RNA–Protein interactions for RNA: ENSMUST00000135636.5

Sort1-203, Transcript of Sortilin, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Sort1, Length 6,836 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sort1-203ENSMUST00000135636 Aplp2Q06335 707 aa24.9■■□□□ 1.58
Sort1-203ENSMUST00000135636 Hsp90aa1P07901 733 aaKnown RBP24.88■■□□□ 1.57
Sort1-203ENSMUST00000135636 Stk24Q99KH8 431 aa24.88■■□□□ 1.57
Sort1-203ENSMUST00000135636 Rgl3Q3UYI5 709 aa24.87■■□□□ 1.57
Sort1-203ENSMUST00000135636 Brd4Q9ESU6 1400 aaKnown RBP24.86■■□□□ 1.57
Sort1-203ENSMUST00000135636 BlmO88700 1416 aa24.85■■□□□ 1.57
Sort1-203ENSMUST00000135636 IqubQ8CDK3 788 aa24.78■■□□□ 1.56
Sort1-203ENSMUST00000135636 Grwd1Q810D6 446 aaKnown RBP24.75■■□□□ 1.55
Sort1-203ENSMUST00000135636 Exosc9Q9JHI7 438 aaKnown RBP24.75■■□□□ 1.55
Sort1-203ENSMUST00000135636 Arid4bA2CG63 1314 aaKnown RBP24.7■■□□□ 1.54
Sort1-203ENSMUST00000135636 Kif15Q6P9L6 1387 aa24.7■■□□□ 1.54
Sort1-203ENSMUST00000135636 Srpk2O54781 681 aaKnown RBP24.7■■□□□ 1.54
Sort1-203ENSMUST00000135636 Rrp7aQ9D1C9 280 aaKnown RBP24.7■■□□□ 1.54
Sort1-203ENSMUST00000135636 ClspnQ80YR7 1315 aa24.7■■□□□ 1.54
Sort1-203ENSMUST00000135636 Rb1cc1Q9ESK9 1588 aa24.69■■□□□ 1.54
Sort1-203ENSMUST00000135636 Clstn2Q9ER65 966 aa24.69■■□□□ 1.54
Sort1-203ENSMUST00000135636 Ercc6F8VPZ5 1481 aa24.68■■□□□ 1.54
Sort1-203ENSMUST00000135636 CatipB9EKE5 520 aa24.67■■□□□ 1.54
Sort1-203ENSMUST00000135636 Cnga1P29974 684 aa24.67■■□□□ 1.54
Sort1-203ENSMUST00000135636 1700019A02RikA0A087WPV9 146 aa24.65■■□□□ 1.54
Sort1-203ENSMUST00000135636 Abcc8B2RUS7 1588 aa24.65■■□□□ 1.54
Sort1-203ENSMUST00000135636 Arid3cA6PWV5 409 aa24.64■■□□□ 1.54
Sort1-203ENSMUST00000135636 Gm20521D3Z5F7 333 aa24.64■■□□□ 1.53
Sort1-203ENSMUST00000135636 DekQ7TNV0 380 aaKnown RBP24.63■■□□□ 1.53
Sort1-203ENSMUST00000135636 Stag3O70576 1240 aa24.62■■□□□ 1.53
Sort1-203ENSMUST00000135636 Ppm1fQ8CGA0 452 aa24.59■■□□□ 1.53
Sort1-203ENSMUST00000135636 Apbb1Q9QXJ1 710 aa24.57■■□□□ 1.52
Sort1-203ENSMUST00000135636 Plin1Q8CGN5 517 aa24.57■■□□□ 1.52
Sort1-203ENSMUST00000135636 Mroh3A0A1D5RM54 893 aa24.56■■□□□ 1.52
Sort1-203ENSMUST00000135636 Myt1Q8CFC2 1127 aa24.54■■□□□ 1.52
Sort1-203ENSMUST00000135636 Sox12Q04890 314 aa24.53■■□□□ 1.52
