RNA–Protein interactions for RNA: ENSMUST00000113251.9

Trem1-202, Transcript of Triggering receptor expressed on myeloid cells 1, mousemouse

TSL 1 (best) BASIC

Gene Trem1, Length 2,077 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1-202ENSMUST00000113251 Polr1aO35134 1717 aaKnown RBP22.6■■□□□ 1.21
Trem1-202ENSMUST00000113251 Carmil1Q6EDY6 1374 aa22.6■■□□□ 1.21
Trem1-202ENSMUST00000113251 Clip1Q922J3 1391 aa22.55■■□□□ 1.2
Trem1-202ENSMUST00000113251 Myt1lP97500 1187 aa22.51■■□□□ 1.19
Trem1-202ENSMUST00000113251 Adamts12Q811B3 1600 aa22.5■■□□□ 1.19
Trem1-202ENSMUST00000113251 EprsQ8CGC7 1512 aaKnown RBP22.47■■□□□ 1.19
Trem1-202ENSMUST00000113251 TchhA0A0B4J1F9 1599 aa22.46■■□□□ 1.19
Trem1-202ENSMUST00000113251 WizO88286 1684 aaKnown RBP22.46■■□□□ 1.19
Trem1-202ENSMUST00000113251 Abca16E9PWJ7 1678 aa22.45■■□□□ 1.18
Trem1-202ENSMUST00000113251 Erich3F6QRE9 1637 aa22.42■■□□□ 1.18
Trem1-202ENSMUST00000113251 Rpap1Q80TE0 1409 aa22.41■■□□□ 1.18
Trem1-202ENSMUST00000113251 Ankrd26Q811D2 1581 aa22.39■■□□□ 1.17
Trem1-202ENSMUST00000113251 Cux1P53564 1515 aa22.38■■□□□ 1.17
Trem1-202ENSMUST00000113251 Abca5Q8K448 1642 aa22.37■■□□□ 1.17
Trem1-202ENSMUST00000113251 Fyco1Q8VDC1 1437 aa22.36■■□□□ 1.17
Trem1-202ENSMUST00000113251 Eea1Q8BL66 1411 aa22.33■■□□□ 1.16
Trem1-202ENSMUST00000113251 Acin1Q9JIX8 1338 aaKnown RBP22.3■■□□□ 1.16
Trem1-202ENSMUST00000113251 Gm7298A0A0N4SVU1 1476 aa22.29■■□□□ 1.16
Trem1-202ENSMUST00000113251 CadpsQ80TJ1 1355 aa22.28■■□□□ 1.16
Trem1-202ENSMUST00000113251 PxdnQ3UQ28 1475 aa22.28■■□□□ 1.16
Trem1-202ENSMUST00000113251 Lmo7E9PYF4 1699 aaKnown RBP22.27■■□□□ 1.16
Trem1-202ENSMUST00000113251 Abcc2Q8VI47 1543 aa22.26■■□□□ 1.15
Trem1-202ENSMUST00000113251 Setd5Q5XJV7 1441 aa22.26■■□□□ 1.15
Trem1-202ENSMUST00000113251 Soga1E1U8D0 1418 aa22.25■■□□□ 1.15
Trem1-202ENSMUST00000113251 Dnmt1P13864 1620 aaKnown RBP22.25■■□□□ 1.15
Trem1-202ENSMUST00000113251 Map3k4O08648 1597 aa22.23■■□□□ 1.15
Trem1-202ENSMUST00000113251 Fgd6Q69ZL1 1399 aa22.23■■□□□ 1.15
Trem1-202ENSMUST00000113251 Shroom2A2ALU4 1481 aa22.2■■□□□ 1.14
Trem1-202ENSMUST00000113251 Pcf11G3X9Z4 1553 aa22.19■■□□□ 1.14
Trem1-202ENSMUST00000113251 Arap1Q4LDD4 1452 aa22.16■■□□□ 1.14
Trem1-202ENSMUST00000113251 BC005561E9Q5E2 1589 aa22.16■■□□□ 1.14
