RNA–Protein interactions for RNA: ENSMUST00000138559.8

Ube4a-204, Transcript of Ubiquitin conjugation factor E4 A, mousemouse

TSL 1 (best) BASIC

Gene Ube4a, Length 3,374 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4a-204ENSMUST00000138559 Myt1lP97500 1187 aa12.02□□□□□ -0.49
Ube4a-204ENSMUST00000138559 Clip1Q922J3 1391 aa12□□□□□ -0.49
Ube4a-204ENSMUST00000138559 Polr1aO35134 1717 aaKnown RBP12□□□□□ -0.49
Ube4a-204ENSMUST00000138559 EprsQ8CGC7 1512 aaKnown RBP11.98□□□□□ -0.49
Ube4a-204ENSMUST00000138559 TchhA0A0B4J1F9 1599 aa11.97□□□□□ -0.49
Ube4a-204ENSMUST00000138559 Adamts12Q811B3 1600 aa11.96□□□□□ -0.49
Ube4a-204ENSMUST00000138559 WizO88286 1684 aaKnown RBP11.95□□□□□ -0.5
Ube4a-204ENSMUST00000138559 Abca16E9PWJ7 1678 aa11.94□□□□□ -0.5
Ube4a-204ENSMUST00000138559 Rpap1Q80TE0 1409 aa11.93□□□□□ -0.5
Ube4a-204ENSMUST00000138559 Shroom2A2ALU4 1481 aa11.92□□□□□ -0.5
Ube4a-204ENSMUST00000138559 Fgd6Q69ZL1 1399 aa11.92□□□□□ -0.5
Ube4a-204ENSMUST00000138559 Cux1P53564 1515 aa11.9□□□□□ -0.5
Ube4a-204ENSMUST00000138559 Fyco1Q8VDC1 1437 aa11.9□□□□□ -0.5
Ube4a-204ENSMUST00000138559 PxdnQ3UQ28 1475 aa11.89□□□□□ -0.51
Ube4a-204ENSMUST00000138559 Gm7298A0A0N4SVU1 1476 aa11.89□□□□□ -0.51
Ube4a-204ENSMUST00000138559 CadpsQ80TJ1 1355 aa11.89□□□□□ -0.51
Ube4a-204ENSMUST00000138559 Ankrd26Q811D2 1581 aa11.88□□□□□ -0.51
Ube4a-204ENSMUST00000138559 Abca5Q8K448 1642 aa11.88□□□□□ -0.51
Ube4a-204ENSMUST00000138559 Abcc2Q8VI47 1543 aa11.87□□□□□ -0.51
Ube4a-204ENSMUST00000138559 Soga1E1U8D0 1418 aa11.86□□□□□ -0.51
Ube4a-204ENSMUST00000138559 Eea1Q8BL66 1411 aa11.86□□□□□ -0.51
Ube4a-204ENSMUST00000138559 Map3k4O08648 1597 aa11.86□□□□□ -0.51
Ube4a-204ENSMUST00000138559 Erich3F6QRE9 1637 aa11.85□□□□□ -0.51
Ube4a-204ENSMUST00000138559 Arhgap27A2AB59 869 aa11.85□□□□□ -0.51
Ube4a-204ENSMUST00000138559 AknaQ80VW7 1404 aa11.85□□□□□ -0.51
Ube4a-204ENSMUST00000138559 Dnmt1P13864 1620 aaKnown RBP11.85□□□□□ -0.51
Ube4a-204ENSMUST00000138559 Pabpn1Q8CCS6 302 aaKnown RBP11.85□□□□□ -0.51
Ube4a-204ENSMUST00000138559 Setd5Q5XJV7 1441 aa11.84□□□□□ -0.51
Ube4a-204ENSMUST00000138559 Pelp1Q9DBD5 1123 aaKnown RBP11.83□□□□□ -0.52
Ube4a-204ENSMUST00000138559 BC005561E9Q5E2 1589 aa11.81□□□□□ -0.52
Ube4a-204ENSMUST00000138559 Neo1P97798 1493 aa11.8□□□□□ -0.52
