RNA–Protein interactions for RNA: ENSMUST00000113705.7

Tpm1-215, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,759 nt, Biotype protein coding, Subcellular localisation Axon .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-215ENSMUST00000113705 AknaQ80VW7 1404 aa26.73■■□□□ 1.87
Tpm1-215ENSMUST00000113705 Rapgef2Q8CHG7 1496 aa26.71■■□□□ 1.87
Tpm1-215ENSMUST00000113705 Zcchc11B2RX14 1644 aaKnown RBP26.68■■□□□ 1.86
Tpm1-215ENSMUST00000113705 Abca16E9PWJ7 1678 aa26.67■■□□□ 1.86
Tpm1-215ENSMUST00000113705 WizO88286 1684 aaKnown RBP26.67■■□□□ 1.86
Tpm1-215ENSMUST00000113705 TchhA0A0B4J1F9 1599 aa26.65■■□□□ 1.86
Tpm1-215ENSMUST00000113705 EprsQ8CGC7 1512 aaKnown RBP26.64■■□□□ 1.86
Tpm1-215ENSMUST00000113705 PxdnQ3UQ28 1475 aa26.63■■□□□ 1.85
Tpm1-215ENSMUST00000113705 Arhgap35Q91YM2 1499 aa26.61■■□□□ 1.85
Tpm1-215ENSMUST00000113705 Abcc1O35379 1528 aa26.6■■□□□ 1.85
Tpm1-215ENSMUST00000113705 Gapvd1Q6PAR5 1458 aa26.6■■□□□ 1.85
Tpm1-215ENSMUST00000113705 Abcc2Q8VI47 1543 aa26.6■■□□□ 1.85
Tpm1-215ENSMUST00000113705 Adamts12Q811B3 1600 aa26.6■■□□□ 1.85
Tpm1-215ENSMUST00000113705 Arhgap27A2AB59 869 aa26.59■■□□□ 1.85
Tpm1-215ENSMUST00000113705 Cep170Q6A065 1588 aa26.59■■□□□ 1.85
Tpm1-215ENSMUST00000113705 Dnmt1P13864 1620 aaKnown RBP26.58■■□□□ 1.85
Tpm1-215ENSMUST00000113705 Carmil1Q6EDY6 1374 aa26.56■■□□□ 1.84
Tpm1-215ENSMUST00000113705 BC005561E9Q5E2 1589 aa26.53■■□□□ 1.84
Tpm1-215ENSMUST00000113705 Adgrl3Q80TS3 1537 aa26.53■■□□□ 1.84
Tpm1-215ENSMUST00000113705 Neo1P97798 1493 aa26.53■■□□□ 1.84
Tpm1-215ENSMUST00000113705 Map3k1P53349 1493 aa26.52■■□□□ 1.84
Tpm1-215ENSMUST00000113705 Map3k4O08648 1597 aa26.51■■□□□ 1.83
Tpm1-215ENSMUST00000113705 Chd1P40201 1711 aa26.51■■□□□ 1.83
Tpm1-215ENSMUST00000113705 CadpsQ80TJ1 1355 aa26.5■■□□□ 1.83
Tpm1-215ENSMUST00000113705 Rpap1Q80TE0 1409 aa26.47■■□□□ 1.83
Tpm1-215ENSMUST00000113705 Eif4g1Q6NZJ6 1600 aaKnown RBP26.46■■□□□ 1.83
Tpm1-215ENSMUST00000113705 Soga1E1U8D0 1418 aa26.45■■□□□ 1.83
Tpm1-215ENSMUST00000113705 Cep162Q6ZQ06 1403 aa26.45■■□□□ 1.82
Tpm1-215ENSMUST00000113705 Ythdc2B2RR83 1445 aaKnown RBP26.43■■□□□ 1.82
Tpm1-215ENSMUST00000113705 Gm156Q58A37 223 aa26.43■■□□□ 1.82
Tpm1-215ENSMUST00000113705 Gm7298A0A0N4SVU1 1476 aa26.41■■□□□ 1.82