Trem1-202ENSMUST00000113251 Arhgef5E9Q7D5 1581 aa22.15■■□□□ 1.14
Trem1-202ENSMUST00000113251 Arhgap27A2AB59 869 aa22.13■■□□□ 1.13
Trem1-202ENSMUST00000113251 Slx4Q6P1D7 1565 aa22.13■■□□□ 1.13
Trem1-202ENSMUST00000113251 Chd1P40201 1711 aa22.12■■□□□ 1.13
Trem1-202ENSMUST00000113251 AknaQ80VW7 1404 aa22.09■■□□□ 1.13
Trem1-202ENSMUST00000113251 Peg3Q3URU2 1571 aa22.07■■□□□ 1.12
Trem1-202ENSMUST00000113251 BlmO88700 1416 aa22.07■■□□□ 1.12
Trem1-202ENSMUST00000113251 Neo1P97798 1493 aa22.05■■□□□ 1.12
Trem1-202ENSMUST00000113251 Tiam1Q60610 1591 aa22.05■■□□□ 1.12
Trem1-202ENSMUST00000113251 Abcc1O35379 1528 aa22.04■■□□□ 1.12
Trem1-202ENSMUST00000113251 WrnO09053 1401 aa22.03■■□□□ 1.12
Trem1-202ENSMUST00000113251 Rrbp1Q99PL5 1605 aaKnown RBP22.03■■□□□ 1.12
Trem1-202ENSMUST00000113251 Aebp1Q640N1 1128 aa22.02■■□□□ 1.12
Trem1-202ENSMUST00000113251 CntlnA2AM05 1397 aa22.01■■□□□ 1.11
Trem1-202ENSMUST00000113251 Zcchc11B2RX14 1644 aaKnown RBP22■■□□□ 1.11
Trem1-202ENSMUST00000113251 Pabpn1Q8CCS6 302 aaKnown RBP21.99■■□□□ 1.11
Trem1-202ENSMUST00000113251 Ap3b1Q9Z1T1 1105 aa21.97■■□□□ 1.11
Trem1-202ENSMUST00000113251 Arhgef12Q8R4H2 1543 aaKnown RBP21.97■■□□□ 1.11
Trem1-202ENSMUST00000113251 Rapgef6Q5NCJ1 1609 aa21.97■■□□□ 1.11
Trem1-202ENSMUST00000113251 Gm14025A2AP89 1413 aa21.95■■□□□ 1.1
Trem1-202ENSMUST00000113251 Naip1Q9QWK5 1403 aa21.93■■□□□ 1.1
Trem1-202ENSMUST00000113251 Kif27Q7M6Z4 1394 aa21.93■■□□□ 1.1
Trem1-202ENSMUST00000113251 Pelp1Q9DBD5 1123 aaKnown RBP21.92■■□□□ 1.1
Trem1-202ENSMUST00000113251 Ccdc141E9Q8Q6 1531 aa21.88■■□□□ 1.09
Trem1-202ENSMUST00000113251 Jph4Q80WT0 628 aa21.87■■□□□ 1.09
Trem1-202ENSMUST00000113251 Ncoa2Q61026 1462 aa21.85■■□□□ 1.09
Trem1-202ENSMUST00000113251 Arhgap31A6X8Z5 1425 aa21.85■■□□□ 1.09
Trem1-202ENSMUST00000113251 Gapvd1Q6PAR5 1458 aa21.85■■□□□ 1.09
Trem1-202ENSMUST00000113251 Plekhg3Q4VAC9 1341 aa21.82■■□□□ 1.08
Trem1-202ENSMUST00000113251 Cep170Q6A065 1588 aa21.82■■□□□ 1.08
Trem1-202ENSMUST00000113251 Arhgef11Q68FM7 1552 aa21.82■■□□□ 1.08
Trem1-202ENSMUST00000113251 Gm1043A0A140LJC2 1431 aa21.82■■□□□ 1.08
Trem1-202ENSMUST00000113251 Mroh2aD3Z750 1679 aa21.8■■□□□ 1.08
Trem1-202ENSMUST00000113251 Ehmt2Q9Z148 1263 aaKnown RBP21.79■■□□□ 1.08
Trem1-202ENSMUST00000113251 Gcc2Q8CHG3 1679 aa21.79■■□□□ 1.08
