RNA–Protein interactions for RNA: ENSMUST00000102843.9

Rtn4-205, Transcript of Reticulon-4, mousemouse

TSL 1 (best) BASIC

Gene Rtn4, Length 4,618 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4-205ENSMUST00000102843 Ccdc88bQ4QRL3 1481 aa18.7■□□□□ 0.58
Rtn4-205ENSMUST00000102843 Upf2A2AT37 1269 aaKnown RBP18.68■□□□□ 0.58
Rtn4-205ENSMUST00000102843 Wdr43Q6ZQL4 677 aaKnown RBP18.66■□□□□ 0.58
Rtn4-205ENSMUST00000102843 Ccdc18Q640L5 1455 aa18.66■□□□□ 0.58
Rtn4-205ENSMUST00000102843 4930567H17RikQ3V0K5 233 aa18.66■□□□□ 0.58
Rtn4-205ENSMUST00000102843 1700123L14RikQ3V2K7 440 aa18.62■□□□□ 0.57
Rtn4-205ENSMUST00000102843 Rad21Q61550 635 aaKnown RBP18.62■□□□□ 0.57
Rtn4-205ENSMUST00000102843 Rgl3Q3UYI5 709 aa18.62■□□□□ 0.57
Rtn4-205ENSMUST00000102843 Ercc6F8VPZ5 1481 aa18.56■□□□□ 0.56
Rtn4-205ENSMUST00000102843 DiexfQ8BTT6 772 aaKnown RBP18.55■□□□□ 0.56
Rtn4-205ENSMUST00000102843 Cep162Q6ZQ06 1403 aa18.55■□□□□ 0.56
Rtn4-205ENSMUST00000102843 Gm13695A2AK44 830 aa18.53■□□□□ 0.56
Rtn4-205ENSMUST00000102843 ArxO35085 564 aa18.51■□□□□ 0.55
Rtn4-205ENSMUST00000102843 Fmn1Q05860 1466 aa18.5■□□□□ 0.55
Rtn4-205ENSMUST00000102843 Mia2Q91ZV0 1396 aa18.47■□□□□ 0.55
Rtn4-205ENSMUST00000102843 Crybg2B7ZCC2 1516 aa18.47■□□□□ 0.55
Rtn4-205ENSMUST00000102843 Grwd1Q810D6 446 aaKnown RBP18.45■□□□□ 0.54
Rtn4-205ENSMUST00000102843 Ofd1Q80Z25 1017 aa18.45■□□□□ 0.54
Rtn4-205ENSMUST00000102843 Arhgap27A2AB59 869 aa18.44■□□□□ 0.54
Rtn4-205ENSMUST00000102843 Sycp2Q9CUU3 1500 aa18.44■□□□□ 0.54
Rtn4-205ENSMUST00000102843 Hspa5P20029 655 aaKnown RBP18.42■□□□□ 0.54
Rtn4-205ENSMUST00000102843 P3h3Q8CG70 732 aa18.42■□□□□ 0.54
Rtn4-205ENSMUST00000102843 Cwc22Q8C5N3 908 aaKnown RBP18.42■□□□□ 0.54
Rtn4-205ENSMUST00000102843 Card11Q8CIS0 1159 aa18.4■□□□□ 0.54
Rtn4-205ENSMUST00000102843 Rangap1P46061 589 aaKnown RBP18.4■□□□□ 0.54
Rtn4-205ENSMUST00000102843 CftrP26361 1476 aa18.38■□□□□ 0.53
Rtn4-205ENSMUST00000102843 Fam71e1A1L3C1 212 aa18.38■□□□□ 0.53
Rtn4-205ENSMUST00000102843 Pds5bQ4VA53 1446 aaKnown RBP18.37■□□□□ 0.53
Rtn4-205ENSMUST00000102843 Mtus2Q3UHD3 1353 aa18.37■□□□□ 0.53
Rtn4-205ENSMUST00000102843 Cecr2E9Q2Z1 1453 aa18.34■□□□□ 0.53
Rtn4-205ENSMUST00000102843 Kdm2aP59997 1161 aa18.32■□□□□ 0.52
