RNA–Protein interactions for RNA: ENSMUST00000111983.8

Hoxd3-203, Transcript of Homeobox protein Hox-D3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hoxd3, Length 2,968 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3-203ENSMUST00000111983 Npm2Q80W85 207 aa20.87■□□□□ 0.93
Hoxd3-203ENSMUST00000111983 NrkQ9R0G8 1455 aa20.86■□□□□ 0.93
Hoxd3-203ENSMUST00000111983 UbtfP25976 765 aaKnown RBP20.86■□□□□ 0.93
Hoxd3-203ENSMUST00000111983 Shroom4Q1W617 1475 aa20.84■□□□□ 0.93
Hoxd3-203ENSMUST00000111983 Hdac5Q9Z2V6 1113 aa20.84■□□□□ 0.93
Hoxd3-203ENSMUST00000111983 Npm1Q61937 292 aaKnown RBP20.81■□□□□ 0.92
Hoxd3-203ENSMUST00000111983 Arhgap35Q91YM2 1499 aa20.79■□□□□ 0.92
Hoxd3-203ENSMUST00000111983 Myt1lP97500 1187 aa20.78■□□□□ 0.92
Hoxd3-203ENSMUST00000111983 Ap3b1Q9Z1T1 1105 aa20.78■□□□□ 0.92
Hoxd3-203ENSMUST00000111983 Pelp1Q9DBD5 1123 aaKnown RBP20.76■□□□□ 0.91
Hoxd3-203ENSMUST00000111983 Baz1bQ9Z277 1479 aa20.76■□□□□ 0.91
Hoxd3-203ENSMUST00000111983 LrpprcQ6PB66 1392 aaKnown RBP20.75■□□□□ 0.91
Hoxd3-203ENSMUST00000111983 Mrc2Q64449 1479 aa20.73■□□□□ 0.91
Hoxd3-203ENSMUST00000111983 PogzQ8BZH4 1409 aaKnown RBP20.7■□□□□ 0.9
Hoxd3-203ENSMUST00000111983 Nolc1E9Q5C9 702 aaKnown RBP20.7■□□□□ 0.9
Hoxd3-203ENSMUST00000111983 Duox2A2AQ99 1517 aa20.66■□□□□ 0.9
Hoxd3-203ENSMUST00000111983 Kif21aQ9QXL2 1672 aa20.66■□□□□ 0.9
Hoxd3-203ENSMUST00000111983 Efcab5A0JP43 1406 aa20.64■□□□□ 0.89
Hoxd3-203ENSMUST00000111983 Dhx29Q6PGC1 1365 aaKnown RBP20.63■□□□□ 0.89
Hoxd3-203ENSMUST00000111983 Mroh2bQ7M6Y6 1581 aa20.63■□□□□ 0.89
Hoxd3-203ENSMUST00000111983 Map3k1P53349 1493 aa20.62■□□□□ 0.89
Hoxd3-203ENSMUST00000111983 Znf710Q3U288 666 aa20.58■□□□□ 0.89
Hoxd3-203ENSMUST00000111983 Fgd1P52734 960 aa20.57■□□□□ 0.88
Hoxd3-203ENSMUST00000111983 Supt16hQ920B9 1047 aa20.57■□□□□ 0.88
Hoxd3-203ENSMUST00000111983 Samd9lQ69Z37 1561 aa20.56■□□□□ 0.88
Hoxd3-203ENSMUST00000111983 Crocc2F6XLV1 1638 aa20.53■□□□□ 0.88
Hoxd3-203ENSMUST00000111983 Ttbk1Q6PCN3 1308 aa20.53■□□□□ 0.88
Hoxd3-203ENSMUST00000111983 Clip1Q922J3 1391 aa20.51■□□□□ 0.87
Hoxd3-203ENSMUST00000111983 Calr4Q3TQS0 420 aa20.49■□□□□ 0.87
Hoxd3-203ENSMUST00000111983 AqrQ8CFQ3 1481 aaKnown RBP20.47■□□□□ 0.87
Hoxd3-203ENSMUST00000111983 Upf2A2AT37 1269 aaKnown RBP20.45■□□□□ 0.86
