RNA–Protein interactions for RNA: ENSMUST00000113337.9

Ubr2-202, Transcript of E3 ubiquitin-protein ligase UBR2, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ubr2, Length 7,633 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr2-202ENSMUST00000113337 Calr4Q3TQS0 420 aa20.76■□□□□ 0.91
Ubr2-202ENSMUST00000113337 PnnO35691 725 aaKnown RBP20.75■□□□□ 0.91
Ubr2-202ENSMUST00000113337 Chic2Q9D9G3 165 aa20.75■□□□□ 0.91
Ubr2-202ENSMUST00000113337 MyclP10166 368 aa20.71■□□□□ 0.91
Ubr2-202ENSMUST00000113337 NgefQ8CHT1 710 aa20.71■□□□□ 0.91
Ubr2-202ENSMUST00000113337 Hsp90ab1P11499 724 aaKnown RBP20.71■□□□□ 0.91
Ubr2-202ENSMUST00000113337 Trim30dE9PWL0 497 aa20.65■□□□□ 0.9
Ubr2-202ENSMUST00000113337 Pes1Q9EQ61 584 aaKnown RBP20.59■□□□□ 0.89
Ubr2-202ENSMUST00000113337 Slc4a1apE9PX68 744 aa20.57■□□□□ 0.88
Ubr2-202ENSMUST00000113337 Aplp2Q06335 707 aa20.56■□□□□ 0.88
Ubr2-202ENSMUST00000113337 Plcb2A3KGF7 1181 aa20.56■□□□□ 0.88
Ubr2-202ENSMUST00000113337 Mrs2Q5NCE8 434 aa20.55■□□□□ 0.88
Ubr2-202ENSMUST00000113337 Prm3Q62100 101 aa20.55■□□□□ 0.88
Ubr2-202ENSMUST00000113337 Apbb1Q9QXJ1 710 aa20.53■□□□□ 0.88
Ubr2-202ENSMUST00000113337 CanxP35564 591 aaKnown RBP20.53■□□□□ 0.88
Ubr2-202ENSMUST00000113337 Znf316Q6PGE4 1016 aa20.53■□□□□ 0.88
Ubr2-202ENSMUST00000113337 Clip1Q922J3 1391 aa20.53■□□□□ 0.88
Ubr2-202ENSMUST00000113337 Wdr43Q6ZQL4 677 aaKnown RBP20.52■□□□□ 0.88
Ubr2-202ENSMUST00000113337 Kdm2aP59997 1161 aa20.52■□□□□ 0.87
Ubr2-202ENSMUST00000113337 1700019A02RikA0A087WPV9 146 aa20.5■□□□□ 0.87
Ubr2-202ENSMUST00000113337 IqubQ8CDK3 788 aa20.5■□□□□ 0.87
Ubr2-202ENSMUST00000113337 Exosc9Q9JHI7 438 aaKnown RBP20.49■□□□□ 0.87
Ubr2-202ENSMUST00000113337 Ubl4bQ9CQ84 188 aa20.49■□□□□ 0.87
Ubr2-202ENSMUST00000113337 Q8BT18 775 aa20.47■□□□□ 0.87
Ubr2-202ENSMUST00000113337 Sh3bp5Q9Z131 463 aa20.44■□□□□ 0.86
Ubr2-202ENSMUST00000113337 Ggt6Q6PDE7 497 aa20.44■□□□□ 0.86
Ubr2-202ENSMUST00000113337 Clstn2Q9ER65 966 aa20.43■□□□□ 0.86
Ubr2-202ENSMUST00000113337 Gm6268A2A3U9 297 aa20.43■□□□□ 0.86
Ubr2-202ENSMUST00000113337 Rgl3Q3UYI5 709 aa20.43■□□□□ 0.86
Ubr2-202ENSMUST00000113337 Noc3lQ8VI84 807 aaKnown RBP20.42■□□□□ 0.86
Ubr2-202ENSMUST00000113337 Neurod2Q62414 383 aa20.42■□□□□ 0.86
