RNA–Protein interactions for RNA: ENSMUST00000112298.9

Ssh1-202, Transcript of Protein phosphatase Slingshot homolog 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ssh1, Length 5,584 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssh1-202ENSMUST00000112298 DekQ7TNV0 380 aaKnown RBP16.4■□□□□ 0.22
Ssh1-202ENSMUST00000112298 Trim44Q9QXA7 346 aa16.38■□□□□ 0.21
Ssh1-202ENSMUST00000112298 Rangap1P46061 589 aaKnown RBP16.37■□□□□ 0.21
Ssh1-202ENSMUST00000112298 Ubl4bQ9CQ84 188 aa16.37■□□□□ 0.21
Ssh1-202ENSMUST00000112298 Ythdc1E9Q5K9 736 aaKnown RBP16.36■□□□□ 0.21
Ssh1-202ENSMUST00000112298 Rb1cc1Q9ESK9 1588 aa16.36■□□□□ 0.21
Ssh1-202ENSMUST00000112298 Hsp90ab1P11499 724 aaKnown RBP16.33■□□□□ 0.21
Ssh1-202ENSMUST00000112298 CanxP35564 591 aaKnown RBP16.32■□□□□ 0.2
Ssh1-202ENSMUST00000112298 Setd5Q5XJV7 1441 aa16.31■□□□□ 0.2
Ssh1-202ENSMUST00000112298 Trim30dE9PWL0 497 aa16.26■□□□□ 0.19
Ssh1-202ENSMUST00000112298 Htatsf1Q8BGC0 757 aa16.25■□□□□ 0.19
Ssh1-202ENSMUST00000112298 Lmod3E9QA62 571 aa16.25■□□□□ 0.19
Ssh1-202ENSMUST00000112298 Ofd1Q80Z25 1017 aa16.24■□□□□ 0.19
Ssh1-202ENSMUST00000112298 Vsig10D3YX43 558 aa16.23■□□□□ 0.19
Ssh1-202ENSMUST00000112298 Rgl3Q3UYI5 709 aa16.21■□□□□ 0.19
Ssh1-202ENSMUST00000112298 Safb2Q80YR5 991 aaKnown RBP16.21■□□□□ 0.19
Ssh1-202ENSMUST00000112298 Cwc22Q8C5N3 908 aaKnown RBP16.2■□□□□ 0.18
Ssh1-202ENSMUST00000112298 PtmaP26350 111 aa16.2■□□□□ 0.18
Ssh1-202ENSMUST00000112298 IqubQ8CDK3 788 aa16.2■□□□□ 0.18
Ssh1-202ENSMUST00000112298 Trim26Q99PN3 545 aa16.19■□□□□ 0.18
Ssh1-202ENSMUST00000112298 Chmp4bQ9D8B3 224 aaKnown RBP16.19■□□□□ 0.18
Ssh1-202ENSMUST00000112298 Ccdc27Q3V036 639 aa16.17■□□□□ 0.18
Ssh1-202ENSMUST00000112298 Ppm1gQ61074 542 aa16.17■□□□□ 0.18
Ssh1-202ENSMUST00000112298 Plppr3Q7TPB0 716 aa16.17■□□□□ 0.18
Ssh1-202ENSMUST00000112298 Eea1Q8BL66 1411 aa16.12■□□□□ 0.17
Ssh1-202ENSMUST00000112298 P3h3Q8CG70 732 aa16.12■□□□□ 0.17
Ssh1-202ENSMUST00000112298 Card11Q8CIS0 1159 aa16.11■□□□□ 0.17
Ssh1-202ENSMUST00000112298 Zfp777B9EKF4 885 aa16.11■□□□□ 0.17
Ssh1-202ENSMUST00000112298 Map7O88735 730 aa16.11■□□□□ 0.17
Ssh1-202ENSMUST00000112298 Plcb2A3KGF7 1181 aa16.11■□□□□ 0.17
Ssh1-202ENSMUST00000112298 Srpk2O54781 681 aaKnown RBP16.11■□□□□ 0.17