Tpm1-215ENSMUST00000113705 Myt1lP97500 1187 aa26.41■■□□□ 1.82
Tpm1-215ENSMUST00000113705 PtprtQ99M80 1454 aa26.4■■□□□ 1.82
Tpm1-215ENSMUST00000113705 Gm14025A2AP89 1413 aa26.38■■□□□ 1.81
Tpm1-215ENSMUST00000113705 Polr1aO35134 1717 aaKnown RBP26.37■■□□□ 1.81
Tpm1-215ENSMUST00000113705 Slx4Q6P1D7 1565 aa26.36■■□□□ 1.81
Tpm1-215ENSMUST00000113705 Clip1Q922J3 1391 aa26.36■■□□□ 1.81
Tpm1-215ENSMUST00000113705 Ttbk1Q6PCN3 1308 aa26.36■■□□□ 1.81
Tpm1-215ENSMUST00000113705 Cux1P53564 1515 aa26.34■■□□□ 1.81
Tpm1-215ENSMUST00000113705 Arhgef5E9Q7D5 1581 aa26.32■■□□□ 1.8
Tpm1-215ENSMUST00000113705 Abca5Q8K448 1642 aa26.31■■□□□ 1.8
Tpm1-215ENSMUST00000113705 Arhgef12Q8R4H2 1543 aaKnown RBP26.24■■□□□ 1.79
Tpm1-215ENSMUST00000113705 WrnO09053 1401 aa26.22■■□□□ 1.79
Tpm1-215ENSMUST00000113705 Jph4Q80WT0 628 aa26.2■■□□□ 1.79
Tpm1-215ENSMUST00000113705 Fyco1Q8VDC1 1437 aa26.2■■□□□ 1.78
Tpm1-215ENSMUST00000113705 Pprc1Q6NZN1 1644 aa26.2■■□□□ 1.78
Tpm1-215ENSMUST00000113705 Fkbp15Q6P9Q6 1216 aaKnown RBP26.18■■□□□ 1.78
Tpm1-215ENSMUST00000113705 Ifnlr1Q8CGK5 535 aa26.16■■□□□ 1.78
Tpm1-215ENSMUST00000113705 AI481877A2ALV5 1481 aa26.13■■□□□ 1.77
Tpm1-215ENSMUST00000113705 Ankrd26Q811D2 1581 aa26.11■■□□□ 1.77
Tpm1-215ENSMUST00000113705 Setbp1Q9Z180 1582 aa26.11■■□□□ 1.77
Tpm1-215ENSMUST00000113705 Pcdh10E9PXQ7 1057 aa26.09■■□□□ 1.77
Tpm1-215ENSMUST00000113705 Ak9G3UYQ4 1894 aa26.06■■□□□ 1.76
Tpm1-215ENSMUST00000113705 Rrbp1Q99PL5 1605 aaKnown RBP26.06■■□□□ 1.76
Tpm1-215ENSMUST00000113705 Arhgap31A6X8Z5 1425 aa25.98■■□□□ 1.75
Tpm1-215ENSMUST00000113705 Ppp1r18Q8BQ30 594 aa25.97■■□□□ 1.75
Tpm1-215ENSMUST00000113705 Kdm5bQ80Y84 1544 aa25.95■■□□□ 1.74
Tpm1-215ENSMUST00000113705 Ccdc141E9Q8Q6 1531 aa25.94■■□□□ 1.74
Tpm1-215ENSMUST00000113705 Setd5Q5XJV7 1441 aa25.93■■□□□ 1.74
Tpm1-215ENSMUST00000113705 Ap3b1Q9Z1T1 1105 aa25.92■■□□□ 1.74
Tpm1-215ENSMUST00000113705 Aebp1Q640N1 1128 aa25.91■■□□□ 1.74
Tpm1-215ENSMUST00000113705 Arid3cA6PWV5 409 aa25.9■■□□□ 1.74
Tpm1-215ENSMUST00000113705 Lrrc9Q8CDN9 1456 aa25.89■■□□□ 1.74
Tpm1-215ENSMUST00000113705 Erich3F6QRE9 1637 aa25.89■■□□□ 1.74
Tpm1-215ENSMUST00000113705 Znf608Q56A10 1511 aa25.89■■□□□ 1.74
Tpm1-215ENSMUST00000113705 Cul7Q8VE73 1689 aa25.86■■□□□ 1.73