Ubr2-202ENSMUST00000113337 Armcx1Q9CX83 456 aa20.4■□□□□ 0.86
Ubr2-202ENSMUST00000113337 Spryd3E9Q9B3 442 aa20.36■□□□□ 0.85
Ubr2-202ENSMUST00000113337 Anapc15P60007 132 aa20.35■□□□□ 0.85
Ubr2-202ENSMUST00000113337 Ccer2J3QPU5 274 aa20.35■□□□□ 0.85
Ubr2-202ENSMUST00000113337 Casc1Q6TDU8 730 aa20.34■□□□□ 0.85
Ubr2-202ENSMUST00000113337 Sall2Q9QX96 1004 aa20.34■□□□□ 0.85
Ubr2-202ENSMUST00000113337 Srpk2O54781 681 aaKnown RBP20.32■□□□□ 0.84
Ubr2-202ENSMUST00000113337 Isy1Q69ZQ2 285 aaKnown RBP20.32■□□□□ 0.84
Ubr2-202ENSMUST00000113337 Mapk8ip3Q9ESN9 1337 aa20.32■□□□□ 0.84
Ubr2-202ENSMUST00000113337 Grwd1Q810D6 446 aaKnown RBP20.3■□□□□ 0.84
Ubr2-202ENSMUST00000113337 Hsp90b1P08113 802 aaKnown RBP20.29■□□□□ 0.84
Ubr2-202ENSMUST00000113337 Dbr1Q923B1 550 aa20.28■□□□□ 0.84
Ubr2-202ENSMUST00000113337 Mak16Q8BGS0 296 aaKnown RBP20.28■□□□□ 0.84
Ubr2-202ENSMUST00000113337 Ecm2Q5FW85 670 aa20.27■□□□□ 0.84
Ubr2-202ENSMUST00000113337 Gm20521D3Z5F7 333 aa20.27■□□□□ 0.84
Ubr2-202ENSMUST00000113337 Rassf8Q8CJ96 419 aa20.27■□□□□ 0.83
Ubr2-202ENSMUST00000113337 BlmO88700 1416 aa20.25■□□□□ 0.83
Ubr2-202ENSMUST00000113337 Pcmtd1P59913 357 aa20.24■□□□□ 0.83
Ubr2-202ENSMUST00000113337 Anks4bQ8K3X6 423 aa20.23■□□□□ 0.83
Ubr2-202ENSMUST00000113337 Stag3O70576 1240 aa20.22■□□□□ 0.83
Ubr2-202ENSMUST00000113337 Adam1bQ8R534 806 aa20.22■□□□□ 0.83
Ubr2-202ENSMUST00000113337 Stk24Q99KH8 431 aa20.21■□□□□ 0.83
Ubr2-202ENSMUST00000113337 Ofd1Q80Z25 1017 aa20.21■□□□□ 0.83
Ubr2-202ENSMUST00000113337 Mroh3A0A1D5RM54 893 aa20.2■□□□□ 0.82
Ubr2-202ENSMUST00000113337 Htatsf1Q8BGC0 757 aa20.19■□□□□ 0.82
Ubr2-202ENSMUST00000113337 Ubap1lG3UW59 384 aa20.19■□□□□ 0.82
Ubr2-202ENSMUST00000113337 Plin1Q8CGN5 517 aa20.19■□□□□ 0.82
Ubr2-202ENSMUST00000113337 Iqcf3Q9D498 203 aa20.18■□□□□ 0.82
Ubr2-202ENSMUST00000113337 BccipQ9CWI3 316 aa20.17■□□□□ 0.82
Ubr2-202ENSMUST00000113337 Cnga1P29974 684 aa20.16■□□□□ 0.82
Ubr2-202ENSMUST00000113337 Eif4g2Q62448 906 aaKnown RBP20.16■□□□□ 0.82
Ubr2-202ENSMUST00000113337 Ppm1fQ8CGA0 452 aa20.15■□□□□ 0.82
Ubr2-202ENSMUST00000113337 Wwc2Q6NXJ0 1187 aa20.15■□□□□ 0.82
Ubr2-202ENSMUST00000113337 Map7O88735 730 aa20.12■□□□□ 0.81
Ubr2-202ENSMUST00000113337 Mical1Q8VDP3 1048 aa20.11■□□□□ 0.81
Ubr2-202ENSMUST00000113337 Erich6bQ9D4S6 220 aa20.11■□□□□ 0.81