Hoxd3-203ENSMUST00000111983 Gtf3c3Q3TMP1 882 aa20.45■□□□□ 0.86
Hoxd3-203ENSMUST00000111983 SynmQ70IV5 1561 aa20.43■□□□□ 0.86
Hoxd3-203ENSMUST00000111983 Pknox2Q8BG99 474 aa20.43■□□□□ 0.86
Hoxd3-203ENSMUST00000111983 NrdcQ8BHG1 1161 aa20.43■□□□□ 0.86
Hoxd3-203ENSMUST00000111983 Rad54l2Q99NG0 1466 aa20.43■□□□□ 0.86
Hoxd3-203ENSMUST00000111983 Arap1Q4LDD4 1452 aa20.42■□□□□ 0.86
Hoxd3-203ENSMUST00000111983 Stra8P70278 393 aa20.42■□□□□ 0.86
Hoxd3-203ENSMUST00000111983 Eea1Q8BL66 1411 aa20.42■□□□□ 0.86
Hoxd3-203ENSMUST00000111983 Plb1Q3TTY0 1478 aa20.4■□□□□ 0.86
Hoxd3-203ENSMUST00000111983 Ankrd26Q811D2 1581 aa20.39■□□□□ 0.85
Hoxd3-203ENSMUST00000111983 Carmil1Q6EDY6 1374 aa20.38■□□□□ 0.85
Hoxd3-203ENSMUST00000111983 Setd5Q5XJV7 1441 aa20.37■□□□□ 0.85
Hoxd3-203ENSMUST00000111983 Urb2E9Q7L1 1524 aaKnown RBP20.36■□□□□ 0.85
Hoxd3-203ENSMUST00000111983 Plcd4Q8K3R3 807 aa20.36■□□□□ 0.85
Hoxd3-203ENSMUST00000111983 Cux1P53564 1515 aa20.35■□□□□ 0.85
Hoxd3-203ENSMUST00000111983 Erich3F6QRE9 1637 aa20.34■□□□□ 0.85
Hoxd3-203ENSMUST00000111983 Plekhg3Q4VAC9 1341 aa20.33■□□□□ 0.84
Hoxd3-203ENSMUST00000111983 Arhgef5E9Q7D5 1581 aa20.32■□□□□ 0.84
Hoxd3-203ENSMUST00000111983 Ccdc27Q3V036 639 aa20.31■□□□□ 0.84
Hoxd3-203ENSMUST00000111983 Magi3Q9EQJ9 1476 aa20.3■□□□□ 0.84
Hoxd3-203ENSMUST00000111983 Rpap1Q80TE0 1409 aa20.29■□□□□ 0.84
Hoxd3-203ENSMUST00000111983 Pla2r1Q62028 1487 aa20.29■□□□□ 0.84
Hoxd3-203ENSMUST00000111983 Lrriq1Q0P5X1 1673 aa20.28■□□□□ 0.84
Hoxd3-203ENSMUST00000111983 Disp1Q3TDN0 1521 aa20.28■□□□□ 0.84
Hoxd3-203ENSMUST00000111983 Irx3P81067 507 aa20.26■□□□□ 0.83
Hoxd3-203ENSMUST00000111983 Ppp4r2Q0VGB7 417 aa20.25■□□□□ 0.83
Hoxd3-203ENSMUST00000111983 Setd1bQ8CFT2 1985 aa20.25■□□□□ 0.83
Hoxd3-203ENSMUST00000111983 Ccdc9Q8VC31 543 aaKnown RBP20.24■□□□□ 0.83
Hoxd3-203ENSMUST00000111983 Lmo7E9PYF4 1699 aaKnown RBP20.24■□□□□ 0.83
Hoxd3-203ENSMUST00000111983 Pcf11G3X9Z4 1553 aa20.24■□□□□ 0.83
Hoxd3-203ENSMUST00000111983 Grin2aP35436 1464 aa20.23■□□□□ 0.83
Hoxd3-203ENSMUST00000111983 Wdr43Q6ZQL4 677 aaKnown RBP20.21■□□□□ 0.83
Hoxd3-203ENSMUST00000111983 Ncapd3Q6ZQK0 1506 aa20.2■□□□□ 0.82
Hoxd3-203ENSMUST00000111983 Tiam1Q60610 1591 aa20.2■□□□□ 0.82
Hoxd3-203ENSMUST00000111983 Pak3Q61036 559 aa20.19■□□□□ 0.82
