RNA–Protein interactions for RNA: ENSMUST00000111983.8

Hoxd3-203, Transcript of Homeobox protein Hox-D3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hoxd3, Length 2,968 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3-203ENSMUST00000111983 NischQ80TM9 1593 aa27.32■■□□□ 1.96
Hoxd3-203ENSMUST00000111983 Gm35339A0A140LHH9 1649 aa27.19■■□□□ 1.94
Hoxd3-203ENSMUST00000111983 Abcc9P70170 1546 aa26.52■■□□□ 1.84
Hoxd3-203ENSMUST00000111983 Abcc8B2RUS7 1588 aa26.13■■□□□ 1.77
Hoxd3-203ENSMUST00000111983 Rpgrip1Q9EPQ2 1331 aa25.18■■□□□ 1.62
Hoxd3-203ENSMUST00000111983 ScribQ80U72 1612 aa24.69■■□□□ 1.54
Hoxd3-203ENSMUST00000111983 Rhox8Q6VSS7 320 aa24.62■■□□□ 1.53
Hoxd3-203ENSMUST00000111983 Dcaf1Q80TR8 1506 aa24.23■■□□□ 1.47
Hoxd3-203ENSMUST00000111983 Acin1Q9JIX8 1338 aaKnown RBP24.23■■□□□ 1.47
Hoxd3-203ENSMUST00000111983 Rtl1Q7M732 1744 aa24.11■■□□□ 1.45
Hoxd3-203ENSMUST00000111983 Kdm5dQ62240 1548 aa24.06■■□□□ 1.44
Hoxd3-203ENSMUST00000111983 Pcgf6Q99NA9 353 aa24.06■■□□□ 1.44
Hoxd3-203ENSMUST00000111983 Ccdc180J3QNE4 1664 aa23.98■■□□□ 1.43
Hoxd3-203ENSMUST00000111983 NacadQ5SWP3 1504 aa23.9■■□□□ 1.42
Hoxd3-203ENSMUST00000111983 Rb1cc1Q9ESK9 1588 aa23.9■■□□□ 1.42
Hoxd3-203ENSMUST00000111983 Baz1aO88379 1555 aa23.6■■□□□ 1.37
Hoxd3-203ENSMUST00000111983 Ehmt2Q9Z148 1263 aaKnown RBP23.48■■□□□ 1.35
Hoxd3-203ENSMUST00000111983 Sycp2Q9CUU3 1500 aa23.43■■□□□ 1.34
Hoxd3-203ENSMUST00000111983 Neurod1Q60867 357 aa23.29■■□□□ 1.32
Hoxd3-203ENSMUST00000111983 Crybg2B7ZCC2 1516 aa23.26■■□□□ 1.31
Hoxd3-203ENSMUST00000111983 Supt5hO55201 1082 aaKnown RBP23.25■■□□□ 1.31
Hoxd3-203ENSMUST00000111983 Zcchc6Q5BLK4 1491 aaKnown RBP23.25■■□□□ 1.31
Hoxd3-203ENSMUST00000111983 Trim41Q5NCC3 630 aa23.2■■□□□ 1.3
Hoxd3-203ENSMUST00000111983 Las1lA2BE28 776 aaKnown RBP23.19■■□□□ 1.3
Hoxd3-203ENSMUST00000111983 Smarca2Q6DIC0 1577 aa23.04■■□□□ 1.28
Hoxd3-203ENSMUST00000111983 BicraF8VPZ9 1578 aa23.03■■□□□ 1.28
Hoxd3-203ENSMUST00000111983 Ccdc136Q3TVA9 1136 aa22.95■■□□□ 1.26
Hoxd3-203ENSMUST00000111983 1700123L14RikQ3V2K7 440 aa22.86■■□□□ 1.25
Hoxd3-203ENSMUST00000111983 Myt1Q8CFC2 1127 aa22.84■■□□□ 1.25
Hoxd3-203ENSMUST00000111983 CenpbP27790 599 aa22.8■■□□□ 1.24
Hoxd3-203ENSMUST00000111983 Cecr2E9Q2Z1 1453 aa22.66■■□□□ 1.22