Sort1-203ENSMUST00000135636 Neurod2Q62414 383 aa24.5■■□□□ 1.51
Sort1-203ENSMUST00000135636 Upf2A2AT37 1269 aaKnown RBP24.48■■□□□ 1.51
Sort1-203ENSMUST00000135636 Gm6268A2A3U9 297 aa24.45■■□□□ 1.51
Sort1-203ENSMUST00000135636 Stk26Q99JT2 416 aa24.45■■□□□ 1.5
Sort1-203ENSMUST00000135636 Lmod3E9QA62 571 aa24.45■■□□□ 1.5
Sort1-203ENSMUST00000135636 Anp32aO35381 247 aa24.44■■□□□ 1.5
Sort1-203ENSMUST00000135636 Ppp4r2Q0VGB7 417 aa24.44■■□□□ 1.5
Sort1-203ENSMUST00000135636 Mrs2Q5NCE8 434 aa24.43■■□□□ 1.5
Sort1-203ENSMUST00000135636 Setd5Q5XJV7 1441 aa24.43■■□□□ 1.5
Sort1-203ENSMUST00000135636 AknaQ80VW7 1404 aa24.42■■□□□ 1.5
Sort1-203ENSMUST00000135636 Armcx1Q9CX83 456 aa24.37■■□□□ 1.49
Sort1-203ENSMUST00000135636 Senp3Q9EP97 568 aaKnown RBP24.35■■□□□ 1.49
Sort1-203ENSMUST00000135636 Rsf1E9PWW9 1441 aaKnown RBP24.33■■□□□ 1.49
Sort1-203ENSMUST00000135636 Psme1P97371 249 aa24.32■■□□□ 1.48
Sort1-203ENSMUST00000135636 Ccdc18Q640L5 1455 aa24.3■■□□□ 1.48
Sort1-203ENSMUST00000135636 Znf316Q6PGE4 1016 aa24.3■■□□□ 1.48
Sort1-203ENSMUST00000135636 Ccer2J3QPU5 274 aa24.3■■□□□ 1.48
Sort1-203ENSMUST00000135636 Chrna2Q91X60 512 aa24.3■■□□□ 1.48
Sort1-203ENSMUST00000135636 Tnnt1O88346 262 aa24.28■■□□□ 1.48
Sort1-203ENSMUST00000135636 Mapk8ip3Q9ESN9 1337 aa24.28■■□□□ 1.48
Sort1-203ENSMUST00000135636 Cep164Q5DU05 1446 aa24.25■■□□□ 1.47
Sort1-203ENSMUST00000135636 Bcl11bQ99PV8 884 aa24.23■■□□□ 1.47
Sort1-203ENSMUST00000135636 Card11Q8CIS0 1159 aa24.23■■□□□ 1.47
Sort1-203ENSMUST00000135636 Txndc2Q6P902 515 aa24.21■■□□□ 1.47
Sort1-203ENSMUST00000135636 Calr4Q3TQS0 420 aa24.18■■□□□ 1.46
Sort1-203ENSMUST00000135636 Sall2Q9QX96 1004 aa24.17■■□□□ 1.46
Sort1-203ENSMUST00000135636 Rtl5Q5DTT4 599 aa24.16■■□□□ 1.46
Sort1-203ENSMUST00000135636 Ciz1Q8VEH2 845 aa24.16■■□□□ 1.46
Sort1-203ENSMUST00000135636 Pes1Q9EQ61 584 aaKnown RBP24.15■■□□□ 1.46
Sort1-203ENSMUST00000135636 U2surpQ6NV83 1029 aaKnown RBP24.13■■□□□ 1.45
Sort1-203ENSMUST00000135636 Mtus2Q3UHD3 1353 aa24.13■■□□□ 1.45
Sort1-203ENSMUST00000135636 Trim30dE9PWL0 497 aa24.13■■□□□ 1.45
Sort1-203ENSMUST00000135636 Sh3bp5Q9Z131 463 aa24.12■■□□□ 1.45
Sort1-203ENSMUST00000135636 Hsp90ab1P11499 724 aaKnown RBP24.11■■□□□ 1.45
Sort1-203ENSMUST00000135636 Pip4k2bQ80XI4 416 aa24.1■■□□□ 1.45