Rtn4-205ENSMUST00000102843 Mroh3A0A1D5RM54 893 aa18.32■□□□□ 0.52
Rtn4-205ENSMUST00000102843 Smarca2Q6DIC0 1577 aa18.3■□□□□ 0.52
Rtn4-205ENSMUST00000102843 Aebp1Q640N1 1128 aa18.3■□□□□ 0.52
Rtn4-205ENSMUST00000102843 Rrp7aQ9D1C9 280 aaKnown RBP18.29■□□□□ 0.52
Rtn4-205ENSMUST00000102843 Plppr3Q7TPB0 716 aa18.27■□□□□ 0.51
Rtn4-205ENSMUST00000102843 Kif27Q7M6Z4 1394 aa18.26■□□□□ 0.51
Rtn4-205ENSMUST00000102843 SafbD3YXK2 937 aaKnown RBP18.24■□□□□ 0.51
Rtn4-205ENSMUST00000102843 Wwc2Q6NXJ0 1187 aa18.24■□□□□ 0.51
Rtn4-205ENSMUST00000102843 Pkd2O35245 966 aa18.23■□□□□ 0.51
Rtn4-205ENSMUST00000102843 Trim26Q99PN3 545 aa18.22■□□□□ 0.51
Rtn4-205ENSMUST00000102843 CanxP35564 591 aaKnown RBP18.22■□□□□ 0.51
Rtn4-205ENSMUST00000102843 Srpk2O54781 681 aaKnown RBP18.21■□□□□ 0.51
Rtn4-205ENSMUST00000102843 Fyco1Q8VDC1 1437 aa18.21■□□□□ 0.51
Rtn4-205ENSMUST00000102843 Gm20521D3Z5F7 333 aa18.2■□□□□ 0.5
Rtn4-205ENSMUST00000102843 Trim30dE9PWL0 497 aa18.2■□□□□ 0.5
Rtn4-205ENSMUST00000102843 Rapgef2Q8CHG7 1496 aa18.19■□□□□ 0.5
Rtn4-205ENSMUST00000102843 Hsp90aa1P07901 733 aaKnown RBP18.19■□□□□ 0.5
Rtn4-205ENSMUST00000102843 Sin3aQ60520 1274 aaKnown RBP18.18■□□□□ 0.5
Rtn4-205ENSMUST00000102843 CntlnA2AM05 1397 aa18.18■□□□□ 0.5
Rtn4-205ENSMUST00000102843 Synj1Q8CHC4 1574 aa18.17■□□□□ 0.5
Rtn4-205ENSMUST00000102843 Baz1bQ9Z277 1479 aa18.17■□□□□ 0.5
Rtn4-205ENSMUST00000102843 ScribQ80U72 1612 aa18.16■□□□□ 0.5
Rtn4-205ENSMUST00000102843 IqubQ8CDK3 788 aa18.16■□□□□ 0.5
Rtn4-205ENSMUST00000102843 Ccdc9Q8VC31 543 aaKnown RBP18.15■□□□□ 0.5
Rtn4-205ENSMUST00000102843 Cabp1Q9JLK7 227 aa18.14■□□□□ 0.49
Rtn4-205ENSMUST00000102843 Apbb1Q9QXJ1 710 aa18.14■□□□□ 0.49
Rtn4-205ENSMUST00000102843 Map4P27546 1125 aaKnown RBP18.13■□□□□ 0.49
Rtn4-205ENSMUST00000102843 Mphosph9A6H5Y1 991 aa18.13■□□□□ 0.49
Rtn4-205ENSMUST00000102843 Hsp90ab1P11499 724 aaKnown RBP18.13■□□□□ 0.49
Rtn4-205ENSMUST00000102843 Arhgap35Q91YM2 1499 aa18.12■□□□□ 0.49
Rtn4-205ENSMUST00000102843 Neurod2Q62414 383 aa18.12■□□□□ 0.49
Rtn4-205ENSMUST00000102843 Rundc1Q0VDN7 615 aa18.11■□□□□ 0.49
Rtn4-205ENSMUST00000102843 Fgd1P52734 960 aa18.1■□□□□ 0.49
Rtn4-205ENSMUST00000102843 Exosc9Q9JHI7 438 aaKnown RBP18.08■□□□□ 0.49
Rtn4-205ENSMUST00000102843 Cux2P70298 1426 aa18.08■□□□□ 0.48
