RNA–Protein interactions for RNA: ENSMUST00000116280.8

Knop1-205, Transcript of Lysine-rich nucleolar protein 1, mousemouse

APPRIS P3 TSL 5 BASIC

Gene Knop1, Length 5,382 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Knop1-205ENSMUST00000116280 Rrp7aQ9D1C9 280 aaKnown RBP20.68■□□□□ 0.9
Knop1-205ENSMUST00000116280 Smarca2Q6DIC0 1577 aa20.67■□□□□ 0.9
Knop1-205ENSMUST00000116280 Ccdc88bQ4QRL3 1481 aa20.65■□□□□ 0.9
Knop1-205ENSMUST00000116280 Pcgf6Q99NA9 353 aa20.64■□□□□ 0.89
Knop1-205ENSMUST00000116280 Tnnt3Q9QZ47 272 aa20.64■□□□□ 0.89
Knop1-205ENSMUST00000116280 Kif27Q7M6Z4 1394 aa20.63■□□□□ 0.89
Knop1-205ENSMUST00000116280 Synj1Q8CHC4 1574 aa20.62■□□□□ 0.89
Knop1-205ENSMUST00000116280 Rpap1Q80TE0 1409 aa20.61■□□□□ 0.89
Knop1-205ENSMUST00000116280 Mtus2Q3UHD3 1353 aa20.61■□□□□ 0.89
Knop1-205ENSMUST00000116280 Mapk8ip2Q9ERE9 830 aa20.6■□□□□ 0.89
Knop1-205ENSMUST00000116280 CenpbP27790 599 aa20.59■□□□□ 0.89
Knop1-205ENSMUST00000116280 ClspnQ80YR7 1315 aa20.59■□□□□ 0.89
Knop1-205ENSMUST00000116280 Baz1bQ9Z277 1479 aa20.58■□□□□ 0.88
Knop1-205ENSMUST00000116280 Supt5hO55201 1082 aaKnown RBP20.58■□□□□ 0.88
Knop1-205ENSMUST00000116280 Iqgap2Q3UQ44 1575 aa20.56■□□□□ 0.88
Knop1-205ENSMUST00000116280 LrpprcQ6PB66 1392 aaKnown RBP20.55■□□□□ 0.88
Knop1-205ENSMUST00000116280 Rgl3Q3UYI5 709 aa20.55■□□□□ 0.88
Knop1-205ENSMUST00000116280 Aebp1Q640N1 1128 aa20.54■□□□□ 0.88
Knop1-205ENSMUST00000116280 Pabpn1Q8CCS6 302 aaKnown RBP20.51■□□□□ 0.87
Knop1-205ENSMUST00000116280 Dhx29Q6PGC1 1365 aaKnown RBP20.51■□□□□ 0.87
Knop1-205ENSMUST00000116280 Cep162Q6ZQ06 1403 aa20.5■□□□□ 0.87
Knop1-205ENSMUST00000116280 Mroh3A0A1D5RM54 893 aa20.47■□□□□ 0.87
Knop1-205ENSMUST00000116280 Cttnbp2B9EJA2 1648 aa20.47■□□□□ 0.87
Knop1-205ENSMUST00000116280 Kdm2aP59997 1161 aa20.46■□□□□ 0.87
Knop1-205ENSMUST00000116280 IqubQ8CDK3 788 aa20.45■□□□□ 0.86
Knop1-205ENSMUST00000116280 Lemd3Q9WU40 921 aa20.44■□□□□ 0.86
Knop1-205ENSMUST00000116280 Srpk2O54781 681 aaKnown RBP20.43■□□□□ 0.86
Knop1-205ENSMUST00000116280 Polr3glQ8R0C0 218 aa20.43■□□□□ 0.86
Knop1-205ENSMUST00000116280 Stk24Q99KH8 431 aa20.42■□□□□ 0.86
Knop1-205ENSMUST00000116280 Carmil1Q6EDY6 1374 aa20.38■□□□□ 0.85
Knop1-205ENSMUST00000116280 Grwd1Q810D6 446 aaKnown RBP20.36■□□□□ 0.85