Ube4a-204ENSMUST00000138559 Abcc1O35379 1528 aa11.79□□□□□ -0.52
Ube4a-204ENSMUST00000138559 Slx4Q6P1D7 1565 aa11.79□□□□□ -0.52
Ube4a-204ENSMUST00000138559 Lmo7E9PYF4 1699 aaKnown RBP11.79□□□□□ -0.52
Ube4a-204ENSMUST00000138559 Pcf11G3X9Z4 1553 aa11.77□□□□□ -0.52
Ube4a-204ENSMUST00000138559 Chd1P40201 1711 aa11.77□□□□□ -0.52
Ube4a-204ENSMUST00000138559 WrnO09053 1401 aa11.77□□□□□ -0.53
Ube4a-204ENSMUST00000138559 Arap1Q4LDD4 1452 aa11.76□□□□□ -0.53
Ube4a-204ENSMUST00000138559 Gm14025A2AP89 1413 aa11.75□□□□□ -0.53
Ube4a-204ENSMUST00000138559 BlmO88700 1416 aa11.74□□□□□ -0.53
Ube4a-204ENSMUST00000138559 Aebp1Q640N1 1128 aa11.73□□□□□ -0.53
Ube4a-204ENSMUST00000138559 Ap3b1Q9Z1T1 1105 aa11.73□□□□□ -0.53
Ube4a-204ENSMUST00000138559 Arhgef5E9Q7D5 1581 aa11.73□□□□□ -0.53
Ube4a-204ENSMUST00000138559 Arhgef12Q8R4H2 1543 aaKnown RBP11.72□□□□□ -0.53
Ube4a-204ENSMUST00000138559 Rrbp1Q99PL5 1605 aaKnown RBP11.72□□□□□ -0.53
Ube4a-204ENSMUST00000138559 Gapvd1Q6PAR5 1458 aa11.72□□□□□ -0.53
Ube4a-204ENSMUST00000138559 Jph4Q80WT0 628 aa11.7□□□□□ -0.54
Ube4a-204ENSMUST00000138559 Kif27Q7M6Z4 1394 aa11.7□□□□□ -0.54
Ube4a-204ENSMUST00000138559 CntlnA2AM05 1397 aa11.7□□□□□ -0.54
Ube4a-204ENSMUST00000138559 Zcchc11B2RX14 1644 aaKnown RBP11.7□□□□□ -0.54
Ube4a-204ENSMUST00000138559 Cep170Q6A065 1588 aa11.69□□□□□ -0.54
Ube4a-204ENSMUST00000138559 Rapgef6Q5NCJ1 1609 aa11.68□□□□□ -0.54
Ube4a-204ENSMUST00000138559 Peg3Q3URU2 1571 aa11.68□□□□□ -0.54
Ube4a-204ENSMUST00000138559 Ythdc2B2RR83 1445 aaKnown RBP11.67□□□□□ -0.54
Ube4a-204ENSMUST00000138559 Ccdc141E9Q8Q6 1531 aa11.67□□□□□ -0.54
Ube4a-204ENSMUST00000138559 Tiam1Q60610 1591 aa11.67□□□□□ -0.54
Ube4a-204ENSMUST00000138559 Col17a1Q07563 1470 aa11.67□□□□□ -0.54
Ube4a-204ENSMUST00000138559 Arhgap31A6X8Z5 1425 aa11.66□□□□□ -0.54
Ube4a-204ENSMUST00000138559 Ncoa2Q61026 1462 aa11.65□□□□□ -0.54
Ube4a-204ENSMUST00000138559 Naip1Q9QWK5 1403 aa11.64□□□□□ -0.55
Ube4a-204ENSMUST00000138559 PtprtQ99M80 1454 aa11.63□□□□□ -0.55
Ube4a-204ENSMUST00000138559 Adgrl3Q80TS3 1537 aa11.62□□□□□ -0.55
Ube4a-204ENSMUST00000138559 Kdm5bQ80Y84 1544 aa11.61□□□□□ -0.55
Ube4a-204ENSMUST00000138559 Fkbp15Q6P9Q6 1216 aaKnown RBP11.61□□□□□ -0.55
Ube4a-204ENSMUST00000138559 Plekhg3Q4VAC9 1341 aa11.61□□□□□ -0.55
Ube4a-204ENSMUST00000138559 Arhgef11Q68FM7 1552 aa11.6□□□□□ -0.55
