RNA–Protein interactions for RNA: ENSMUST00000113251.9

Trem1-202, Transcript of Triggering receptor expressed on myeloid cells 1, mousemouse

TSL 1 (best) BASIC

Gene Trem1, Length 2,077 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1-202ENSMUST00000113251 Gm35339A0A140LHH9 1649 aa30.73■■■□□ 2.51
Trem1-202ENSMUST00000113251 NischQ80TM9 1593 aa30.45■■■□□ 2.47
Trem1-202ENSMUST00000113251 Abcc9P70170 1546 aa29.56■■■□□ 2.32
Trem1-202ENSMUST00000113251 Abcc8B2RUS7 1588 aa29.24■■■□□ 2.27
Trem1-202ENSMUST00000113251 ScribQ80U72 1612 aa27.87■■■□□ 2.05
Trem1-202ENSMUST00000113251 Dcaf1Q80TR8 1506 aa27.19■■□□□ 1.94
Trem1-202ENSMUST00000113251 Kdm5dQ62240 1548 aa27.07■■□□□ 1.92
Trem1-202ENSMUST00000113251 NacadQ5SWP3 1504 aa27.05■■□□□ 1.92
Trem1-202ENSMUST00000113251 Rhox8Q6VSS7 320 aa26.76■■□□□ 1.87
Trem1-202ENSMUST00000113251 Rb1cc1Q9ESK9 1588 aa26.63■■□□□ 1.85
Trem1-202ENSMUST00000113251 Ccdc180J3QNE4 1664 aa26.58■■□□□ 1.85
Trem1-202ENSMUST00000113251 Sycp2Q9CUU3 1500 aa26.47■■□□□ 1.83
Trem1-202ENSMUST00000113251 Baz1aO88379 1555 aa26.3■■□□□ 1.8
Trem1-202ENSMUST00000113251 Crybg2B7ZCC2 1516 aa26.11■■□□□ 1.77
Trem1-202ENSMUST00000113251 BicraF8VPZ9 1578 aa26.01■■□□□ 1.75
Trem1-202ENSMUST00000113251 Rtl1Q7M732 1744 aa25.98■■□□□ 1.75
Trem1-202ENSMUST00000113251 Zcchc6Q5BLK4 1491 aaKnown RBP25.7■■□□□ 1.7
Trem1-202ENSMUST00000113251 Smarca2Q6DIC0 1577 aa25.6■■□□□ 1.69
Trem1-202ENSMUST00000113251 Pds5bQ4VA53 1446 aaKnown RBP25.15■■□□□ 1.62
Trem1-202ENSMUST00000113251 Smarca4Q3TKT4 1613 aaKnown RBP25.14■■□□□ 1.61
Trem1-202ENSMUST00000113251 Cecr2E9Q2Z1 1453 aa25.11■■□□□ 1.61
Trem1-202ENSMUST00000113251 Atad2bE9Q166 1460 aaKnown RBP25.03■■□□□ 1.6
Trem1-202ENSMUST00000113251 Ccdc136Q3TVA9 1136 aa24.9■■□□□ 1.58
Trem1-202ENSMUST00000113251 Iqgap2Q3UQ44 1575 aa24.9■■□□□ 1.58
Trem1-202ENSMUST00000113251 Brd4Q9ESU6 1400 aaKnown RBP24.88■■□□□ 1.57
Trem1-202ENSMUST00000113251 Cttnbp2B9EJA2 1648 aa24.82■■□□□ 1.56
Trem1-202ENSMUST00000113251 Synj1Q8CHC4 1574 aa24.76■■□□□ 1.55
Trem1-202ENSMUST00000113251 Thoc2B1AZI6 1594 aaKnown RBP24.76■■□□□ 1.55
Trem1-202ENSMUST00000113251 CftrP26361 1476 aa24.72■■□□□ 1.55
Trem1-202ENSMUST00000113251 Ercc6F8VPZ5 1481 aa24.67■■□□□ 1.54
Trem1-202ENSMUST00000113251 Trim41Q5NCC3 630 aa24.66■■□□□ 1.54