Knop1-205ENSMUST00000116280 Gm20521D3Z5F7 333 aa20.36■□□□□ 0.85
Knop1-205ENSMUST00000116280 DiexfQ8BTT6 772 aaKnown RBP20.35■□□□□ 0.85
Knop1-205ENSMUST00000116280 MlecQ6ZQI3 291 aaKnown RBP20.35■□□□□ 0.85
Knop1-205ENSMUST00000116280 Mia2Q91ZV0 1396 aa20.31■□□□□ 0.84
Knop1-205ENSMUST00000116280 Dhx57Q6P5D3 1388 aaKnown RBP20.3■□□□□ 0.84
Knop1-205ENSMUST00000116280 Map4P27546 1125 aaKnown RBP20.27■□□□□ 0.84
Knop1-205ENSMUST00000116280 CntlnA2AM05 1397 aa20.27■□□□□ 0.84
Knop1-205ENSMUST00000116280 Exosc9Q9JHI7 438 aaKnown RBP20.25■□□□□ 0.83
Knop1-205ENSMUST00000116280 Fyco1Q8VDC1 1437 aa20.21■□□□□ 0.83
Knop1-205ENSMUST00000116280 Soga1E1U8D0 1418 aa20.21■□□□□ 0.83
Knop1-205ENSMUST00000116280 Stag3O70576 1240 aa20.2■□□□□ 0.82
Knop1-205ENSMUST00000116280 NgefQ8CHT1 710 aa20.2■□□□□ 0.82
Knop1-205ENSMUST00000116280 Card11Q8CIS0 1159 aa20.2■□□□□ 0.82
Knop1-205ENSMUST00000116280 Cabp1Q9JLK7 227 aa20.17■□□□□ 0.82
Knop1-205ENSMUST00000116280 Rapgef2Q8CHG7 1496 aa20.17■□□□□ 0.82
Knop1-205ENSMUST00000116280 Urb2E9Q7L1 1524 aaKnown RBP20.16■□□□□ 0.82
Knop1-205ENSMUST00000116280 Arid4bA2CG63 1314 aaKnown RBP20.15■□□□□ 0.82
Knop1-205ENSMUST00000116280 Mrc2Q64449 1479 aa20.15■□□□□ 0.82
Knop1-205ENSMUST00000116280 Rangap1P46061 589 aaKnown RBP20.15■□□□□ 0.82
Knop1-205ENSMUST00000116280 Jph4Q80WT0 628 aa20.14■□□□□ 0.81
Knop1-205ENSMUST00000116280 WrnO09053 1401 aa20.14■□□□□ 0.81
Knop1-205ENSMUST00000116280 Kif3bQ61771 747 aa20.13■□□□□ 0.81
Knop1-205ENSMUST00000116280 Rad21Q61550 635 aaKnown RBP20.12■□□□□ 0.81
Knop1-205ENSMUST00000116280 Rsph4aQ8BYM7 716 aa20.12■□□□□ 0.81
Knop1-205ENSMUST00000116280 Mrs2Q5NCE8 434 aa20.11■□□□□ 0.81
Knop1-205ENSMUST00000116280 Sall2Q9QX96 1004 aa20.1■□□□□ 0.81
Knop1-205ENSMUST00000116280 Sart1Q9Z315 806 aaKnown RBP20.1■□□□□ 0.81
Knop1-205ENSMUST00000116280 Efcab5A0JP43 1406 aa20.08■□□□□ 0.81
Knop1-205ENSMUST00000116280 Cwc22Q8C5N3 908 aaKnown RBP20.07■□□□□ 0.8
Knop1-205ENSMUST00000116280 Frmpd1A2AKB4 1549 aa20.06■□□□□ 0.8
Knop1-205ENSMUST00000116280 Pkd2O35245 966 aa20.06■□□□□ 0.8
Knop1-205ENSMUST00000116280 Trak1Q6PD31 939 aa20.06■□□□□ 0.8
Knop1-205ENSMUST00000116280 Psme1P97371 249 aa20.05■□□□□ 0.8
Knop1-205ENSMUST00000116280 Txndc2Q6P902 515 aa20.05■□□□□ 0.8
Knop1-205ENSMUST00000116280 Arhgap35Q91YM2 1499 aa20■□□□□ 0.79