Sort1-203ENSMUST00000135636 Dcaf1Q80TR8 1506 aa24.09■■□□□ 1.45
Sort1-203ENSMUST00000135636 Dbr1Q923B1 550 aa24.06■■□□□ 1.44
Sort1-203ENSMUST00000135636 Iqcf3Q9D498 203 aa24.02■■□□□ 1.44
Sort1-203ENSMUST00000135636 NacadQ5SWP3 1504 aa24.02■■□□□ 1.44
Sort1-203ENSMUST00000135636 Birc3O08863 600 aa24.02■■□□□ 1.44
Sort1-203ENSMUST00000135636 PnnO35691 725 aaKnown RBP24■■□□□ 1.43
Sort1-203ENSMUST00000135636 Pak3Q61036 559 aa24■■□□□ 1.43
Sort1-203ENSMUST00000135636 Rtf1A2AQ19 715 aaKnown RBP23.99■■□□□ 1.43
Sort1-203ENSMUST00000135636 Rpap1Q80TE0 1409 aa23.96■■□□□ 1.43
Sort1-203ENSMUST00000135636 Ofd1Q80Z25 1017 aa23.95■■□□□ 1.42
Sort1-203ENSMUST00000135636 Rassf8Q8CJ96 419 aa23.94■■□□□ 1.42
Sort1-203ENSMUST00000135636 PtmaP26350 111 aa23.94■■□□□ 1.42
Sort1-203ENSMUST00000135636 Hsp90b1P08113 802 aaKnown RBP23.94■■□□□ 1.42
Sort1-203ENSMUST00000135636 Ifit1bl1D3Z6F0 470 aa23.88■■□□□ 1.41
Sort1-203ENSMUST00000135636 Nol10Q5RJG1 687 aaKnown RBP23.88■■□□□ 1.41
Sort1-203ENSMUST00000135636 Pibf1E9Q6K3 756 aa23.87■■□□□ 1.41
Sort1-203ENSMUST00000135636 Eif4g2Q62448 906 aaKnown RBP23.87■■□□□ 1.41
Sort1-203ENSMUST00000135636 Isy1Q69ZQ2 285 aaKnown RBP23.84■■□□□ 1.41
Sort1-203ENSMUST00000135636 Lemd3Q9WU40 921 aa23.83■■□□□ 1.41
Sort1-203ENSMUST00000135636 Anapc15P60007 132 aa23.82■■□□□ 1.4
Sort1-203ENSMUST00000135636 Plcb2A3KGF7 1181 aa23.82■■□□□ 1.4
Sort1-203ENSMUST00000135636 Wdr43Q6ZQL4 677 aaKnown RBP23.81■■□□□ 1.4
Sort1-203ENSMUST00000135636 Map4P27546 1125 aaKnown RBP23.79■■□□□ 1.4
Sort1-203ENSMUST00000135636 CanxP35564 591 aaKnown RBP23.79■■□□□ 1.4
Sort1-203ENSMUST00000135636 HdgfP51859 237 aaKnown RBP23.77■■□□□ 1.4
Sort1-203ENSMUST00000135636 Q3TQI7 289 aaKnown RBP23.77■■□□□ 1.4
Sort1-203ENSMUST00000135636 Eea1Q8BL66 1411 aa23.77■■□□□ 1.39
Sort1-203ENSMUST00000135636 Chmp3Q9CQ10 224 aa23.76■■□□□ 1.39
Sort1-203ENSMUST00000135636 B4galnt3Q6L8S8 986 aa23.76■■□□□ 1.39
Sort1-203ENSMUST00000135636 Znf330Q922H9 316 aa23.75■■□□□ 1.39
Sort1-203ENSMUST00000135636 Kif3bQ61771 747 aa23.74■■□□□ 1.39
Sort1-203ENSMUST00000135636 Kif27Q7M6Z4 1394 aa23.73■■□□□ 1.39
Sort1-203ENSMUST00000135636 Tomm22Q9CPQ3 142 aa23.72■■□□□ 1.39
Sort1-203ENSMUST00000135636 Spryd3E9Q9B3 442 aa23.71■■□□□ 1.39
Retrieved 100 of 22,080 RNA–protein pairs in 53 ms