Trem1-202ENSMUST00000113251 Wdr62Q3U3T8 1523 aa24.58■■□□□ 1.52
Trem1-202ENSMUST00000113251 Frmpd1A2AKB4 1549 aa24.48■■□□□ 1.51
Trem1-202ENSMUST00000113251 Cc2d2aQ8CFW7 1633 aa24.37■■□□□ 1.49
Trem1-202ENSMUST00000113251 Unc13aQ4KUS2 1712 aa24.37■■□□□ 1.49
Trem1-202ENSMUST00000113251 Fam135aQ6NS59 1506 aa24.32■■□□□ 1.48
Trem1-202ENSMUST00000113251 Esf1Q3V1V3 845 aaKnown RBP24.26■■□□□ 1.47
Trem1-202ENSMUST00000113251 Phldb1Q6PDH0 1371 aaKnown RBP24.2■■□□□ 1.46
Trem1-202ENSMUST00000113251 Golga3P55937 1487 aa24.19■■□□□ 1.46
Trem1-202ENSMUST00000113251 Top2bQ64511 1612 aa24.19■■□□□ 1.46
Trem1-202ENSMUST00000113251 Baz1bQ9Z277 1479 aa24.15■■□□□ 1.46
Trem1-202ENSMUST00000113251 Dnajc5bQ9CQ94 199 aa24.14■■□□□ 1.45
Trem1-202ENSMUST00000113251 Cngb1E1AZ71 1325 aa23.98■■□□□ 1.43
Trem1-202ENSMUST00000113251 Lamc3Q9R0B6 1581 aa23.93■■□□□ 1.42
Trem1-202ENSMUST00000113251 Rsf1E9PWW9 1441 aaKnown RBP23.92■■□□□ 1.42
Trem1-202ENSMUST00000113251 TnnQ80Z71 1560 aa23.88■■□□□ 1.41
Trem1-202ENSMUST00000113251 Ubl4bQ9CQ84 188 aa23.87■■□□□ 1.41
Trem1-202ENSMUST00000113251 Fmn1Q05860 1466 aa23.84■■□□□ 1.41
Trem1-202ENSMUST00000113251 Kif15Q6P9L6 1387 aa23.78■■□□□ 1.4
Trem1-202ENSMUST00000113251 HrcG5E8J6 738 aa23.76■■□□□ 1.39
Trem1-202ENSMUST00000113251 Mrc2Q64449 1479 aa23.72■■□□□ 1.39
Trem1-202ENSMUST00000113251 Ccdc88bQ4QRL3 1481 aa23.64■■□□□ 1.37
Trem1-202ENSMUST00000113251 Cux2P70298 1426 aa23.63■■□□□ 1.37
Trem1-202ENSMUST00000113251 Camsap1A2AHC3 1581 aa23.57■■□□□ 1.36
Trem1-202ENSMUST00000113251 Ccdc18Q640L5 1455 aa23.56■■□□□ 1.36
Trem1-202ENSMUST00000113251 Cep164Q5DU05 1446 aa23.53■■□□□ 1.36
Trem1-202ENSMUST00000113251 Top2aQ01320 1528 aaKnown RBP23.52■■□□□ 1.36
Trem1-202ENSMUST00000113251 Chic1Q8CBW7 227 aa23.45■■□□□ 1.35
Trem1-202ENSMUST00000113251 Kif21aQ9QXL2 1672 aa23.44■■□□□ 1.34
Trem1-202ENSMUST00000113251 Npm1Q61937 292 aaKnown RBP23.4■■□□□ 1.34
Trem1-202ENSMUST00000113251 Il27Q8K3I6 234 aa23.29■■□□□ 1.32
Trem1-202ENSMUST00000113251 Grin2bQ01097 1482 aa23.26■■□□□ 1.31
Trem1-202ENSMUST00000113251 LrpprcQ6PB66 1392 aaKnown RBP23.26■■□□□ 1.31
Trem1-202ENSMUST00000113251 Lrriq1Q0P5X1 1673 aa23.22■■□□□ 1.31
Trem1-202ENSMUST00000113251 Crocc2F6XLV1 1638 aa23.2■■□□□ 1.31
Trem1-202ENSMUST00000113251 PogzQ8BZH4 1409 aaKnown RBP23.2■■□□□ 1.3