Rtn4-205ENSMUST00000102843 Exoc6Q8R313 802 aa18.07■□□□□ 0.48
Rtn4-205ENSMUST00000102843 Stk24Q99KH8 431 aa18.07■□□□□ 0.48
Rtn4-205ENSMUST00000102843 Trak1Q6PD31 939 aa18.07■□□□□ 0.48
Rtn4-205ENSMUST00000102843 Safb2Q80YR5 991 aaKnown RBP18.07■□□□□ 0.48
Rtn4-205ENSMUST00000102843 Rpap1Q80TE0 1409 aa18.05■□□□□ 0.48
Rtn4-205ENSMUST00000102843 Carmil1Q6EDY6 1374 aa18.05■□□□□ 0.48
Rtn4-205ENSMUST00000102843 Ccdc27Q3V036 639 aa18.03■□□□□ 0.48
Rtn4-205ENSMUST00000102843 DekQ7TNV0 380 aaKnown RBP18.02■□□□□ 0.47
Rtn4-205ENSMUST00000102843 Atad2bE9Q166 1460 aaKnown RBP18.02■□□□□ 0.47
Rtn4-205ENSMUST00000102843 Mapk8ip3Q9ESN9 1337 aa18■□□□□ 0.47
Rtn4-205ENSMUST00000102843 Slc4a3P16283 1227 aa17.99■□□□□ 0.47
Rtn4-205ENSMUST00000102843 Stag3O70576 1240 aa17.99■□□□□ 0.47
Rtn4-205ENSMUST00000102843 Ppm1gQ61074 542 aa17.99■□□□□ 0.47
Rtn4-205ENSMUST00000102843 Dbr1Q923B1 550 aa17.97■□□□□ 0.47
Rtn4-205ENSMUST00000102843 Tcerg1Q8CGF7 1100 aaKnown RBP17.96■□□□□ 0.47
Rtn4-205ENSMUST00000102843 Zscan21Q07231 555 aa17.96■□□□□ 0.47
Rtn4-205ENSMUST00000102843 Ifit1bl1D3Z6F0 470 aa17.96■□□□□ 0.47
Rtn4-205ENSMUST00000102843 Rwdd1Q9CQK7 243 aa17.96■□□□□ 0.47
Rtn4-205ENSMUST00000102843 Smarca4Q3TKT4 1613 aaKnown RBP17.96■□□□□ 0.46
Rtn4-205ENSMUST00000102843 Phldb1Q6PDH0 1371 aaKnown RBP17.95■□□□□ 0.46
Rtn4-205ENSMUST00000102843 B4galnt3Q6L8S8 986 aa17.94■□□□□ 0.46
Rtn4-205ENSMUST00000102843 Vsig10D3YX43 558 aa17.94■□□□□ 0.46
Rtn4-205ENSMUST00000102843 Cnga1P29974 684 aa17.94■□□□□ 0.46
Rtn4-205ENSMUST00000102843 Mbd3Q9Z2D8 285 aaKnown RBP17.94■□□□□ 0.46
Rtn4-205ENSMUST00000102843 Fhad1A6PWD2 1420 aa17.92■□□□□ 0.46
Rtn4-205ENSMUST00000102843 Htatsf1Q8BGC0 757 aa17.92■□□□□ 0.46
Rtn4-205ENSMUST00000102843 Supt16hQ920B9 1047 aa17.92■□□□□ 0.46
Rtn4-205ENSMUST00000102843 Ccnb3Q810T2 1396 aa17.91■□□□□ 0.46
Rtn4-205ENSMUST00000102843 Cttnbp2B9EJA2 1648 aa17.91■□□□□ 0.46
Rtn4-205ENSMUST00000102843 Mak16Q8BGS0 296 aaKnown RBP17.9■□□□□ 0.46
Rtn4-205ENSMUST00000102843 LrpprcQ6PB66 1392 aaKnown RBP17.9■□□□□ 0.46
Rtn4-205ENSMUST00000102843 Tmf1B9EKI3 1091 aa17.89■□□□□ 0.45
Rtn4-205ENSMUST00000102843 Gm6268A2A3U9 297 aa17.89■□□□□ 0.45
Rtn4-205ENSMUST00000102843 Arid4bA2CG63 1314 aaKnown RBP17.88■□□□□ 0.45
Retrieved 100 of 22,080 RNA–protein pairs in 226.9 ms