□□□□ -0.31
Trim9-203ENSMUST00000167755 CftrP26361 1476 aa13.09□□□□□ -0.31
Trim9-203ENSMUST00000167755 Chic2Q9D9G3 165 aa13.07□□□□□ -0.32
Trim9-203ENSMUST00000167755 Gm13695A2AK44 830 aa13.07□□□□□ -0.32
Trim9-203ENSMUST00000167755 Arhgap27A2AB59 869 aa13.06□□□□□ -0.32
Trim9-203ENSMUST00000167755 ClspnQ80YR7 1315 aa13.05□□□□□ -0.32
Trim9-203ENSMUST00000167755 NrdcQ8BHG1 1161 aa13.03□□□□□ -0.32
Trim9-203ENSMUST00000167755 Gm38655A0A286YDK6 273 aa13.02□□□□□ -0.33
Trim9-203ENSMUST00000167755 Prdm10Q3UTQ7 1184 aa13.01□□□□□ -0.33
Trim9-203ENSMUST00000167755 Ccdc18Q640L5 1455 aa13□□□□□ -0.33
Trim9-203ENSMUST00000167755 BlmO88700 1416 aa12.99□□□□□ -0.33
Trim9-203ENSMUST00000167755 Safb2Q80YR5 991 aaKnown RBP12.98□□□□□ -0.33
Trim9-203ENSMUST00000167755 Setd5Q5XJV7 1441 aa12.97□□□□□ -0.33
Trim9-203ENSMUST00000167755 Cep162Q6ZQ06 1403 aa12.94□□□□□ -0.34
Trim9-203ENSMUST00000167755 Csrnp3P59055 597 aa12.93□□□□□ -0.34
Trim9-203ENSMUST00000167755 Aplp2Q06335 707 aa12.91□□□□□ -0.34
Trim9-203ENSMUST00000167755 1700123L14RikQ3V2K7 440 aa12.9□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 174.9 ms