Tpm1-215ENSMUST00000113705 Igf1rQ60751 1373 aa25.86■■□□□ 1.73
Tpm1-215ENSMUST00000113705 Lmo7E9PYF4 1699 aaKnown RBP25.85■■□□□ 1.73
Tpm1-215ENSMUST00000113705 BlmO88700 1416 aa25.85■■□□□ 1.73
Tpm1-215ENSMUST00000113705 Kif27Q7M6Z4 1394 aa25.84■■□□□ 1.73
Tpm1-215ENSMUST00000113705 Eea1Q8BL66 1411 aa25.84■■□□□ 1.73
Tpm1-215ENSMUST00000113705 Pcf11G3X9Z4 1553 aa25.84■■□□□ 1.73
Tpm1-215ENSMUST00000113705 Rapgef6Q5NCJ1 1609 aa25.84■■□□□ 1.73
Tpm1-215ENSMUST00000113705 Mroh2aD3Z750 1679 aa25.84■■□□□ 1.73
Tpm1-215ENSMUST00000113705 NhsB1AV60 1647 aa25.83■■□□□ 1.73
Tpm1-215ENSMUST00000113705 Wdr7Q920I9 1489 aa25.82■■□□□ 1.72
Tpm1-215ENSMUST00000113705 Clasp1Q80TV8 1535 aaKnown RBP25.79■■□□□ 1.72
Tpm1-215ENSMUST00000113705 Ncoa2Q61026 1462 aa25.77■■□□□ 1.72
Tpm1-215ENSMUST00000113705 Gcc2Q8CHG3 1679 aa25.75■■□□□ 1.71
Tpm1-215ENSMUST00000113705 Atp10dQ8K2X1 1416 aa25.74■■□□□ 1.71
Tpm1-215ENSMUST00000113705 Ttc37F8VPK0 1563 aa25.74■■□□□ 1.71
Tpm1-215ENSMUST00000113705 Depdc5P61460 1591 aa25.73■■□□□ 1.71
Tpm1-215ENSMUST00000113705 Arap1Q4LDD4 1452 aa25.72■■□□□ 1.71
Tpm1-215ENSMUST00000113705 Fancd2Q80V62 1450 aa25.69■■□□□ 1.7
Tpm1-215ENSMUST00000113705 Arhgef11Q68FM7 1552 aa25.68■■□□□ 1.7
Tpm1-215ENSMUST00000113705 Mapkbp1Q6NS57 1503 aa25.67■■□□□ 1.7
Tpm1-215ENSMUST00000113705 Magi1Q6RHR9 1471 aa25.67■■□□□ 1.7
Tpm1-215ENSMUST00000113705 AdgbG3UZ78 1657 aa25.65■■□□□ 1.7
Tpm1-215ENSMUST00000113705 Prex2Q3LAC4 1598 aa25.64■■□□□ 1.69
Tpm1-215ENSMUST00000113705 Kiaa1210E9Q0C6 1637 aa25.61■■□□□ 1.69
Tpm1-215ENSMUST00000113705 Zfyve16Q80U44 1528 aa25.6■■□□□ 1.69
Tpm1-215ENSMUST00000113705 Abca8bQ8K440 1620 aa25.59■■□□□ 1.69
Tpm1-215ENSMUST00000113705 Ncoa3O09000 1398 aa25.59■■□□□ 1.69
Tpm1-215ENSMUST00000113705 Lmod2Q3UHZ5 550 aa25.56■■□□□ 1.68
Tpm1-215ENSMUST00000113705 Mug1P28665 1476 aa25.55■■□□□ 1.68
Tpm1-215ENSMUST00000113705 CntlnA2AM05 1397 aa25.55■■□□□ 1.68
Tpm1-215ENSMUST00000113705 Fndc1E9Q043 1732 aa25.48■■□□□ 1.67
Tpm1-215ENSMUST00000113705 AglF8VPN4 1532 aa25.48■■□□□ 1.67
Tpm1-215ENSMUST00000113705 Cdc42bpaQ3UU96 1719 aa25.47■■□□□ 1.67
Tpm1-215ENSMUST00000113705 Gm1043A0A140LJC2 1431 aa25.47■■□□□ 1.67
Retrieved 100 of 22,080 RNA–protein pairs in 22.7 ms