Ssh1-202ENSMUST00000112298 Golga3P55937 1487 aa16.1■□□□□ 0.17
Ssh1-202ENSMUST00000112298 Mapk8ip3Q9ESN9 1337 aa16.1■□□□□ 0.17
Ssh1-202ENSMUST00000112298 Fam71e1A1L3C1 212 aa16.09■□□□□ 0.17
Ssh1-202ENSMUST00000112298 Rsf1E9PWW9 1441 aaKnown RBP16.09■□□□□ 0.17
Ssh1-202ENSMUST00000112298 Znf326O88291 580 aa16.07■□□□□ 0.16
Ssh1-202ENSMUST00000112298 Adam1bQ8R534 806 aa16.06■□□□□ 0.16
Ssh1-202ENSMUST00000112298 1700123L14RikQ3V2K7 440 aa16.06■□□□□ 0.16
Ssh1-202ENSMUST00000112298 Mbd3Q9Z2D8 285 aaKnown RBP16.06■□□□□ 0.16
Ssh1-202ENSMUST00000112298 Mroh3A0A1D5RM54 893 aa16.05■□□□□ 0.16
Ssh1-202ENSMUST00000112298 Aebp2Q9Z248 504 aaKnown RBP16.05■□□□□ 0.16
Ssh1-202ENSMUST00000112298 NudcO35685 332 aaKnown RBP16.05■□□□□ 0.16
Ssh1-202ENSMUST00000112298 Mia2Q91ZV0 1396 aa16.05■□□□□ 0.16
Ssh1-202ENSMUST00000112298 Exosc9Q9JHI7 438 aaKnown RBP16.04■□□□□ 0.16
Ssh1-202ENSMUST00000112298 Ccdc18Q640L5 1455 aa16.03■□□□□ 0.16
Ssh1-202ENSMUST00000112298 Iqcf3Q9D498 203 aa16.03■□□□□ 0.16
Ssh1-202ENSMUST00000112298 Gm20521D3Z5F7 333 aa16.03■□□□□ 0.16
Ssh1-202ENSMUST00000112298 Kdm2aP59997 1161 aa16.02■□□□□ 0.16
Ssh1-202ENSMUST00000112298 Grwd1Q810D6 446 aaKnown RBP16.01■□□□□ 0.15
Ssh1-202ENSMUST00000112298 Kif15Q6P9L6 1387 aa16.01■□□□□ 0.15
Ssh1-202ENSMUST00000112298 NacadQ5SWP3 1504 aa16.01■□□□□ 0.15
Ssh1-202ENSMUST00000112298 Mtus2Q3UHD3 1353 aa16■□□□□ 0.15
Ssh1-202ENSMUST00000112298 PnnO35691 725 aaKnown RBP16■□□□□ 0.15
Ssh1-202ENSMUST00000112298 Arid4bA2CG63 1314 aaKnown RBP15.99■□□□□ 0.15
Ssh1-202ENSMUST00000112298 Casc1Q6TDU8 730 aa15.99■□□□□ 0.15
Ssh1-202ENSMUST00000112298 Apbb1Q9QXJ1 710 aa15.97■□□□□ 0.15
Ssh1-202ENSMUST00000112298 Neurod2Q62414 383 aa15.96■□□□□ 0.15
Ssh1-202ENSMUST00000112298 Irx6Q9ER75 438 aa15.96■□□□□ 0.15
Ssh1-202ENSMUST00000112298 KnstrnQ9D9Z1 312 aaKnown RBP15.95■□□□□ 0.14
Ssh1-202ENSMUST00000112298 Baz1aO88379 1555 aa15.95■□□□□ 0.14
Ssh1-202ENSMUST00000112298 Ercc6F8VPZ5 1481 aa15.92■□□□□ 0.14
Ssh1-202ENSMUST00000112298 Pes1Q9EQ61 584 aaKnown RBP15.92■□□□□ 0.14
Ssh1-202ENSMUST00000112298 MccE9PWI3 1003 aa15.91■□□□□ 0.14
Ssh1-202ENSMUST00000112298 PtmsQ9D0J8 101 aaKnown RBP15.91■□□□□ 0.14
Ssh1-202ENSMUST00000112298 Gm6268A2A3U9 297 aa15.9■□□□□ 0.14
Ssh1-202ENSMUST00000112298 Arhgap27A2AB59 869 aa15.89■□□□□ 0.14