Trem1-202ENSMUST00000113251 Cul7Q8VE73 1689 aa21.79■■□□□ 1.08
Trem1-202ENSMUST00000113251 Cdc42bpaQ3UU96 1719 aa21.78■■□□□ 1.08
Trem1-202ENSMUST00000113251 Ythdc2B2RR83 1445 aaKnown RBP21.77■■□□□ 1.08
Trem1-202ENSMUST00000113251 Kdm5bQ80Y84 1544 aa21.77■■□□□ 1.08
Trem1-202ENSMUST00000113251 Kiaa1210E9Q0C6 1637 aa21.72■■□□□ 1.07
Trem1-202ENSMUST00000113251 NhsB1AV60 1647 aa21.71■■□□□ 1.07
Trem1-202ENSMUST00000113251 Mug1P28665 1476 aa21.71■■□□□ 1.07
Trem1-202ENSMUST00000113251 Magi1Q6RHR9 1471 aa21.71■■□□□ 1.07
Trem1-202ENSMUST00000113251 Dhx57Q6P5D3 1388 aaKnown RBP21.7■■□□□ 1.06
Trem1-202ENSMUST00000113251 PtprtQ99M80 1454 aa21.7■■□□□ 1.06
Trem1-202ENSMUST00000113251 Col17a1Q07563 1470 aa21.69■■□□□ 1.06
Trem1-202ENSMUST00000113251 NexmifQ5DTT1 1515 aa21.68■■□□□ 1.06
Trem1-202ENSMUST00000113251 Lmod2Q3UHZ5 550 aa21.68■■□□□ 1.06
Trem1-202ENSMUST00000113251 Kiaa1551Q5DTW7 1521 aa21.67■■□□□ 1.06
Trem1-202ENSMUST00000113251 Lmtk2Q3TYD6 1471 aa21.67■■□□□ 1.06
Trem1-202ENSMUST00000113251 Fancd2Q80V62 1450 aa21.66■■□□□ 1.06
Trem1-202ENSMUST00000113251 Ncoa3O09000 1398 aa21.66■■□□□ 1.06
Trem1-202ENSMUST00000113251 AI481877A2ALV5 1481 aa21.65■■□□□ 1.06
Trem1-202ENSMUST00000113251 Prex2Q3LAC4 1598 aa21.64■■□□□ 1.05
Trem1-202ENSMUST00000113251 Wdr7Q920I9 1489 aa21.63■■□□□ 1.05
Trem1-202ENSMUST00000113251 Adgrl3Q80TS3 1537 aa21.62■■□□□ 1.05
Trem1-202ENSMUST00000113251 Igf1rQ60751 1373 aa21.62■■□□□ 1.05
Trem1-202ENSMUST00000113251 Mapkbp1Q6NS57 1503 aa21.61■■□□□ 1.05
Trem1-202ENSMUST00000113251 Fkbp15Q6P9Q6 1216 aaKnown RBP21.61■■□□□ 1.05
Trem1-202ENSMUST00000113251 Fam163aQ8CAA5 168 aa21.61■■□□□ 1.05
Trem1-202ENSMUST00000113251 Ak9G3UYQ4 1894 aa21.58■■□□□ 1.05
Trem1-202ENSMUST00000113251 UbtfP25976 765 aaKnown RBP21.57■■□□□ 1.04
Trem1-202ENSMUST00000113251 Fam208aQ69ZR9 1610 aaKnown RBP21.56■■□□□ 1.04
Trem1-202ENSMUST00000113251 Abca8bQ8K440 1620 aa21.56■■□□□ 1.04
Trem1-202ENSMUST00000113251 Gm156Q58A37 223 aa21.55■■□□□ 1.04
Trem1-202ENSMUST00000113251 Ccnb3Q810T2 1396 aa21.54■■□□□ 1.04
Trem1-202ENSMUST00000113251 Setbp1Q9Z180 1582 aa21.52■■□□□ 1.04
Trem1-202ENSMUST00000113251 Lrrc9Q8CDN9 1456 aa21.51■■□□□ 1.03
Trem1-202ENSMUST00000113251 Rnf17Q99MV7 1640 aa21.5■■□□□ 1.03
Retrieved 100 of 22,080 RNA–protein pairs in 15.3 ms