Knop1-205ENSMUST00000116280 BicraF8VPZ9 1578 aa19.99■□□□□ 0.79
Knop1-205ENSMUST00000116280 Stk26Q99JT2 416 aa19.98■□□□□ 0.79
Knop1-205ENSMUST00000116280 Plekhh2Q8C115 1491 aa19.98■□□□□ 0.79
Knop1-205ENSMUST00000116280 Rad54l2Q99NG0 1466 aa19.98■□□□□ 0.79
Knop1-205ENSMUST00000116280 Ccnb3Q810T2 1396 aa19.98■□□□□ 0.79
Knop1-205ENSMUST00000116280 Hspa5P20029 655 aaKnown RBP19.97■□□□□ 0.79
Knop1-205ENSMUST00000116280 Duox2A2AQ99 1517 aa19.96■□□□□ 0.79
Knop1-205ENSMUST00000116280 Nup155Q99P88 1391 aaKnown RBP19.96■□□□□ 0.79
Knop1-205ENSMUST00000116280 Irx6Q9ER75 438 aa19.96■□□□□ 0.79
Knop1-205ENSMUST00000116280 Upf2A2AT37 1269 aaKnown RBP19.96■□□□□ 0.79
Knop1-205ENSMUST00000116280 Ifit1bl1D3Z6F0 470 aa19.95■□□□□ 0.78
Knop1-205ENSMUST00000116280 Cnga1P29974 684 aa19.94■□□□□ 0.78
Knop1-205ENSMUST00000116280 Mphosph9A6H5Y1 991 aa19.94■□□□□ 0.78
Knop1-205ENSMUST00000116280 Ggt6Q6PDE7 497 aa19.94■□□□□ 0.78
Knop1-205ENSMUST00000116280 Ncoa2Q61026 1462 aa19.94■□□□□ 0.78
Knop1-205ENSMUST00000116280 Shroom4Q1W617 1475 aa19.92■□□□□ 0.78
Knop1-205ENSMUST00000116280 Fgd6Q69ZL1 1399 aa19.91■□□□□ 0.78
Knop1-205ENSMUST00000116280 Gtf2e1Q9D0D5 440 aa19.89■□□□□ 0.78
Knop1-205ENSMUST00000116280 Trim26Q99PN3 545 aa19.89■□□□□ 0.77
Knop1-205ENSMUST00000116280 Zfp777B9EKF4 885 aa19.89■□□□□ 0.77
Knop1-205ENSMUST00000116280 Dnajc5bQ9CQ94 199 aa19.89■□□□□ 0.77
Knop1-205ENSMUST00000116280 PogzQ8BZH4 1409 aaKnown RBP19.87■□□□□ 0.77
Knop1-205ENSMUST00000116280 Fgd1P52734 960 aa19.87■□□□□ 0.77
Knop1-205ENSMUST00000116280 Csrnp3P59055 597 aa19.87■□□□□ 0.77
Knop1-205ENSMUST00000116280 Cc2d2bA0A286YDU8 1405 aa19.86■□□□□ 0.77
Knop1-205ENSMUST00000116280 Cc2d2aQ8CFW7 1633 aa19.85■□□□□ 0.77
Knop1-205ENSMUST00000116280 Mapk8ip3Q9ESN9 1337 aa19.84■□□□□ 0.77
Knop1-205ENSMUST00000116280 Rundc1Q0VDN7 615 aa19.84■□□□□ 0.77
Knop1-205ENSMUST00000116280 Wdr62Q3U3T8 1523 aa19.83■□□□□ 0.77
Knop1-205ENSMUST00000116280 Aplp2Q06335 707 aa19.83■□□□□ 0.76
Knop1-205ENSMUST00000116280 Tdrd9Q14BI7 1383 aa19.81■□□□□ 0.76
Knop1-205ENSMUST00000116280 Iqcf3Q9D498 203 aa19.81■□□□□ 0.76
Knop1-205ENSMUST00000116280 Spag9Q58A65 1321 aaKnown RBP19.81■□□□□ 0.76
Knop1-205ENSMUST00000116280 Amer1Q7TS75 1132 aa19.8■□□□□ 0.76
Retrieved 100 of 22,080 RNA–protein pairs in 28.6 ms