Ssh1-202ENSMUST00000112298 HnrnpuQ8VEK3 800 aaKnown RBP15.89■□□□□ 0.14
Ssh1-202ENSMUST00000112298 Stag3O70576 1240 aa15.89■□□□□ 0.13
Ssh1-202ENSMUST00000112298 Rwdd1Q9CQK7 243 aa15.89■□□□□ 0.13
Ssh1-202ENSMUST00000112298 Rrp7aQ9D1C9 280 aaKnown RBP15.89■□□□□ 0.13
Ssh1-202ENSMUST00000112298 Irx3P81067 507 aa15.88■□□□□ 0.13
Ssh1-202ENSMUST00000112298 Hsp90b1P08113 802 aaKnown RBP15.87■□□□□ 0.13
Ssh1-202ENSMUST00000112298 Tcerg1Q8CGF7 1100 aaKnown RBP15.86■□□□□ 0.13
Ssh1-202ENSMUST00000112298 Dbr1Q923B1 550 aa15.85■□□□□ 0.13
Ssh1-202ENSMUST00000112298 Gm973E9Q295 1059 aa15.85■□□□□ 0.13
Ssh1-202ENSMUST00000112298 AU015836B2RUM3 263 aa15.84■□□□□ 0.13
Ssh1-202ENSMUST00000112298 Wwc2Q6NXJ0 1187 aa15.84■□□□□ 0.13
Ssh1-202ENSMUST00000112298 Fhad1A6PWD2 1420 aa15.83■□□□□ 0.12
Ssh1-202ENSMUST00000112298 Pde3bQ61409 1100 aa15.81■□□□□ 0.12
Ssh1-202ENSMUST00000112298 B4galnt3Q6L8S8 986 aa15.81■□□□□ 0.12
Ssh1-202ENSMUST00000112298 Stk24Q99KH8 431 aa15.81■□□□□ 0.12
Ssh1-202ENSMUST00000112298 Armcx1Q9CX83 456 aa15.79■□□□□ 0.12
Ssh1-202ENSMUST00000112298 Calcoco2A2A6M5 331 aa15.78■□□□□ 0.12
Ssh1-202ENSMUST00000112298 Eif4g2Q62448 906 aaKnown RBP15.76■□□□□ 0.11
Ssh1-202ENSMUST00000112298 Sart3Q9JLI8 962 aaKnown RBP15.76■□□□□ 0.11
Ssh1-202ENSMUST00000112298 Dnai1Q8C0M8 701 aa15.75■□□□□ 0.11
Ssh1-202ENSMUST00000112298 EspnQ9ET47 871 aa15.75■□□□□ 0.11
Ssh1-202ENSMUST00000112298 1700019A02RikA0A087WPV9 146 aa15.75■□□□□ 0.11
Ssh1-202ENSMUST00000112298 Tnnt2P50752 301 aa15.75■□□□□ 0.11
Ssh1-202ENSMUST00000112298 Sh3bp5Q9Z131 463 aa15.75■□□□□ 0.11
Ssh1-202ENSMUST00000112298 Chmp5Q9D7S9 219 aa15.74■□□□□ 0.11
Ssh1-202ENSMUST00000112298 Spryd3E9Q9B3 442 aa15.73■□□□□ 0.11
Ssh1-202ENSMUST00000112298 Dnttip2Q8R2M2 758 aaKnown RBP15.73■□□□□ 0.11
Ssh1-202ENSMUST00000112298 Supt16hQ920B9 1047 aa15.73■□□□□ 0.11
Ssh1-202ENSMUST00000112298 Rtn4Q99P72 1162 aaKnown RBP15.73■□□□□ 0.11
Ssh1-202ENSMUST00000112298 NgefQ8CHT1 710 aa15.72■□□□□ 0.11
Ssh1-202ENSMUST00000112298 Erich6bQ9D4S6 220 aa15.72■□□□□ 0.11
Ssh1-202ENSMUST00000112298 Tmf1B9EKI3 1091 aa15.71■□□□□ 0.11
Ssh1-202ENSMUST00000112298 Hspa5P20029 655 aaKnown RBP15.71■□□□□ 0.11
Ssh1-202ENSMUST00000112298 Rtf1A2AQ19 715 aaKnown RBP15.71■□□□□ 0.11
Retrieved 100 of 22,080 RNA–protein pairs in 30.1 ms