Hoxd3-203ENSMUST00000111983 HrcG5E8J6 738 aa22.65■■□□□ 1.22
Hoxd3-203ENSMUST00000111983 Csrnp3P59055 597 aa22.56■■□□□ 1.2
Hoxd3-203ENSMUST00000111983 DiexfQ8BTT6 772 aaKnown RBP22.53■■□□□ 1.2
Hoxd3-203ENSMUST00000111983 Anks4bQ8K3X6 423 aa22.51■■□□□ 1.19
Hoxd3-203ENSMUST00000111983 Brd4Q9ESU6 1400 aaKnown RBP22.37■■□□□ 1.17
Hoxd3-203ENSMUST00000111983 Zeb1Q64318 1117 aa22.35■■□□□ 1.17
Hoxd3-203ENSMUST00000111983 Synj1Q8CHC4 1574 aa22.33■■□□□ 1.17
Hoxd3-203ENSMUST00000111983 Cngb1E1AZ71 1325 aa22.31■■□□□ 1.16
Hoxd3-203ENSMUST00000111983 Aplp2Q06335 707 aa22.29■■□□□ 1.16
Hoxd3-203ENSMUST00000111983 Smarca4Q3TKT4 1613 aaKnown RBP22.28■■□□□ 1.16
Hoxd3-203ENSMUST00000111983 Sall2Q9QX96 1004 aa22.24■■□□□ 1.15
Hoxd3-203ENSMUST00000111983 CftrP26361 1476 aa22.24■■□□□ 1.15
Hoxd3-203ENSMUST00000111983 Bcl11aQ9QYE3 773 aa22.2■■□□□ 1.15
Hoxd3-203ENSMUST00000111983 Cttnbp2B9EJA2 1648 aa22.14■■□□□ 1.13
Hoxd3-203ENSMUST00000111983 Iqgap2Q3UQ44 1575 aa22.05■■□□□ 1.12
Hoxd3-203ENSMUST00000111983 Atad2bE9Q166 1460 aaKnown RBP22.05■■□□□ 1.12
Hoxd3-203ENSMUST00000111983 Pds5bQ4VA53 1446 aaKnown RBP22.01■■□□□ 1.11
Hoxd3-203ENSMUST00000111983 NefmP08553 848 aa22.01■■□□□ 1.11
Hoxd3-203ENSMUST00000111983 Golga3P55937 1487 aa21.99■■□□□ 1.11
Hoxd3-203ENSMUST00000111983 Esf1Q3V1V3 845 aaKnown RBP21.9■■□□□ 1.1
Hoxd3-203ENSMUST00000111983 Gm38655A0A286YDK6 273 aa21.88■■□□□ 1.09
Hoxd3-203ENSMUST00000111983 Top2bQ64511 1612 aa21.88■■□□□ 1.09
Hoxd3-203ENSMUST00000111983 Cdk11bP24788 784 aaKnown RBP21.84■■□□□ 1.09
Hoxd3-203ENSMUST00000111983 Dnajc5bQ9CQ94 199 aa21.83■■□□□ 1.09
Hoxd3-203ENSMUST00000111983 Rsf1E9PWW9 1441 aaKnown RBP21.82■■□□□ 1.08
Hoxd3-203ENSMUST00000111983 Cep164Q5DU05 1446 aa21.8■■□□□ 1.08
Hoxd3-203ENSMUST00000111983 Chic1Q8CBW7 227 aa21.79■■□□□ 1.08
Hoxd3-203ENSMUST00000111983 Ccdc88bQ4QRL3 1481 aa21.79■■□□□ 1.08
Hoxd3-203ENSMUST00000111983 Nop58Q6DFW4 536 aaKnown RBP21.74■■□□□ 1.07
Hoxd3-203ENSMUST00000111983 Mier1Q5UAK0 511 aa21.71■■□□□ 1.07
Hoxd3-203ENSMUST00000111983 Frmpd1A2AKB4 1549 aa21.71■■□□□ 1.07
Hoxd3-203ENSMUST00000111983 Wdr62Q3U3T8 1523 aa21.7■■□□□ 1.06
Hoxd3-203ENSMUST00000111983 Cc2d2aQ8CFW7 1633 aa21.69■■□□□ 1.06
Hoxd3-203ENSMUST00000111983 PrkcshO08795 521 aa21.66■■□□□ 1.06
Hoxd3-203ENSMUST00000111983 Wdr66E9Q743 1299 aa21.61■■□□□ 1.05