Trem1-202ENSMUST00000113251 NrkQ9R0G8 1455 aa23.19■■□□□ 1.3
Trem1-202ENSMUST00000113251 Dhx29Q6PGC1 1365 aaKnown RBP23.18■■□□□ 1.3
Trem1-202ENSMUST00000113251 Duox2A2AQ99 1517 aa23.11■■□□□ 1.29
Trem1-202ENSMUST00000113251 Shroom4Q1W617 1475 aa23.1■■□□□ 1.29
Trem1-202ENSMUST00000113251 Rpgrip1Q9EPQ2 1331 aa23.1■■□□□ 1.29
Trem1-202ENSMUST00000113251 Efcab5A0JP43 1406 aa23.07■■□□□ 1.28
Trem1-202ENSMUST00000113251 Rapgef2Q8CHG7 1496 aa23.01■■□□□ 1.27
Trem1-202ENSMUST00000113251 Urb2E9Q7L1 1524 aaKnown RBP23■■□□□ 1.27
Trem1-202ENSMUST00000113251 Gab3Q8BSM5 595 aa22.99■■□□□ 1.27
Trem1-202ENSMUST00000113251 Samd9lQ69Z37 1561 aa22.99■■□□□ 1.27
Trem1-202ENSMUST00000113251 PtprkP35822 1457 aa22.98■■□□□ 1.27
Trem1-202ENSMUST00000113251 Plb1Q3TTY0 1478 aa22.97■■□□□ 1.27
Trem1-202ENSMUST00000113251 Eif4g3Q80XI3 1579 aaKnown RBP22.92■■□□□ 1.26
Trem1-202ENSMUST00000113251 Pbrm1Q8BSQ9 1634 aaKnown RBP22.91■■□□□ 1.26
Trem1-202ENSMUST00000113251 Eif4g1Q6NZJ6 1600 aaKnown RBP22.9■■□□□ 1.26
Trem1-202ENSMUST00000113251 Ift140E9PY46 1464 aa22.89■■□□□ 1.26
Trem1-202ENSMUST00000113251 Npm2Q80W85 207 aa22.88■■□□□ 1.25
Trem1-202ENSMUST00000113251 Setd1bQ8CFT2 1985 aa22.86■■□□□ 1.25
Trem1-202ENSMUST00000113251 SynmQ70IV5 1561 aa22.83■■□□□ 1.25
Trem1-202ENSMUST00000113251 Cep162Q6ZQ06 1403 aa22.82■■□□□ 1.24
Trem1-202ENSMUST00000113251 Map3k1P53349 1493 aa22.81■■□□□ 1.24
Trem1-202ENSMUST00000113251 Mroh2bQ7M6Y6 1581 aa22.81■■□□□ 1.24
Trem1-202ENSMUST00000113251 Arhgap35Q91YM2 1499 aa22.77■■□□□ 1.24
Trem1-202ENSMUST00000113251 Disp1Q3TDN0 1521 aa22.75■■□□□ 1.23
Trem1-202ENSMUST00000113251 Gpatch8A2A6A1 1505 aa22.74■■□□□ 1.23
Trem1-202ENSMUST00000113251 Rad54l2Q99NG0 1466 aa22.71■■□□□ 1.23
Trem1-202ENSMUST00000113251 Zeb1Q64318 1117 aa22.7■■□□□ 1.23
Trem1-202ENSMUST00000113251 Rusc2Q80U22 1514 aa22.7■■□□□ 1.22
Trem1-202ENSMUST00000113251 AqrQ8CFQ3 1481 aaKnown RBP22.7■■□□□ 1.22
Trem1-202ENSMUST00000113251 Magi3Q9EQJ9 1476 aa22.7■■□□□ 1.22
Trem1-202ENSMUST00000113251 Grin2aP35436 1464 aa22.69■■□□□ 1.22
Trem1-202ENSMUST00000113251 Nup160Q9Z0W3 1402 aaKnown RBP22.68■■□□□ 1.22
Trem1-202ENSMUST00000113251 Pla2r1Q62028 1487 aa22.63■■□□□ 1.21
Trem1-202ENSMUST00000113251 Cc2d2bA0A286YDU8 1405 aa22.62■■□□□ 1.21
Retrieved 100 of 22,080 RNA–protein pairs in 75.1 ms