Ube4a-204ENSMUST00000138559 Mroh2aD3Z750 1679 aa11.59□□□□□ -0.55
Ube4a-204ENSMUST00000138559 AI481877A2ALV5 1481 aa11.59□□□□□ -0.55
Ube4a-204ENSMUST00000138559 Gm1043A0A140LJC2 1431 aa11.59□□□□□ -0.55
Ube4a-204ENSMUST00000138559 Gm156Q58A37 223 aa11.58□□□□□ -0.56
Ube4a-204ENSMUST00000138559 Lmod2Q3UHZ5 550 aa11.58□□□□□ -0.56
Ube4a-204ENSMUST00000138559 Gcc2Q8CHG3 1679 aa11.58□□□□□ -0.56
Ube4a-204ENSMUST00000138559 Magi1Q6RHR9 1471 aa11.57□□□□□ -0.56
Ube4a-204ENSMUST00000138559 Cul7Q8VE73 1689 aa11.57□□□□□ -0.56
Ube4a-204ENSMUST00000138559 Dhx57Q6P5D3 1388 aaKnown RBP11.57□□□□□ -0.56
Ube4a-204ENSMUST00000138559 NhsB1AV60 1647 aa11.56□□□□□ -0.56
Ube4a-204ENSMUST00000138559 Mug1P28665 1476 aa11.56□□□□□ -0.56
Ube4a-204ENSMUST00000138559 Dnajc5P60904 198 aa11.56□□□□□ -0.56
Ube4a-204ENSMUST00000138559 Igf1rQ60751 1373 aa11.56□□□□□ -0.56
Ube4a-204ENSMUST00000138559 Fancd2Q80V62 1450 aa11.55□□□□□ -0.56
Ube4a-204ENSMUST00000138559 Kiaa1210E9Q0C6 1637 aa11.54□□□□□ -0.56
Ube4a-204ENSMUST00000138559 Ncoa3O09000 1398 aa11.54□□□□□ -0.56
Ube4a-204ENSMUST00000138559 Cdc42bpaQ3UU96 1719 aa11.53□□□□□ -0.56
Ube4a-204ENSMUST00000138559 Ehmt2Q9Z148 1263 aaKnown RBP11.53□□□□□ -0.56
Ube4a-204ENSMUST00000138559 NexmifQ5DTT1 1515 aa11.53□□□□□ -0.56
Ube4a-204ENSMUST00000138559 Prex2Q3LAC4 1598 aa11.52□□□□□ -0.56
Ube4a-204ENSMUST00000138559 Ak9G3UYQ4 1894 aa11.52□□□□□ -0.57
Ube4a-204ENSMUST00000138559 Fam163aQ8CAA5 168 aa11.52□□□□□ -0.57
Ube4a-204ENSMUST00000138559 Kiaa1551Q5DTW7 1521 aa11.52□□□□□ -0.57
Ube4a-204ENSMUST00000138559 Wdr7Q920I9 1489 aa11.51□□□□□ -0.57
Ube4a-204ENSMUST00000138559 Setbp1Q9Z180 1582 aa11.51□□□□□ -0.57
Ube4a-204ENSMUST00000138559 Ifnlr1Q8CGK5 535 aa11.51□□□□□ -0.57
Ube4a-204ENSMUST00000138559 Lrrc9Q8CDN9 1456 aa11.5□□□□□ -0.57
Ube4a-204ENSMUST00000138559 Mapkbp1Q6NS57 1503 aa11.49□□□□□ -0.57
Ube4a-204ENSMUST00000138559 Atp10dQ8K2X1 1416 aa11.49□□□□□ -0.57
Ube4a-204ENSMUST00000138559 Lmtk2Q3TYD6 1471 aa11.49□□□□□ -0.57
Ube4a-204ENSMUST00000138559 Ttbk1Q6PCN3 1308 aa11.48□□□□□ -0.57
Ube4a-204ENSMUST00000138559 Pprc1Q6NZN1 1644 aa11.48□□□□□ -0.57
Ube4a-204ENSMUST00000138559 Abca8bQ8K440 1620 aa11.47□□□□□ -0.57
Ube4a-204ENSMUST00000138559 Znf608Q56A10 1511 aa11.46□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 115.6 ms