Hoxd3-203ENSMUST00000111983 Fam71e1A1L3C1 212 aa21.59■■□□□ 1.05
Hoxd3-203ENSMUST00000111983 Ercc6F8VPZ5 1481 aa21.58■■□□□ 1.05
Hoxd3-203ENSMUST00000111983 Thoc2B1AZI6 1594 aaKnown RBP21.54■■□□□ 1.04
Hoxd3-203ENSMUST00000111983 Aebp2Q9Z248 504 aaKnown RBP21.54■■□□□ 1.04
Hoxd3-203ENSMUST00000111983 Unc13aQ4KUS2 1712 aa21.52■■□□□ 1.03
Hoxd3-203ENSMUST00000111983 Fmn1Q05860 1466 aa21.51■■□□□ 1.03
Hoxd3-203ENSMUST00000111983 ClspnQ80YR7 1315 aa21.47■■□□□ 1.03
Hoxd3-203ENSMUST00000111983 Ifnlr1Q8CGK5 535 aa21.43■■□□□ 1.02
Hoxd3-203ENSMUST00000111983 Gab3Q8BSM5 595 aa21.42■■□□□ 1.02
Hoxd3-203ENSMUST00000111983 TnnQ80Z71 1560 aa21.39■■□□□ 1.02
Hoxd3-203ENSMUST00000111983 Top2aQ01320 1528 aaKnown RBP21.36■■□□□ 1.01
Hoxd3-203ENSMUST00000111983 Lamc3Q9R0B6 1581 aa21.32■■□□□ 1
Hoxd3-203ENSMUST00000111983 Mapk8ip2Q9ERE9 830 aa21.32■■□□□ 1
Hoxd3-203ENSMUST00000111983 Ppargc1bQ8VHJ7 1014 aa21.32■■□□□ 1
Hoxd3-203ENSMUST00000111983 Amer1Q7TS75 1132 aa21.28■■□□□ 1
Hoxd3-203ENSMUST00000111983 Il27Q8K3I6 234 aa21.27■■□□□ 1
Hoxd3-203ENSMUST00000111983 Phldb1Q6PDH0 1371 aaKnown RBP21.27■■□□□ 1
Hoxd3-203ENSMUST00000111983 SafbD3YXK2 937 aaKnown RBP21.25■□□□□ 0.99
Hoxd3-203ENSMUST00000111983 Kif15Q6P9L6 1387 aa21.23■□□□□ 0.99
Hoxd3-203ENSMUST00000111983 Fam135aQ6NS59 1506 aa21.22■□□□□ 0.99
Hoxd3-203ENSMUST00000111983 Hnrnpul2Q00PI9 745 aaKnown RBP21.17■□□□□ 0.98
Hoxd3-203ENSMUST00000111983 Rapgef2Q8CHG7 1496 aa21.13■□□□□ 0.97
Hoxd3-203ENSMUST00000111983 Ubl4bQ9CQ84 188 aa21.12■□□□□ 0.97
Hoxd3-203ENSMUST00000111983 Tnnt3Q9QZ47 272 aa21.09■□□□□ 0.97
Hoxd3-203ENSMUST00000111983 Camsap1A2AHC3 1581 aa21.08■□□□□ 0.97
Hoxd3-203ENSMUST00000111983 Cux2P70298 1426 aa21■□□□□ 0.95
Hoxd3-203ENSMUST00000111983 Rtl5Q5DTT4 599 aa20.97■□□□□ 0.95
Hoxd3-203ENSMUST00000111983 Anp32aO35381 247 aa20.97■□□□□ 0.95
Hoxd3-203ENSMUST00000111983 Cep162Q6ZQ06 1403 aa20.96■□□□□ 0.95
Hoxd3-203ENSMUST00000111983 PtprkP35822 1457 aa20.96■□□□□ 0.95
Hoxd3-203ENSMUST00000111983 Ccdc18Q640L5 1455 aa20.95■□□□□ 0.94
Hoxd3-203ENSMUST00000111983 Eif4g1Q6NZJ6 1600 aaKnown RBP20.92■□□□□ 0.94
Hoxd3-203ENSMUST00000111983 Grin2bQ01097 1482 aa20.89■□□□□ 0.93
Hoxd3-203ENSMUST00000111983 TonslQ6NZL6 1363 aa20.88■□□□□ 0.93
Retrieved 100 of 22,080 RNA–protein pairs in 46.3 ms