Hoxd3-203ENSMUST00000111983 EprsQ8CGC7 1512 aaKnown RBP20.19■□□□□ 0.82
Hoxd3-203ENSMUST00000111983 Polr1aO35134 1717 aaKnown RBP20.18■□□□□ 0.82
Hoxd3-203ENSMUST00000111983 Fyco1Q8VDC1 1437 aa20.17■□□□□ 0.82
Hoxd3-203ENSMUST00000111983 Ift140E9PY46 1464 aa20.16■□□□□ 0.82
Hoxd3-203ENSMUST00000111983 Naip1Q9QWK5 1403 aa20.16■□□□□ 0.82
Hoxd3-203ENSMUST00000111983 Washc2Q6PGL7 1334 aa20.15■□□□□ 0.82
Hoxd3-203ENSMUST00000111983 Slx4Q6P1D7 1565 aa20.14■□□□□ 0.82
Hoxd3-203ENSMUST00000111983 Eid3Q3V124 375 aa20.12■□□□□ 0.81
Hoxd3-203ENSMUST00000111983 Nup160Q9Z0W3 1402 aaKnown RBP20.12■□□□□ 0.81
Hoxd3-203ENSMUST00000111983 WizO88286 1684 aaKnown RBP20.1■□□□□ 0.81
Hoxd3-203ENSMUST00000111983 CadpsQ80TJ1 1355 aa20.09■□□□□ 0.81
Hoxd3-203ENSMUST00000111983 Adamts12Q811B3 1600 aa20.09■□□□□ 0.81
Hoxd3-203ENSMUST00000111983 Pbrm1Q8BSQ9 1634 aaKnown RBP20.09■□□□□ 0.81
Hoxd3-203ENSMUST00000111983 Liat1Q810M6 228 aa20.09■□□□□ 0.81
Hoxd3-203ENSMUST00000111983 Gpatch8A2A6A1 1505 aa20.09■□□□□ 0.81
Hoxd3-203ENSMUST00000111983 Abca5Q8K448 1642 aa20.07■□□□□ 0.8
Hoxd3-203ENSMUST00000111983 Egfem1Q8C088 590 aa20.07■□□□□ 0.8
Hoxd3-203ENSMUST00000111983 Hsp90aa1P07901 733 aaKnown RBP20.06■□□□□ 0.8
Hoxd3-203ENSMUST00000111983 Aebp1Q640N1 1128 aa20.06■□□□□ 0.8
Hoxd3-203ENSMUST00000111983 CntlnA2AM05 1397 aa20.05■□□□□ 0.8
Hoxd3-203ENSMUST00000111983 Ipo4Q8VI75 1082 aa20.05■□□□□ 0.8
Hoxd3-203ENSMUST00000111983 BlmO88700 1416 aa20.05■□□□□ 0.8
Hoxd3-203ENSMUST00000111983 Gm7298A0A0N4SVU1 1476 aa20.05■□□□□ 0.8
Hoxd3-203ENSMUST00000111983 PxdnQ3UQ28 1475 aa20.03■□□□□ 0.8
Hoxd3-203ENSMUST00000111983 Abca16E9PWJ7 1678 aa20.02■□□□□ 0.79
Hoxd3-203ENSMUST00000111983 Peg3Q3URU2 1571 aa20.01■□□□□ 0.79
Hoxd3-203ENSMUST00000111983 Lmod2Q3UHZ5 550 aa19.99■□□□□ 0.79
Hoxd3-203ENSMUST00000111983 TchhA0A0B4J1F9 1599 aa19.97■□□□□ 0.79
Hoxd3-203ENSMUST00000111983 Cc2d2bA0A286YDU8 1405 aa19.96■□□□□ 0.79
Hoxd3-203ENSMUST00000111983 Soga1E1U8D0 1418 aa19.96■□□□□ 0.79
Hoxd3-203ENSMUST00000111983 Gm1043A0A140LJC2 1431 aa19.96■□□□□ 0.79
Hoxd3-203ENSMUST00000111983 Kdm5bQ80Y84 1544 aa19.94■□□□□ 0.78
Hoxd3-203ENSMUST00000111983 Eif4g3Q80XI3 1579 aaKnown RBP19.93■□□□□ 0.78
Hoxd3-203ENSMUST00000111983 Ipo9Q91YE6 1041 aa19.93■□□□□ 0.78
Retrieved 100 of 22,080 RNA–protein pairs in 14 ms