Ubr2-202ENSMUST00000113337 Vps53Q8CCB4 832 aa20.1■□□□□ 0.81
Ubr2-202ENSMUST00000113337 MccE9PWI3 1003 aa20.09■□□□□ 0.81
Ubr2-202ENSMUST00000113337 Ccdc9Q8VC31 543 aaKnown RBP20.08■□□□□ 0.81
Ubr2-202ENSMUST00000113337 B4galnt3Q6L8S8 986 aa20.07■□□□□ 0.8
Ubr2-202ENSMUST00000113337 Nol10Q5RJG1 687 aaKnown RBP20.06■□□□□ 0.8
Ubr2-202ENSMUST00000113337 U2surpQ6NV83 1029 aaKnown RBP20.06■□□□□ 0.8
Ubr2-202ENSMUST00000113337 Card11Q8CIS0 1159 aa20.04■□□□□ 0.8
Ubr2-202ENSMUST00000113337 Arhgap27A2AB59 869 aa20.03■□□□□ 0.8
Ubr2-202ENSMUST00000113337 Tnnt1O88346 262 aa20.02■□□□□ 0.8
Ubr2-202ENSMUST00000113337 Chmp4bQ9D8B3 224 aaKnown RBP20.02■□□□□ 0.8
Ubr2-202ENSMUST00000113337 Rtf1A2AQ19 715 aaKnown RBP20.01■□□□□ 0.79
Ubr2-202ENSMUST00000113337 Dnai2A2AC93 623 aa20.01■□□□□ 0.79
Ubr2-202ENSMUST00000113337 Rrp7aQ9D1C9 280 aaKnown RBP20■□□□□ 0.79
Ubr2-202ENSMUST00000113337 NudcO35685 332 aaKnown RBP20■□□□□ 0.79
Ubr2-202ENSMUST00000113337 Tnnt2P50752 301 aa20■□□□□ 0.79
Ubr2-202ENSMUST00000113337 CgnP59242 1191 aa19.99■□□□□ 0.79
Ubr2-202ENSMUST00000113337 Gm973E9Q295 1059 aa19.98■□□□□ 0.79
Ubr2-202ENSMUST00000113337 Tpm3-rs7D3Z2H9 248 aa19.97■□□□□ 0.79
Ubr2-202ENSMUST00000113337 Ppp1r18Q8BQ30 594 aa19.97■□□□□ 0.79
Ubr2-202ENSMUST00000113337 Ncbp3Q8BZR9 615 aaKnown RBP19.97■□□□□ 0.79
Ubr2-202ENSMUST00000113337 Iffo2Q8R2V2 512 aa19.97■□□□□ 0.79
Ubr2-202ENSMUST00000113337 Calcoco2A2A6M5 331 aa19.96■□□□□ 0.79
Ubr2-202ENSMUST00000113337 Fam71e1A1L3C1 212 aa19.96■□□□□ 0.79
Ubr2-202ENSMUST00000113337 SetQ9EQU5 289 aaKnown RBP19.94■□□□□ 0.78
Ubr2-202ENSMUST00000113337 Ppm1gQ61074 542 aa19.94■□□□□ 0.78
Ubr2-202ENSMUST00000113337 Senp3Q9EP97 568 aaKnown RBP19.93■□□□□ 0.78
Ubr2-202ENSMUST00000113337 KnstrnQ9D9Z1 312 aaKnown RBP19.92■□□□□ 0.78
Ubr2-202ENSMUST00000113337 Tomm22Q9CPQ3 142 aa19.91■□□□□ 0.78
Ubr2-202ENSMUST00000113337 MecomP14404 1042 aa19.9■□□□□ 0.78
Ubr2-202ENSMUST00000113337 Sox12Q04890 314 aa19.9■□□□□ 0.78
Ubr2-202ENSMUST00000113337 Arid4aF8VPQ2 1261 aaKnown RBP19.9■□□□□ 0.78
Ubr2-202ENSMUST00000113337 MlecQ6ZQI3 291 aaKnown RBP19.89■□□□□ 0.77
Ubr2-202ENSMUST00000113337 CrebrfQ8CDG5 640 aaKnown RBP19.89■□□□□ 0.77
Retrieved 100 of 22,080 RNA–protein pairs in 68.9 ms